Caenorhabditis briggsae (nematode): CBG_04769 Help Entry CBG_04769         CDS       T01054                                  Name (RefSeq) Protein CBG04769   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr04140   Autophagy - animal cbr04148   Efferocytosis Brite KEGG Orthology (KO) [BR:cbr00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     CBG_04769    04148 Efferocytosis     CBG_04769  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cbr04131]     CBG_04769 Membrane trafficking [BR:cbr04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     CBG_04769 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Beta-prop_EML Clathrin TPR_Vps41 GDH_HM2 Beta-prop_WDR3_1st TEX15 Motif Other DBs NCBI-GeneID:  8579949 NCBI-ProteinID:  XP_045092761 WormBase:  CBG04769 LinkDB All DBs Position V:<15207686..>15214173 Genome browser AA seq 949 aa AA seqDB search MYDAYTPKDVAGSLPVEVTCLAFQESNQTVLAGGRAGHLYAYSVSSNRRGGFELSKFCKS FHKKAVQELKVCEREDLLLCVSDGQLMAHRLSDQDFKVETLIHKAKPVQTFARFSPKTSG DLYVIVASRKKLFLFKWGEKDGHKDFIEVALDYNPVFTDTPSSIKCVGEMVFFSVRNEYF SMTMQKDKTARTSSSDEVAPEAWNGFVTRLLNFNCQPGIVPMIDKRRVAFVRSETVQMTD IWGNRPADGLKDVLTFTEVPMQIGGFFRSSILEKRELWKRNAGGAEGAPVSLYDSPYLVG MLSNGRVEVLSLFSDVPVQTMKLPKSMRLCNGAKGQIFVASLSDIWLMDTATNLRKNVYH LIQERQFEMAIQLADNSNLIPDDQKIEIKKKAALNLFNQKKFDESFALFGEIKTEVVQIL RMFPELLPDGFQKPPGGVTDMPANDRMRALLALGNYLSEVRTEHAKHIELYNRLRSSGQA KKTDTEEMNTLLLTLRVVDTTLLKCYIKTKPALVDSLIRLQSNACTFEDAKKILESEGRL RSLFVLYETRKKHEMALDLLIDQSSQENADPFFDDAIQQIVEYLQSLGNNSLPLILKYAK WVLDKNLEAGVQIFTSDETEMARNLNRKAVVEFMKSECPEAMIPYLEHVIFKWEEPASYF HETLLEYYVAKVNSLFKDYVHAFPDAYSDENITRAGDEDGELGIFRKRLLRFLEISHSYS PQTVLLQLAPHAFFEERALILGRLKQHDQALALYVNTLKNVPAAEEYCKLYYNPADDTNS QVYLLLFRALVHPNQHHHHSIPFNADSTPFGSFRDDVSETSTVVNSTSSYQPDVNTAIKI LAKYADKIDTIGALNMLPAKTPLRVVFSAINAVIQTTGRQASTRKMEKSVSECAMTKKLE RKNRAQSTKIVVTFSSECVVCDKKIAVSAFVRYPDGRLAHLYCHNDVKI NT seq 2850 nt NT seq  +upstreamnt  +downstreamnt atgtacgacgcatacacaccaaaagatgtggctggaagcctgcctgttgaagtcacatgt ctggcttttcaagaatcgaaccaaacagtgctagctggtgggcgagcaggacatttgtat gcttattcggtttcttctaaccgtcgcggtggttttgagctctcgaaattttgcaaatcg tttcacaaaaaagcagttcaagagttaaaagtttgcgaaagggaagatcttttattgtgt gtttccgatggacagctaatggctcatcggctcagcgatcaggattttaaagtggagact ttgattcataaagcgaagcccgtccaaacttttgcgaggttttcaccgaagacatctgga gacctctacgtcatcgtcgcgtctcgaaagaagctgttcctcttcaaatggggtgaaaaa gacggtcataaggattttatagaagtcgcgctggattataaccccgtttttacggataca ccgtcttcgataaaatgcgtcggcgaaatggtgttcttctcggttcgaaatgagtacttc tcgatgacaatgcaaaaggataagaccgcccgaacgtcttcttcagacgaagttgctcca gaagcttggaatggattcgtgacacgtcttctaaatttcaactgtcaacctggcatcgtg ccaatgattgataagcgacgagtggcgtttgtgagaagtgagacggttcaaatgacagat atttgggggaatcgaccggctgatgggttgaaggatgtgctcacttttacagaggtcccc atgcagattggtgggtttttcagaagttcgattttggaaaaaagggagctgtggaagaga aacgccggtggcgccgaaggtgcaccagtcagcttgtacgattctccatatctggtcgga atgctctcgaatggacgtgtcgaagtcctttctctattcagtgatgttcccgttcaaacc atgaaacttccaaaatcaatgagactatgtaacggggcgaaaggccagatcttcgtcgcc tcactctccgatatctggctaatggatactgcaacgaatctccggaaaaatgtgtaccat ttgatacaggagcgacaattcgagatggcaattcaattggcggataattcgaatttgatt ccggatgatcagaaaattgaaattaaaaaaaaggcggcgttgaatctgtttaatcagaag aaattcgacgaatcgtttgctctattcggagagattaaaactgaagtggtgcaaatactt cgaatgtttccagaattgcttccagatggatttcaaaaaccacctggaggtgtgactgat atgccagctaacgacaggatgagggctctgctggcacttggaaattatctatcggaggtt cgaacggagcatgcgaagcatattgaattgtataataggctgagatcatctggacaggcg aagaagacggatacagaggaaatgaatacgctgttgttgacgttgagagttgtggatacg actctgttgaaatgttatattaagaccaaacccgctctcgtcgactccctgatccgcctc cagagcaacgcgtgcacattcgaagatgccaagaaaattctggaatctgaaggacgtctc cgatccctttttgtgctctacgagactcgaaaaaagcacgaaatggcgttggatcttctg atagatcaatcgagtcaagagaacgcggatcctttcttcgacgacgccattcaacaaatc gtcgaatatcttcaaagtctcggaaacaatagtcttccattgattttaaaatatgccaaa tgggttttagacaaaaatctcgaagctggagttcagatttttacgagtgatgagacggaa atggcaaggaatctgaatcggaaagcggttgtggaatttatgaaaagcgagtgtccagaa gcaatgataccgtacttggagcatgtgatttttaaatgggaggagccggcgtcctacttt catgagacacttttagagtactacgtggcaaaagtgaactcgctttttaaagattatgta catgcttttccagacgcctattcagatgagaacatcactcgagccggcgacgaggacgga gagctcggaatcttccgaaaacgtcttctgagatttctggaaatctctcattcctatagt ccacaaactgtacttcttcaacttgctcctcatgccttcttcgaggagagagcactgatt ttgggacggctgaaacagcatgatcaggctttagctctgtatgtgaatacgttgaaaaat gtgccagctgctgaggagtactgtaagctgtactataatccggcggatgacaccaattca caagtgtatctccttctgtttcgagccctggtccatccgaatcaacatcaccaccactcg attccatttaacgccgattcgacgccattcggatcgtttagagatgacgtttcggagacg tcgacagtcgtcaactcaacgtcttcttatcagccggacgtcaacacggcgatcaagatt ttggcgaagtatgcggataaaatcgatacgatcggagcgttgaatatgcttcctgcgaag acaccgttgagagttgttttctcggcgattaatgcagtcattcagacaactggacggcaa gctagtacgagaaaaatggagaaatccgtgtcagaatgtgcgatgacgaagaaattggag cgcaagaatcgagcgcaatcgacgaagatcgtcgtcacgttctcgtcggaatgcgttgtt tgtgataagaaaatcgccgtcagcgcattcgttcgatatccagatggacggctagctcat ctctattgtcataacgatgttaaaatttga

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