KEGG   Caenorhabditis briggsae (nematode): CBG_05374
Entry
CBG_05374         CDS       T01054                                 
Symbol
Cbr-dyci-1
Name
(RefSeq) Protein CBR-DYCI-1
  KO
K10415  dynein cytoplasmic 1 intermediate chain
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04145  Phagosome
cbr04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    CBG_05374 (Cbr-dyci-1)
  09142 Cell motility
   04814 Motor proteins
    CBG_05374 (Cbr-dyci-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_05374 (Cbr-dyci-1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cbr04812]
    CBG_05374 (Cbr-dyci-1)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      CBG_05374 (Cbr-dyci-1)
Cytoskeleton proteins [BR:cbr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     CBG_05374 (Cbr-dyci-1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_EML WD40_WDHD1_1st WDR55 Beta-prop_HPS5 EIF3I Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_WDR19_1st KNTC1_N PQQ_3 PEP5_VPS11_N Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 8575509
NCBI-ProteinID: XP_045092917
WormBase: CBG05374
LinkDB
Position
IV:complement(7196366..7198827)
AA seq 663 aa
MQNAEQRRLELQRKKQKLAELKSIRQKDEESRVQNLLRTNENGAAQNGASHRQTLSSEQV
SIVNKIHVTEQSLQMEEILREVGISAEPTIREESPAPPRGAHAENHLNPMSASASNPRIS
SLLSVDLEFSTVQTASTDNKDSAIYSKGTQTDDERISVGEFSLGSQEFDYDDDMIMPVDH
GQFRGRAHSHDQDSPLPYNEEIAKLLGQAKHVDKALQRQDTEEKKSTHVQTVQPLSEEER
NRLTLDPEFLDSFNRSCKVIGRALNEDIDIFINYTKDPYEKAVASDDLLHLAQVYYDETW
TAKRLVTGMAFSEHHPDLLAVSYGPCDVPNEPPGVIVVWNTKSKRITAEFIVYCQSEIQS
VAFARFHAHLLLAGCESGQICVWDNRLTSRKLPINRSPLTTQAHTQPVSCLAVVGTKNAH
NFVSLSRDGRICSWNVDNLTQPVDGKELMTKEGKPASATRMSFPIGEMQTFVVGTDTGEI
LAASRNGADPAVIKTDVCYKGHSGTLTGIEFHRASGVVDFSHLFISSSHDWTIKLWSTKD
ANLKFSFESHPDLVLDVAWSPVHPAVFASIDADGNIFVWNLNEDVEGPVARLRAGAEGDT
VYMNKLIWSADGKHVFVGDDEGRVHMYDVRESLYVLKSEEWNRFARVLSDMKESNEEAEK
YNM
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgcagaatgcggagcagagaaggctcgaacttcaacgcaagaagcagaaacttgcggag
ctgaaatcgatacggcagaaagacgaagagtctcgcgttcaaaatttgctccgtaccaac
gagaacggagctgcacagaatggagcttcgcatcgccaaacgctttcctccgaacaagta
agcattgttaataaaattcatgtaacggaacagtctttgcagatggaggaaattcttcgc
gaagtgggcatctccgccgaaccaacgattcgagaagaatccccagcgccgccccgtgga
gctcacgctgagaatcatctgaatccaatgtctgcttctgcaagtaatccacgaatctca
tctcttctctctgtggacttggagttttcgacagttcaaactgcatcaactgataacaaa
gattcggccatctactcaaaaggaacccaaacagatgatgaacgtatctctgttggcgag
ttctcacttggtagtcaagaattcgattacgatgatgatatgattatgccggtcgatcat
ggtcagttcagaggtcgagctcattcccacgatcaagactcgcctctcccatacaatgaa
gagattgccaaacttctgggtcaggcaaaacacgtggataaggctctacaacgacaggat
acagaagaaaagaagtcgacgcatgtgcaaaccgttcagccacttagcgaagaagagaga
aataggctgacactagatccagaattcttggactcattcaaccgttcgtgcaaagttatc
ggccgtgcgcttaacgaagacattgacatttttatcaactatactaaagatccatacgag
aaagcagtggcttctgatgatcttcttcatttggctcaagtctattacgatgagacgtgg
acggcgaaacgattggtaaccggaatggcattctcggaacatcatccagatttacttgcg
gtttcttatggaccatgtgacgttccaaatgagccaccgggtgtcatcgttgtttggaat
acgaaatcaaaacgaattaccgccgaattcatcgtctactgtcagtcagaaattcaatct
gtagcttttgctcgatttcacgctcatttgcttctcgcaggatgtgaatctggtcagatt
tgtgtttgggataataggttgacgagtcgtaagttgcccataaacagaagtccactcaca
acacaagcacacacacaaccagtttcgtgtctcgcagttgtgggtaccaaaaacgctcat
aatttcgtttcattgagtcgagacggacggatttgcagttggaatgttgacaatttaaca
cagccagtggatggaaaggagttgatgacaaaagaaggaaaaccagcttctgccacaaga
atgtcgttcccaattggtgagatgcaaacgtttgtagttggaacagatactggagagatt
ctggcagcatcgaggaacggagcagatccggctgtcatcaaaactgacgtttgttacaaa
ggacacagcggtactctaacgggtattgaattccatcgtgcttccggtgtcgttgacttc
tcccatctcttcatctcgtcgtcacacgactggaccatcaaattatggagcaccaaggat
gcaaatctgaagttctcctttgaatcccacccagatcttgtacttgatgtcgcctggtct
ccagtccatcctgctgtttttgcatccattgacgccgatggaaacatcttcgtatggaat
ctgaacgaagatgtggaaggtccagtggcacgacttcgagcaggtgcagaaggagacacg
gtgtacatgaacaagctgatctggtcggctgatggtaaacacgtgtttgttggagacgat
gagggtcgtgtgcatatgtacgatgttcgagaaagtttgtacgttctgaaaagtgaagaa
tggaatagatttgctagagtgctatccgacatgaaagaatccaacgaggaggcagagaaa
tataacatgtaa

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