Caenorhabditis briggsae (nematode): CBG_05374
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Entry
CBG_05374 CDS
T01054
Symbol
Cbr-dyci-1
Name
(RefSeq) Protein CBR-DYCI-1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04145
Phagosome
cbr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
CBG_05374 (Cbr-dyci-1)
09142 Cell motility
04814 Motor proteins
CBG_05374 (Cbr-dyci-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_05374 (Cbr-dyci-1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbr04812
]
CBG_05374 (Cbr-dyci-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
CBG_05374 (Cbr-dyci-1)
Cytoskeleton proteins [BR:
cbr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
CBG_05374 (Cbr-dyci-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_WDHD1_1st
WDR55
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_1st
KNTC1_N
PQQ_3
PEP5_VPS11_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
8575509
NCBI-ProteinID:
XP_045092917
WormBase:
CBG05374
LinkDB
All DBs
Position
IV:complement(7196366..7198827)
Genome browser
AA seq
663 aa
AA seq
DB search
MQNAEQRRLELQRKKQKLAELKSIRQKDEESRVQNLLRTNENGAAQNGASHRQTLSSEQV
SIVNKIHVTEQSLQMEEILREVGISAEPTIREESPAPPRGAHAENHLNPMSASASNPRIS
SLLSVDLEFSTVQTASTDNKDSAIYSKGTQTDDERISVGEFSLGSQEFDYDDDMIMPVDH
GQFRGRAHSHDQDSPLPYNEEIAKLLGQAKHVDKALQRQDTEEKKSTHVQTVQPLSEEER
NRLTLDPEFLDSFNRSCKVIGRALNEDIDIFINYTKDPYEKAVASDDLLHLAQVYYDETW
TAKRLVTGMAFSEHHPDLLAVSYGPCDVPNEPPGVIVVWNTKSKRITAEFIVYCQSEIQS
VAFARFHAHLLLAGCESGQICVWDNRLTSRKLPINRSPLTTQAHTQPVSCLAVVGTKNAH
NFVSLSRDGRICSWNVDNLTQPVDGKELMTKEGKPASATRMSFPIGEMQTFVVGTDTGEI
LAASRNGADPAVIKTDVCYKGHSGTLTGIEFHRASGVVDFSHLFISSSHDWTIKLWSTKD
ANLKFSFESHPDLVLDVAWSPVHPAVFASIDADGNIFVWNLNEDVEGPVARLRAGAEGDT
VYMNKLIWSADGKHVFVGDDEGRVHMYDVRESLYVLKSEEWNRFARVLSDMKESNEEAEK
YNM
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgcggagcagagaaggctcgaacttcaacgcaagaagcagaaacttgcggag
ctgaaatcgatacggcagaaagacgaagagtctcgcgttcaaaatttgctccgtaccaac
gagaacggagctgcacagaatggagcttcgcatcgccaaacgctttcctccgaacaagta
agcattgttaataaaattcatgtaacggaacagtctttgcagatggaggaaattcttcgc
gaagtgggcatctccgccgaaccaacgattcgagaagaatccccagcgccgccccgtgga
gctcacgctgagaatcatctgaatccaatgtctgcttctgcaagtaatccacgaatctca
tctcttctctctgtggacttggagttttcgacagttcaaactgcatcaactgataacaaa
gattcggccatctactcaaaaggaacccaaacagatgatgaacgtatctctgttggcgag
ttctcacttggtagtcaagaattcgattacgatgatgatatgattatgccggtcgatcat
ggtcagttcagaggtcgagctcattcccacgatcaagactcgcctctcccatacaatgaa
gagattgccaaacttctgggtcaggcaaaacacgtggataaggctctacaacgacaggat
acagaagaaaagaagtcgacgcatgtgcaaaccgttcagccacttagcgaagaagagaga
aataggctgacactagatccagaattcttggactcattcaaccgttcgtgcaaagttatc
ggccgtgcgcttaacgaagacattgacatttttatcaactatactaaagatccatacgag
aaagcagtggcttctgatgatcttcttcatttggctcaagtctattacgatgagacgtgg
acggcgaaacgattggtaaccggaatggcattctcggaacatcatccagatttacttgcg
gtttcttatggaccatgtgacgttccaaatgagccaccgggtgtcatcgttgtttggaat
acgaaatcaaaacgaattaccgccgaattcatcgtctactgtcagtcagaaattcaatct
gtagcttttgctcgatttcacgctcatttgcttctcgcaggatgtgaatctggtcagatt
tgtgtttgggataataggttgacgagtcgtaagttgcccataaacagaagtccactcaca
acacaagcacacacacaaccagtttcgtgtctcgcagttgtgggtaccaaaaacgctcat
aatttcgtttcattgagtcgagacggacggatttgcagttggaatgttgacaatttaaca
cagccagtggatggaaaggagttgatgacaaaagaaggaaaaccagcttctgccacaaga
atgtcgttcccaattggtgagatgcaaacgtttgtagttggaacagatactggagagatt
ctggcagcatcgaggaacggagcagatccggctgtcatcaaaactgacgtttgttacaaa
ggacacagcggtactctaacgggtattgaattccatcgtgcttccggtgtcgttgacttc
tcccatctcttcatctcgtcgtcacacgactggaccatcaaattatggagcaccaaggat
gcaaatctgaagttctcctttgaatcccacccagatcttgtacttgatgtcgcctggtct
ccagtccatcctgctgtttttgcatccattgacgccgatggaaacatcttcgtatggaat
ctgaacgaagatgtggaaggtccagtggcacgacttcgagcaggtgcagaaggagacacg
gtgtacatgaacaagctgatctggtcggctgatggtaaacacgtgtttgttggagacgat
gagggtcgtgtgcatatgtacgatgttcgagaaagtttgtacgttctgaaaagtgaagaa
tggaatagatttgctagagtgctatccgacatgaaagaatccaacgaggaggcagagaaa
tataacatgtaa
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