Caenorhabditis briggsae (nematode): CBG_05109
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Entry
CBG_05109 CDS
T01054
Name
(RefSeq) Protein CBG05109
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00061
Fatty acid biosynthesis
cbr00071
Fatty acid degradation
cbr01100
Metabolic pathways
cbr01212
Fatty acid metabolism
cbr04146
Peroxisome
Module
cbr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CBG_05109
00071 Fatty acid degradation
CBG_05109
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CBG_05109
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cbr01004
]
CBG_05109
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_05109
Enzymes [BR:
cbr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CBG_05109
Lipid biosynthesis proteins [BR:
cbr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CBG_05109
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of breast milk
CBG_05109
Exosomal proteins of breast cancer cells
CBG_05109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
8580762
NCBI-ProteinID:
XP_002638767
WormBase:
CBG05109
UniProt:
A0AAE9IXL4
A8WZ85
LinkDB
All DBs
Position
I:1570852..1574821
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AA seq
725 aa
AA seq
DB search
MVITDTAAWVQSQSRSIVDFISAPTANSSSLPPYVQIGAAAAVTMGLGYYLSKGVSSGSS
SGSSGAYTFSGVTYSGNVKPLVDPMNQSRVLPDGSRVSAYLKDDKLQAFLFEDARTLYQG
VRRGARLSNNGPMLGRRVKQTDGSIPYVWETYNHILERADNVSVAFRELGIPTGNEENIG
IYSKNRPEWIVTEFATYNYSNVIVPIYETLGSEASVFILNQAEIKIVVCDDNAKATGLLK
FKEQCPSLKTLVVMEPITDELQTSATALGVKVLTFEDLEKLGKNAKTRPAHIPPTPEDLA
TICYTSGTTGTPKGVMLTHANVIADGVCMDFFKHSGIASTDSMISFLPLAHMLERVIESV
CFCVGAKVGFYRGDIRVLAEDIKELRPTVVPVVPRVLNRLYDKVMSEVNKSTLKKLLFDF
AISYKARDMANFNIRNDGFFDNIVFKKIREGFGGRVRLMITGSAPLSTNVLTFVRAAMGC
VVVEGYGQTECVAACTVSMEGDSLAGHVGMVIPSCQIKLVDVPELNYYAKDQAGEVCVKG
HIIFKGYYKNEQQTKETIDSEGWLHTGDIGRWTPEGTLKIVDRKKHIFKLSQGEYVAPEK
IENIYVRSKYVAQSFVHGESLKTCLIAVVVPDAEVLVPAMADQGIKGSLEELCKNETVKK
AVLDDMVAVGKKAGLFSFEQVRDIYLSAEQFSVENDLLTPTLKSKRPKLKAHYAKELERM
YSKLS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggttatcacagacacggctgcgtgggtacagtctcaatcgagaagtattgtcgatttc
atttcggcaccaaccgccaactcgtcgtcccttccaccgtacgttcaaatcggagccgcc
gccgccgtcacaatgggtcttggctattatctgtcgaagggcgtctcgtctggatcgtct
tccggatcatcgggtgcctataccttcagcggagtgacctattcgggaaatgtcaagcca
ctggtggatccgatgaatcagagtcgtgtgttgccggacggttcccgcgtcagcgcctac
ttgaaagacgacaaactgcaagcgttcttgttcgaagacgcccgcacactctaccaaggc
gtccgccgtggagcccgcctctcgaacaatggcccgatgctcggacgacgtgtcaaacag
acggacggctcgattccgtacgtttgggagacgtacaatcacattctggagcgtgccgac
aatgtgtctgtcgcgttccgtgagctcggcattccaactggcaacgaggagaacattgga
atctactcgaagaatcgtcccgagtggattgtcaccgaattcgccacgtacaactactcg
aatgtgattgttccgatctacgagacactcggctccgaagcatcggtgttcattttgaat
caggcggaaattaagattgtagtctgtgatgacaatgcaaaggctacaggtctactaaag
ttcaaagagcaatgccccagcctcaaaacactggttgttatggaaccaatcaccgacgaa
ctccaaacatcggccaccgcacttggagtaaaagttctgacatttgaggatctggagaag
cttggaaagaacgcgaagactcgtccagcacacattccgccgactccagaagatttggca
acgatttgctacacatctggaaccaccggtacaccaaaaggagtcatgctcacacacgcc
aacgtcattgcggacggtgtctgtatggatttcttcaagcacagtggaatcgcatcgact
gactctatgatcagcttccttccattggctcatatgctcgagagagttattgagagcgtt
tgcttctgcgtcggtgccaaagttggattctatcgaggagacattcgggtgctggctgag
gatatcaaggaattgcggccgacggttgtgccagtggtcccacgggtgctgaatcggctc
tacgataaagtgatgtccgaggtcaacaagtcgacgctgaagaagttgttgtttgatttc
gctatctcgtacaaggcgagagatatggcaaacttcaacattcgcaacgacggcttcttc
gacaacattgtgttcaaaaagatccgcgaaggattcggaggacgtgtccgtctgatgatc
actggctccgccccgctctccaccaacgtactcaccttcgtacgcgctgcgatgggatgt
gtagtcgttgagggatacggacagacggaatgcgtcgccgcttgcactgtctcgatggaa
ggtgactcgttggctggacacgttggcatggtgatcccatcgtgccagattaaactggtc
gacgtcccagaactcaactactacgccaaggatcaggctggagaggtttgcgtgaaggga
cacatcatcttcaagggatactataagaatgagcaacagacgaaggagacgattgactcg
gaaggatggttgcacacgggagacattggcagatggacgcccgagggaacgctgaagatt
gtggatcgcaagaagcacatcttcaaactgtcccaaggagaatacgtggcaccggagaag
attgaaaatatctatgtgcggtccaagtacgttgctcagtcgtttgttcatggagaatcg
ctgaagacgtgtctcattgctgttgtggtgcctgatgcggaggttctcgttccagcgatg
gccgaccaaggaatcaagggaagtctcgaggagttgtgcaagaatgagacggtcaaaaag
gcggtgctcgacgacatggtggccgtcggcaaaaaggcgggactcttctcgttcgaacaa
gtccgtgacatctacctatcggctgagcaattcagtgtggagaacgacttgttgacgcca
acactgaagagcaaacgcccgaagctgaaggctcactacgcgaaagagctcgagagaatg
tactcgaaactttcataa
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