Caenorhabditis briggsae (nematode): CBG_04630
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Entry
CBG_04630 CDS
T01054
Symbol
Cbr-cyn-1
Name
(RefSeq) Protein CBR-CYN-1
KO
K03767
peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:
5.2.1.8
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CBG_04630 (Cbr-cyn-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cbr03110
]
CBG_04630 (Cbr-cyn-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_04630 (Cbr-cyn-1)
Enzymes [BR:
cbr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
CBG_04630 (Cbr-cyn-1)
Chaperones and folding catalysts [BR:
cbr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
CBG_04630 (Cbr-cyn-1)
Exosome [BR:
cbr04147
]
Exosomal proteins
Proteins found in most exosomes
CBG_04630 (Cbr-cyn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
8579836
NCBI-ProteinID:
XP_002637839
WormBase:
CBG04630
UniProt:
A0AAE9A3H5
A8WY38
LinkDB
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Position
V:complement(14738384..14739006)
Genome browser
AA seq
192 aa
AA seq
DB search
MKFLLRASTLAGQSLRFASQRPKVFFDVTIGEEPAGRVTMELFNDVVPKTAENFRALCTG
EKGVGKQGVPLHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGIKFKDENFDLKHSGP
GCLSMANAGPNSNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAPSKT
VTIADCGELKNE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccttctccgcgcctctacactcgccggacaatcgttgcgattcgcctcgcaa
cgaccaaaggttttcttcgatgtgacaattggagaagagccagccggacgtgttaccatg
gagcttttcaacgatgtcgtcccaaagactgctgaaaatttccgcgccttgtgcactgga
gagaagggagttggaaagcaaggcgttccacttcatttcaagggctccaaattccacaga
atcattccagagttcatgattcagggaggagacttcacccgtcacaacggaaccggagga
gaatcaatctacggaatcaagttcaaggacgagaactttgacttgaagcactccggacct
ggatgcttgtcgatggccaacgctggaccaaactccaatggatcccaattcttcatctgc
acagttgacaccccatggctcgatggaggacacgttgtcttcggacaagtcaccgacgga
atgtccgtagtgaagaagattgagaagatgggatctcgctccggagctccatcgaagact
gtcaccatcgctgattgcggagagttgaagaacgagtaa
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integrated database retrieval system