Caenorhabditis briggsae (nematode): CBG_05540 Help Entry CBG_05540         CDS       T01054                                  Symbol Cbr-hif-1 Name (RefSeq) Protein CBR-HIF-1   KO K08268   hypoxia-inducible factor 1 alpha Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr04137   Mitophagy - animal cbr04140   Autophagy - animal cbr04148   Efferocytosis cbr04212   Longevity regulating pathway - worm cbr04361   Axon regeneration Brite KEGG Orthology (KO) [BR:cbr00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     CBG_05540 (Cbr-hif-1)    04137 Mitophagy - animal     CBG_05540 (Cbr-hif-1)    04148 Efferocytosis     CBG_05540 (Cbr-hif-1)  09150 Organismal Systems   09158 Development and regeneration    04361 Axon regeneration     CBG_05540 (Cbr-hif-1)   09149 Aging    04212 Longevity regulating pathway - worm     CBG_05540 (Cbr-hif-1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cbr03000]     CBG_05540 (Cbr-hif-1) Transcription factors [BR:cbr03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     CBG_05540 (Cbr-hif-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PAS_11 PAS_3 PAS bHLH_HIF1A PAS_9 PAS_4 Diguanyl_cycl_sensor HLH Motif Other DBs NCBI-GeneID:  8580512 NCBI-ProteinID:  XP_045092977 WormBase:  CBG05540 LinkDB All DBs Position V:complement(18735489..18741153) Genome browser AA seq 843 aa AA seqDB search MEDNRKRNMERRRETSRYAARDRRFKEGEIFDELKQVVPIVEEGTVTHLDRIALLRVAAT ICRLRKTAGNVLENDLDNEFNNEVWNEETIAECLDGFVLIVDSDSSILYVTESVALYLGL TQTDLTGRALRDFLHPADYDEFDKQTKLLHKPKDEESDPNGVNIVLRMKTVISPRGRCLN LKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTRH TCDMRITFVSDKFNYILKSELKSLMGTSFYDLVHPGDMEIVSKAMKELFAKGHNRTPYYR LIAANDTLAWVQTEATTITHTTKGQKGQYVICVHYVLGIQGSEESLVVCTDTMPAGMQVD IKKEIDDTRDYIGRQPEIIECVEFTPLVEGDDMDGYEPAVIPQQQIPEEPVKQADMGIYS VTDEYEQRIYGQVSKYMDDDVDMDSDTESIEDAGLAPEFDVDLAPFYNIDKEEEDSGGEV QTVLTQILNFIIQYIPGARKNSYDDVLQWLFRDQPSSPPPARYRSADRFQSTAKTTHFDT SLASPQFMDSSSRASRPRASYGRRAQSHGGRSTATTITDSSGSSAASTQPQSANYSPLAE GLSQCGINSPPSIKSGQVMYGDSRPMVSRCSPSDPSRRFSAVPPSDSLDVSSAEMSGLHD VSDVFAAMPFADSLLAQEQASAAADNVTLNNSSPTLNACEPIICGKSFQVLFFFHELNVP DDLQWEEPDLSCLAPFVDTCEMMNIDEGLLPPELQALYDLPDFTPAVPSMPAAIPVHIDR SPPCKRMHMSGPSDMDYNMYNNQYQPFQQDSYWQPQTRVPEHQQQQMHRQQQSDPYSPFS MLS NT seq 2532 nt NT seq  +upstreamnt  +downstreamnt atggaggacaacagaaaacgaaacatggaacgccgacgagaaacatctcgatacgcggca cgagatcgtcgttttaaggaaggagagattttcgatgaactcaaacaagtggtaccgatt gttgaagagggtacagtaacccatctcgaccgaatagcacttctacgcgtcgccgccacg atttgccgtcttcgaaagacagccggtaatgttctcgaaaacgacctggacaacgagttc aacaatgaagtgtggaatgaggagacgatagcagagtgtttagatggattcgtcctgatt gtggatagcgattcgtcgattttgtatgtcacagagagtgtcgcgttgtatttgggatta acacagactgacctcactggccgtgctcttcgcgactttttacatccagccgactacgat gagttcgataaacagaccaaacttctgcacaagccgaaagacgaggaatccgatccaaac ggagtcaacattgtgctccgaatgaagacagtgatcagcccacgtggtcggtgtctgaac ctgaagagcgccttgtacaaatccgtctcgttcttggtgcactcaaaagtttcaaccggg ggacacgtgtcatttatgcaaggcatcactatacctgctggacagggcaccacaaatgcc aatgcatctgcgatgacaaagtacaccgaatccccgatgggcgccttcaccacccgtcac acctgcgacatgcgaatcacatttgtctccgacaaattcaactacattctgaaaagcgag ctgaaatctctcatgggaacctcgttctacgacctagtgcatccgggagacatggaaatc gtgtcaaaagccatgaaggagcttttcgccaagggacacaaccgtactccatactatcgg ctgatagctgcaaacgacactttggcctgggtccagacggaagccacaaccatcacacat accactaaaggacagaagggacagtatgtcatttgtgttcactatgtacttggaattcaa ggatccgaagagtcgctggtggtgtgcactgatacaatgccagctggaatgcaagtggat attaagaaggagatcgatgacactagagactacattggaagacagcctgagatcattgaa tgcgttgagttcactccactggttgaaggtgatgatatggatggatatgagccagcggtc attccacaacaacaaattccagaggaaccagtgaaacaagctgatatgggtatctactct gttacggatgagtatgagcaacgtatttatggacaagtctcgaagtatatggacgatgac gtcgacatggactcggataccgaatccattgaggacgctggccttgcgccagagttcgac gtggatttagcaccgttttacaatattgataaggaggaagaggacagcggaggcgaggtt cagactgttctgacccagatacttaacttcataattcaatatattccaggagcacgtaag aacagctacgatgacgttctgcaatggctttttcgagaccagccaagctctccgccgccg gcacgctaccgatcggcggaccgcttccaatcaaccgccaagacgacacatttcgacacc tctctggcctcgccgcaattcatggattcatcatctcgtgcctcccgcccgcgtgccagt tacggacgacgagctcaaagccacggcgggcgaagcacggccacaaccatcacagacagc tctggatcgtcagcagcttctacgcagccgcagagcgccaactactcgccactcgcagaa ggcctctcacagtgtggaattaacagtcccccgagtatcaaatctgggcaagtcatgtac ggagactctcgacctatggtcagccgctgcagtccgtccgatccgtcacgacgcttttcc gccgttccaccatcagattctctcgatgtgtcgtccgctgaaatgtctggactccacgac gtctccgatgtgttcgccgctatgccttttgccgattctctccttgcccaagagcaggcg tcagcagcagccgacaacgtcactctcaacaactcgtcgccgactctaaacgcttgcgaa ccaatcatttgtggcaagtcctttcaagttttgttcttttttcatgaattgaatgttcca gacgatcttcaatgggaagagccggatctgtcgtgtttggcgccgttcgtggacacttgc gagatgatgaacattgatgagggactgcttccaccagagcttcaggcactgtacgacctg ccagatttcacaccggcggttccttcaatgccagcagctataccagttcatattgacaga agtccaccatgtaaacgaatgcacatgagtggtccctccgatatggactacaatatgtac aataatcagtatcaaccattccaacaagactcctattggcagccacaaacacgcgttccc gagcatcagcaacaacagatgcaccgacaacaacagtccgacccatattctccattctca atgctctcctaa

DBGET integrated database retrieval system