Caenorhabditis briggsae (nematode): CBG_05858
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Entry
CBG_05858 CDS
T01054
Symbol
Cbr-egl-19
Name
(RefSeq) Protein CBR-EGL-19
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
CBG_05858 (Cbr-egl-19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_05858 (Cbr-egl-19)
Ion channels [BR:
cbr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
CBG_05858 (Cbr-egl-19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
8575150
NCBI-ProteinID:
XP_002633153
WormBase:
CBG05858
UniProt:
A8X1H0
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All DBs
Position
IV:complement(<7756833..>7769885)
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AA seq
1780 aa
AA seq
DB search
LASMMSSGEDEEQAAADEQERSDLWQQTLQAAVAASSSQDATKKRPAQRKPLRQTNVVER
SERSLLCLSLNNPIRKLCISIVEWKPFEFLILFMICANCIALAIYQPYPAQDSDYKNTLL
ETIEYVFIVVFTIECVLKIVAMGFLFHPSAYLRNAWNILDFIIVVIGLVSTILSKMSIQG
FDVKALRAFRVLRPLRLVSGVPSLQVVLNAILRAMIPLLHIALLVLFVILIYAIIGLELF
CGKLHSTCIDPATGQLAQKDPTPCGNDGSAFKCRPSDSLTNMGVRWECSSNTTWPGPNNG
ITNFDNFGLAMLTVFQCVSLEGWTDVMYWVNDAVGREWPWIYFVTLVILGSFFVLNLVLG
VLSGEFSKEREKARARGLFQKFREKQQLEEDLKGYLDWITQAEDIEPVNEDEQEDEPAAA
AVTGEEVDEEGEERVEDVRPSKWSARVKRLEKFNRRCRRACRRLVKSQTFYWLVILLVLL
NTLVLTSEHYGQSEWLDHFQTMANLFFVILFSMEMLLKMYSLGFTTYTTSQFNRFDCFVV
ISSILEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLL
LLFLFIVIFALLGMQVFGGKFNFNPQQPKPRANFDTFVQALLTVFQILTGEDWNTVMYHG
IESFGGVGTLGVIVCIYYIVLFICGNYILLNVFLAIAVDNLADADSLTNAEKEEEQQEIE
GEDEEFDEGEEEGDEHGAEEPEGEEDMTSARPRRMSEVPAASTVKPIPKASSLFILSHTN
SFRVFCNMVVNHSYFTNAVLFCILVSSAMLAAEDPLQANSTRNMVLNYFDYFFTSVFTVE
ITLKVIVFGLVFHKGSFCRNAFNLLDILVVAVSLTSFVLRTDAMSVVKILRVLRVLRPLR
AINRAKGLKHVVQCVIVAVKTIGNIMLVTFMLQFMFAIIGVQLFKGTFFLCNDLSKMTEA
ECRGEYIHYEDGDPTKPVSKKRVWSNNDFNFDNVGDAMVSLFVVSTFEGWPQLLYVAIDS
NEEDKGPVHNSRQAVALFFIAFIIVIAFFMMNIFVGFVIVTFQNEGEREYENCELDKNQR
KCIEFALKAKPHRRYIPRNRLQYRVWWFVTSRAFEYVIFLIIVMNTVSLACKHYPSSRGF
EDFLDVFNLIFTGVFAFEAVLKIVALNPKNYISDRWNVFDLLVVVGSFIDITYGKLNPGG
TNLISINFFRLFRVMRLVKLLSRGEGIRTLLWTFMKSFQALPYVALLIVLLFFIYAVIGM
QFFGKVALDDSTSIHRNNNFHSFPAAILVLFRSATGEAWQDIMLSCSDREDVRCDPMSDD
YSKGGFNESRCGNNFAYPYFISFFMLCSFLVINLFVAVIMDNFDYLTRDWSILGPHHLEE
FVRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRLACKRLVSMNMPLNSDGTV
CFNATLFALVRTNLKIYTEGNIDEANEQLRSAIKRIWKRTHKDLLDEVVPPAGKEDDVTV
GKFYATFLIQDYFRRFKKRKEMEAKGVLPAQTPQAMALQAGLRTLHEIGPELKRAISGNL
ETDFNFDEPEPQHRRPHSLFNNLVHRLSGAGAKSPTEHERLERGATLLPYEARSFSPTHS
LAGAEGSPVPSQMHRGAPINQSINLPPVNGSARRLPALPPYANHIHDETDDGPRYRDTGD
RAGYDPSQNRMVVANRKYADARVVGAARREIEEAYQLGEQEIDMAADSLAPLMQHVGMHD
IRDINENSRSALLRPAGESSRRQHDSHGGSQEDLLLVTTL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
ttagcgagtatgatgtcatcgggggaggatgaggagcaggctgcagctgatgaacaggag
agatccgatttatggcaacagacgttacaggcggccgtggcagcgtcatcatcacaagat
gcgacgaaaaagaggccggctcaacggaaacctcttcgacagacgaacgtcgtcgagagg
tccgaacggtcgcttctctgcctctccttaaataatcccatccgaaaattgtgcatcagt
attgttgaatggaaaccattcgagtttttaatattgtttatgatatgtgccaactgtatc
gctctagccatctatcaaccctatccagctcaagattcagattataaaaatacattactt
gaaaccattgaatacgtgttcattgttgtattcacgatagaatgtgtactcaaaatagtg
gcgatggggtttctattccatcccagcgcatatcttcgaaacgcatggaatattctcgat
tttattattgttgtaataggtcttgtgagtacgatattatccaaaatgtcaattcaagga
ttcgatgtgaaagcgttgagagcatttcgtgtccttcgacctcttcgtcttgtatccgga
gttccgagtttacaagtcgtgctcaacgccatcctccgagcaatgattccacttcttcac
attgctttgttggttcttttcgtcatcttgatctatgccatcatcggattggaattgttc
tgcggaaaattacattccacttgtatagatccagcaacaggacaactggcacaaaaagat
ccaacaccctgtggtaacgatggaagtgcgttcaagtgtcgaccatctgattctctgacg
aatatgggtgtccgatgggaatgctccagcaacaccacgtggcctggtcccaacaatgga
atcacaaactttgataactttggactggctatgttaacagtattccaatgtgtatcactg
gaaggatggacagatgtcatgtactgggtgaacgatgctgttggaagagaatggccttgg
atatattttgtcactctcgttatccttggatcctttttcgtcctcaatctcgttttggga
gtgttgtccggagaattctcgaaagaaagagaaaaggcgagagcaagaggattattccag
aagtttcgagaaaagcagcaattggaagaagacttgaaagggtacttggactggattacg
caggcagaagacatcgaaccagtgaacgaagatgagcaggaagacgaaccagctgcagca
gcagtgactggtgaagaagtggatgaagagggagaagaacgagtggaagatgttcgaccg
agtaaatggtcagctagggtaaaacgattggagaagtttaataggagatgtcgaagagca
tgcagacgattggtgaagagtcaaacattttattggcttgttatccttctcgtgttgttg
aatacgttagtattgacatctgaacactatggacaatccgaatggctcgaccacttccaa
acaatggccaacttgttcttcgtaattctgttctcaatggaaatgcttctgaagatgtat
tctcttggattcaccacatacacaacatcacagttcaacagattcgattgttttgtcgtt
atcagttcgattctcgagttcgttctcgtctatttcgatttgatgaaaccactcggagtg
tctgtgttgcgttctgcacgtcttctgagaatattcaaagtcaccaaatactggacgtcg
ctgagaaatttggtctcttccctgttgaactctctccgatccatcatctctcttctgtta
cttctcttcttgttcatcgtgattttcgcgttgctgggaatgcaagtattcggaggaaaa
ttcaacttcaatccacaacaaccaaagccaagagccaactttgatacattcgtccaagcc
ctgctgacagtgttccagattctgactggtgaagattggaatactgtaatgtaccatgga
attgagtctttcggaggagtcggaactctcggagtcatcgtatgcatttattatattgta
cttttcatctgcggtaactatatccttctgaatgtcttcttggctattgctgtagacaat
ctggcagatgcagacagtttaacaaatgctgaaaaagaagaagaacaacaagagattgaa
ggagaagatgaagaattcgatgaaggagaagaagaaggagacgagcatggagcagaagaa
ccagaaggagaagaagacatgacatcagctcgaccaaggagaatgagtgaagtaccggcg
gcaagtacggtcaaaccgattccaaaggcttcttcgctgttcattttgagtcacacgaac
tcctttcgtgtcttctgtaacatggtcgtcaatcactcctacttcaccaacgcagttctt
ttctgtattctggtatcatctgctatgttagctgctgaagatccactacaggcaaactcc
accagaaatatggttctgaactactttgactatttcttcacatcggtcttcactgtggaa
ataactctgaaagtcatcgtcttcggattggtattccacaaaggatcgttctgtcgaaac
gctttcaatcttctcgatattcttgtcgttgctgtctccttgacatctttcgttctccga
accgatgcaatgtccgtcgtcaagattcttcgtgtgctccgtgtgttgcgtccacttcgt
gctatcaacagagccaaaggactgaaacatgtggtgcaatgtgtgattgtagctgtgaag
actatcggaaacatcatgttggtcacattcatgttacaattcatgtttgccattatcgga
gttcaattattcaaaggaaccttcttcctttgtaacgatctttcgaagatgacagaagca
gaatgtcgtggagaatacattcattacgaagacggagatccaacgaagccagtttcaaag
aaaagagtctggtccaacaacgacttcaatttcgataacgtcggagatgcaatggtttct
cttttcgtcgtttccacattcgaaggatggccacaacttctctacgtggcaattgattcg
aatgaagaagacaagggacctgttcacaattcaagacaagctgttgctctattcttcatc
gctttcatcattgtcatcgccttcttcatgatgaacatcttcgtcggtttcgttatcgtt
acgttccaaaacgaaggagaaagagaatacgagaactgtgaattggataagaatcaaaga
aagtgcatcgagttcgcattgaaagccaaaccacacagaagatacattccacgcaaccgt
cttcaatacagagtttggtggttcgtcacttcgagagctttcgaatacgtcattttcctg
attatcgtgatgaatacggtatcactggcatgcaaacattaccccagctcgcgaggattt
gaggactttttggatgtgttcaatttgattttcaccggagttttcgcatttgaagctgtc
ctcaaaatcgttgcattgaatcccaagaattacatctcggatcgatggaatgtgttcgat
ttactggttgtagtcggatcgttcattgatatcacctacggaaaattgaatccaggagga
acaaatctcatttccatcaacttcttccgtcttttccgtgtcatgcgtctcgtcaaactg
ttatctcgcggagaaggaattcgaactcttctctggacattcatgaaatccttccaagct
cttccgtacgtcgctttgctcatcgtcctgctctttttcatttatgctgtcatcggaatg
caattcttcggaaaagttgccctcgacgactccacatctatacacagaaacaataacttc
cattcgttcccggctgctattctggttttattcagatcagctaccggagaagcctggcag
gacattatgctctcgtgttcggaccgtgaagatgttcgttgtgatccaatgtctgacgac
tacagcaaaggaggatttaatgagtcaagatgtggaaacaactttgcttatccatatttc
atctcattcttcatgctttgctctttcctcgttatcaatctcttcgtcgccgttattatg
gataatttcgattatctcaccagagattggtcgattctcggacctcaccatctagaagaa
tttgtcaggttatggtcagaatacgatccagatgctaaaggaagaatcaaacatcttgac
gttgtcacattgctccgtaaaatatctccacccctcggattcggaaaactatgcccacat
cgtcttgcctgtaaacgtttggtatcaatgaatatgcccctgaactcggacggtaccgta
tgtttcaacgcgacactcttcgctctcgttcgtaccaatttgaagatctatactgaagga
aacatcgatgaggcgaacgagcaattgagatcagcaatcaaacggatctggaaaagaaca
cacaaagatttgttggatgaagtggtaccaccagcaggaaaagaagatgatgtgaccgtt
ggaaaattctacgccaccttcctcatccaggactatttccgaagattcaagaagcgaaag
gagatggaggcaaagggagtgctgccagctcaaactccacaagcgatggctcttcaggcc
ggacttcgcacactacatgaaatcggaccagaactgaagagagccatatctggaaacttg
gaaaccgacttcaactttgacgagccagaaccacaacacagaagacctcactctcttttt
aacaatttggtccaccgactctccggtgccggcgcgaagtctccaactgaacacgagcgg
ttggaaagaggagctacacttctcccatacgaagctcgttctttctccccaacacattct
cttgccggagccgaaggttcaccagttccatcacaaatgcatcgtggtgctccaatcaat
caatcgataaatttgccaccagtcaatggatccgctcgacgtcttcctgccctgccgccg
tacgcaaatcatattcacgatgagacggacgacggccccaggtatcgggatactggcgat
cgagctggatacgacccatcacagaaccgaatggtcgtggccaacagaaaatacgccgat
gcacgtgtcgttggtgcagcaagacgagaaatcgaggaagcgtatcaattaggtgaacaa
gaaatcgacatggccgctgactcattggcaccgttgatgcaacacgttggaatgcacgat
atccgtgatataaatgaaaattcacggagtgctcttctgagaccagctggagaatcatca
cgacgacaacatgattctcatggaggatcacaagaagatcttcttctggtgaccacactt
taa
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