Caenorhabditis briggsae (nematode): CBG_05179
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Entry
CBG_05179 CDS
T01054
Name
(RefSeq) Protein CBG05179
KO
K15223
upstream activation factor subunit UAF30
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_05179
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
CBG_05179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
CDC45
Motif
Other DBs
NCBI-GeneID:
8583260
NCBI-ProteinID:
XP_002641267
WormBase:
CBG05179
UniProt:
A0AAE9ELA1
A8WZB4
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Position
III:4638194..4639304
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AA seq
324 aa
AA seq
DB search
MAVVDPISPFPMDKEVAEEEIALLVRKPGFNDLTIVDIIRHMNNRFNTSFDSFKSQLKKM
VLAEIAKKNQEDESSDSSDESGDDSDGEDKKETKDVKKEVKDESDDDEVDDPVVPKKRAS
KEETDMASNIKSTRRAAASDALKSIRTSAGGRFVKKSTKVKDPNADMSGKFGPMTKLCYI
STELQQITKDQWMKRCDVVKVLWDYIKANNLKDPKNGQFIICDDVMRSIFNKNRFKGFGM
AKFLTKHIIGTSDMAPDMREEAEAEMKKRRSEWLERQRLKEEVKDDESDEDDATEGPSAK
KPKVEEDDEEKNGKDDESSSSDSD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtggatccgatttctcctttcccgatggacaaggaggttgctgaggaggag
attgctcttttggttcgcaagcctggcttcaatgatttgaccatcgtagatattattaga
cacatgaataaccgcttcaacaccagtttcgactcattcaaatcacaactgaagaaaatg
gttcttgcggaaattgcaaaaaaaaaccaggaagatgaaagttctgacagttctgatgag
agtggagatgatagcgacggcgaagataaaaaggaaacaaaggatgttaagaaagaagta
aaggacgaaagtgatgatgacgaagttgatgaccctgttgttccgaaaaagagagcttca
aaagaggagacagatatggcctcgaacatcaagtcaacaaggcgggctgctgcttctgat
gccttaaagtcgattcgtacctcggctggaggtagatttgttaaaaagtcaaccaaagtc
aaggatccgaatgctgacatgtctggaaagttcggtccaatgacgaaactctgttatatc
agcaccgagctgcaacaaatcactaaagatcaatggatgaaacgatgcgacgtcgtgaaa
gttttatgggattatatcaaagctaacaacctgaaggatcccaaaaacggacagtttatt
atttgtgacgatgtaatgcgctcgattttcaacaagaatcgtttcaaggggtttggaatg
gccaagttcctcacaaaacacatcatcggtacaagtgatatggctccagatatgagggaa
gaagctgaagctgaaatgaagaagagaagaagcgaatggctggaaagacagaggcttaaa
gaagaagtaaaagacgacgaatccgacgaagacgatgctactgaaggcccatcagccaag
aaaccgaaagtagaagaagatgacgaggagaagaatggaaaggatgacgagtcctcctca
tctgacagcgactaa
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