Caenorhabditis briggsae (nematode): CBG_05052
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Entry
CBG_05052 CDS
T01054
Symbol
Cbr-lmp-1
Name
(RefSeq) Protein CBR-LMP-1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03272
Virion - Hepatitis viruses
cbr03273
Virion - Lassa virus and SFTS virus
cbr04140
Autophagy - animal
cbr04142
Lysosome
cbr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
CBG_05052 (Cbr-lmp-1)
03272 Virion - Hepatitis viruses
CBG_05052 (Cbr-lmp-1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
CBG_05052 (Cbr-lmp-1)
04142 Lysosome
CBG_05052 (Cbr-lmp-1)
04140 Autophagy - animal
CBG_05052 (Cbr-lmp-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_05052 (Cbr-lmp-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_05052 (Cbr-lmp-1)
04090 CD molecules [BR:
cbr04090
]
CBG_05052 (Cbr-lmp-1)
Membrane trafficking [BR:
cbr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
CBG_05052 (Cbr-lmp-1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
CBG_05052 (Cbr-lmp-1)
Other autophagy associated proteins
RNautophagy/DNautophagy
CBG_05052 (Cbr-lmp-1)
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
CBG_05052 (Cbr-lmp-1)
CD molecules [BR:
cbr04090
]
Proteins
CBG_05052 (Cbr-lmp-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2_2nd
Syndecan
Motif
Other DBs
NCBI-GeneID:
8586871
NCBI-ProteinID:
XP_045092828
WormBase:
CBG05052
LinkDB
All DBs
Position
X:complement(11843156..11844012)
Genome browser
AA seq
252 aa
AA seq
DB search
MSKSLVAVFALLAVASAEHFYVTNNNTGLACIIVDGDFMFNLVFQEGNATQKYNVLLNNT
LNVDGDCNAVVNNQSVQTLSITFNPAGQSARYPKEWELNIVFGTSSNEAFKIIDYTLKTQ
KTELVPYFGTFVRDEKDAGDVTATETNAYKVCYFRMPSLASPTSNFQCSTAKLGLVGGST
IDIKTANIIAFAQVNGTVFPANQLYDVCYLDARTSDVVPIVVGACLAVLVIVVLVGYLIG
RARAKRQGYASV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatcacttgtcgccgtgttcgccttgttggccgtcgcttctgctgagcacttc
tatgtgaccaacaataacactggactcgcttgcatcatcgttgatggagacttcatgttc
aatcttgtcttccaagagggaaacgctacccagaagtacaacgtgctcctcaacaatacc
ctcaacgtcgatggagattgtaacgcagtcgtcaacaatcaatctgtccaaactttgagc
attaccttcaacccagcgggacagtcagctcgttatccaaaggagtgggagctcaatatc
gtcttcggaacatccagcaatgaagcttttaagattatcgactacactctcaagacccaa
aagactgagcttgttccatattttggaactttcgtgagagacgagaaggacgctggagat
gtcaccgccactgagaccaatgcttacaaggtttgttatttcagaatgcctagtctagcc
tctccaacttcaaattttcagtgctccactgccaagctcggactcgttggaggatccacc
attgacatcaagaccgccaacatcattgccttcgctcaagtcaacggaaccgtcttccca
gccaaccagctctacgatgtctgctatcttgatgcccgtaccagcgatgttgttccaatt
gttgtcggagcctgccttgccgttctcgtcattgttgtgctcgtcggatatctcatcggc
cgtgctcgcgccaagagacaaggatacgccagcgtctaa
DBGET
integrated database retrieval system