Caenorhabditis briggsae (nematode): CBG_05188
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Entry
CBG_05188 CDS
T01054
Symbol
Cbr-skpt-1
Name
(RefSeq) Protein CBR-SKPT-1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04068
FoxO signaling pathway
cbr04120
Ubiquitin mediated proteolysis
cbr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CBG_05188 (Cbr-skpt-1)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
CBG_05188 (Cbr-skpt-1)
04150 mTOR signaling pathway
CBG_05188 (Cbr-skpt-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_05188 (Cbr-skpt-1)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CBG_05188 (Cbr-skpt-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_4
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
8583268
NCBI-ProteinID:
XP_002641275
WormBase:
CBG05188
UniProt:
A0AAE9DAB0
A8WZC2
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Position
III:4608660..4610106
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AA seq
418 aa
AA seq
DB search
MFRVIGRLPASLDEKADSDAENDADRVFTDESDPIFPCYNQYPKKSIRLSVSKNSARLKS
INLNDVPKKGVTTLPIRRKGFRTLEDPFRKYKVPEEVIDFIFSNLRKRDLLAVMAVCKSF
YAIGTKSKNWLITDVMERPVSELALAGLMKRKIRVLRLAGAKADPMSRVNIRLYAKTMHS
QCRLEFLDLSRANLTERQLLIILKPCVKLQCLSIEGNILNNEVARCISANRDLLELDISM
TRGISAEGARMIVQNCTKLEQFNASWCELDKKALDVIVHNITGNIRKLSLSGSVRGYGLN
GEHIDILSQKVDEVVDLDISDNGELTDASIATLVAYFPHLTQLSINRCYGIDPNMLIHLN
NKASLRYLNVHGNITENNMDVFLRMCDRLRINNQLFNHTAKPVTNNDYTIWGNIMLEK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcgttatcggacgacttcctgcaagtcttgacgagaaagcggattcagatgcg
gaaaacgacgcggatagagtattcactgacgagtccgatcccatttttccatgctataat
cagtatccaaagaagtcgatcaggctctcggtgtccaaaaactcagctagactcaaatcg
ataaacttgaacgatgtcccgaaaaagggagtgaccactctaccaatcagaagaaaagga
ttccgtactctcgaagatccattcagaaagtacaaggttccagaagaagtgattgatttt
atcttctccaatttgcgaaaacgagatcttcttgctgtaatggctgtgtgcaagagtttc
tatgcgatcggaactaaatcgaagaactggcttatcactgatgtcatggagcgtccagtc
tcagagttggcgttagctggattgatgaaacgaaaaatccgtgttctccgtctggccggt
gccaaggcagatccgatgtctcgcgttaacatccgcttgtacgccaaaaccatgcacagt
caatgccgtctcgagttcttggatctttctcgtgctaatctcaccgagcgtcaactccta
atcatcttgaagccatgcgttaaacttcaatgtttgtcgatcgaaggaaacattttgaac
aatgaagtggccagatgcatttctgccaatcgcgatctcctcgaactagacatatccatg
actagaggaatcagtgcggaaggcgcaagaatgatcgttcaaaactgcactaaacttgag
caattcaatgcctcttggtgcgaacttgataagaaagcgctcgatgtcattgttcacaac
atcacgggaaacattcgaaagttgagcctttctggatcggttcgtggatatggattgaat
ggcgagcacattgatattctatcacagaaagtcgatgaagtagtggatctcgatatatca
gacaatggagagttaactgatgcatcaatcgccactcttgttgcttattttccacacttg
actcaactttcgattaatcgctgctatggaatcgatccgaacatgctaatacatctaaac
aacaaggcgtcactccgttatctgaacgttcacggtaacattacggagaacaatatggac
gtattccttagaatgtgtgatcgtctccgaatcaacaaccagctgttcaatcacactgcg
aaacctgtcacaaacaatgattatactatttggggaaacatcatgctagagaaatag
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