Caenorhabditis briggsae (nematode): CBG_05463 Help Entry CBG_05463         CDS       T01054                                  Symbol Cbr-smg-3 Name (RefSeq) Protein CBR-SMG-3   KO K14327   regulator of nonsense transcripts 2 Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03013   Nucleocytoplasmic transport cbr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     CBG_05463 (Cbr-smg-3)    03015 mRNA surveillance pathway     CBG_05463 (Cbr-smg-3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cbr03019]     CBG_05463 (Cbr-smg-3) Messenger RNA biogenesis [BR:cbr03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      CBG_05463 (Cbr-smg-3)    mRNA cycle factors     P-body specific factors      CBG_05463 (Cbr-smg-3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MIF4G Upf2 Motif Other DBs NCBI-GeneID:  8575583 NCBI-ProteinID:  XP_002633586 WormBase:  CBG05463 UniProt:  A0AAE9D6G1 LinkDB All DBs Position IV:complement(6859871..6865828) Genome browser AA seq 1141 aa AA seqDB search MPYTVEKSWLEELQKRVEFQETSRLKMVEVRENFLDNEKELRSLDSALKKTTSFMKKIKL LSAATVPQLIEELSKLNLSKFVEEIASGIIETKLKISDIPKVTELCLAVSAMYSNFSEQM AGEFKKILPVKKTDKITNVAKLRVDIIFLAELCLCGVFNEKEGLQVLGAVLTYLIQTDKI DFVNYGLLATVSRCVGWQIANIIPIPLGDDNETVKIEETDLPTSSALSGDQKKSIRELFK VYYDVLYAKTEKICSARNKAMKKVKRQERSRGDAADEEKAKFNELQAELDTLRKMTNELS CAIGITMKPLKEEASDDEEDEAANLEMGRQLAEGAIKLWSDEETKAFYADLIDLRLMVPK DLYKESEQRTLSKAKMAERIEDIDVENINESGAVDAKRTMSRANSEKESTPEESEAAVPT KEDISEDRGVNKWQKFVLDLDHLVSKYSTDKAAEYFVSNLNNKGCRKRLVKLMVEPPPTR IDVVPFYARLIATLENVMPDLTTEIVTQLLDKFRGFLQQKPSSSSAIAIKVEAKMVCVMM IAELMKFGVISRPEGLSCLRQLVYDLRGHSVEMTATFMESGGLYLYRHTESHAKMKRLLE VVKAKRERMKDQRQAMLIDNAYFTCLPPEDSKEERLRLKFDEEDTPMKKFIRHVVLDIND TNVDNHLKCLRRLDWSDPEISDYTIRYLSSTWLLPIENLQHLASAIAGLCNLQHLQWIGM AVIDSTIQTIRISLENPGNFNQWAHSAAVYLAELYSFELCDEDLIIQILYQLISYPEPEN SWKDLHRIRMICAVLEIVREFIQKGPGRLKLRYFMAYFHRYYFTKKEAWDLETQDKQPNS DGGDNNETVPDMETSFPYEVEIAYSEMCRKFRGKKKNIPNRWPKNLKEAQDAVAKVEKKF KGDLKEVAGEHSDIDDGGMKDLNVIEEDDEDEDDDNKYSEGEQEFEDSDEERQRGLSMSN AVTKEEDDDFQRELDRMMGEGFRQSAAPAAAVQYDVTLPAAAKNRFSRNIKFAEDTKARS SPSRSSEMDFDDEPSSSTGVAASGRQKQGRVTLMVRGKANKPALKTVNIDDGELQRRWKE EKAREEEERADMKRLTLGQHRRIEMEEEKALLAQLHGSRKNNAKKNPPRLQFPKPHLEGE W NT seq 3426 nt NT seq  +upstreamnt  +downstreamnt atgccttatacagtagaaaagtcatggttggaagaactgcaaaaaagggtggaattccaa gaaacgtctcgtttgaaaatggtcgaagttagagaaaattttctagacaatgagaaagaa ttgagaagtttggattctgctctcaagaaaacgactagcttcatgaagaagatcaaattg ttaagtgctgcaaccgtaccacagcttatcgaagagctttcgaaattgaatttgagcaaa ttcgtggaagaaatcgcttcgggtatcatcgaaacgaagctaaaaatatcggacatccca aaagtgaccgaattgtgtcttgccgtttcagccatgtattcgaattttagcgaacaaatg gccggcgaattcaagaagattcttcccgtcaagaaaactgacaaaattacgaatgttgca aaattgagagtggatataattttcctcgctgaactttgtctgtgtggagttttcaatgaa aaggaaggacttcaagttctcggcgccgtgctcacttatctcattcaaactgataaaatt gatttcgtcaattatggattattggcgacagtttcacgatgtgtgggttggcagattgca aatatcattccgattcctttgggagatgacaatgaaacagttaaaattgaggaaactgat cttccaacatcatcagcgctttctggagatcaaaagaaatcgatacgagaactttttaag gtttactacgatgttctatacgcaaaaaccgaaaagatatgctccgcgcgaaacaaggca atgaaaaaagtgaagcgtcaggagagaagtcgaggagatgcggctgatgaggaaaaggcg aagttcaatgaactccaagccgagttagatacgttaagaaagatgactaatgaactgtcg tgtgcgattggtattaccatgaagccgttgaaagaggaagcaagtgacgatgaggaggac gaagctgccaacctggaaatggggcgacaattggctgaaggagctatcaagttgtggagt gatgaggagacaaaagcgttctacgcagatctcatagatctgcgtctgatggttcccaag gatctttacaaagaatcagagcagcggacgcttagcaaagcaaaaatggctgaacgaatc gaagatatcgatgtagagaatatcaacgagtcgggagctgttgatgcgaaacgaacgatg tcacgagctaattctgaaaaggagagcactccggaagaatcggaagcagctgttccgaca aaggaagacatttctgaagaccgaggtgtgaacaagtggcagaagttcgtgctggatttg gaccatcttgttagcaaatactcaactgacaaggccgccgagtattttgtatccaatttg aacaataaaggatgccgtaagcgactcgtcaaactgatggtcgagccaccacccactcgg atagacgtcgttccattttatgctcgtctcattgccacgctggaaaatgtgatgccggat ttgacgacagaaatcgtgacacaactgctcgataaattccgaggattccttcagcaaaaa ccatcgtcatcttcagcgatcgcaatcaaagttgaagctaaaatggtttgtgtaatgatg attgccgaattaatgaagttcggagtaatttcccgaccagaaggactcagttgtttgaga caacttgtctatgatcttcgtggtcattccgtcgaaatgactgctacgtttatggaatcg ggaggtctctatctgtatcgtcacaccgaatcgcatgcgaaaatgaagaggctgttggaa gtggtcaaggcgaaaagagagagaatgaaggatcaaagacaggcgatgcttatcgacaac gcctacttcacatgtctgccaccagaggattcgaaagaagaacgcctccgtttgaagttt gacgaagaggatacaccaatgaagaaattcatccgacacgtggttcttgatatcaatgac actaatgtggacaaccacctgaaatgccttcgtagattggactggagtgatcctgaaata tccgattacacaatcagatacctctcatccacgtggctccttccaattgagaatcttcaa cacttagcatcggcgattgctggcctttgcaatcttcaacatctccaatggatcggaatg gctgtcattgattcgacaattcaaactatcagaatctctctagaaaatcctggaaatttc aaccaatgggctcactcggcggcagtttatcttgccgagttgtacagtttcgagttgtgt gatgaggatttgataatacagattttgtaccaactgatttcctatccagaaccagaaaac tcgtggaaagatcttcaccgaatcagaatgatttgcgctgtgctcgaaatcgttcgagaa ttcattcaaaaaggaccaggacgtctgaaattgcgctatttcatggcctacttccaccgc tattatttcacgaaaaaagaagcttgggacctggaaactcaggataagcaaccgaattct gatggtggagataataatgaaactgtgccagacatggagacaagtttcccatatgaagtg gagatagcctactctgaaatgtgtcggaaattccgtggaaaaaagaaaaatattccgaat cgttggccaaagaatctgaaagaagctcaagatgcagttgccaaggttgagaagaaattc aaaggagatctgaaagaggttgctggagagcacagtgatattgacgatggaggaatgaag gatttgaatgtgattgaagaggatgatgaagatgaagatgatgataataaatattctgaa ggggagcaagaattcgaggattctgatgaggaacgacaacgcggactgtcgatgagcaat gcggttacaaaagaggaggatgacgattttcagcgagaactcgacagaatgatgggagaa ggttttagacagtcggcggcacctgctgctgccgtccaatatgatgtgactcttccggct gcggccaagaaccgattctcgagaaacatcaagttcgccgaggatacgaaagccaggtca tcgccatctcgatcttctgaaatggactttgacgatgagccatcgtcttccaccggcgtc gcagcttctggacgtcagaaacagggtcgcgtcactcttatggtacgtggaaaggcgaat aaaccggcgctgaagactgtcaacattgacgatggcgaattgcaacgtcgttggaaggag gagaaggctcgtgaagaggaggaacgagccgatatgaaacgattgacgctgggacagcat cggagaattgagatggaggaagaaaaagcgcttttagcacaattgcacggttctaggaag aacaatgcgaagaaaaacccgccacgcctacaattcccaaaacctcacctcgaaggagaa tggtga

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