Caenorhabditis briggsae (nematode): CBG_05938
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Entry
CBG_05938 CDS
T01054
Symbol
Cbr-itr-1
Name
(RefSeq) Protein CBR-ITR-1, isoform b
KO
K04958
inositol 1,4,5-triphosphate receptor type 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04070
Phosphatidylinositol signaling system
cbr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
CBG_05938 (Cbr-itr-1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CBG_05938 (Cbr-itr-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbr01009
]
CBG_05938 (Cbr-itr-1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_05938 (Cbr-itr-1)
Protein phosphatases and associated proteins [BR:
cbr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CBG_05938 (Cbr-itr-1)
Ion channels [BR:
cbr04040
]
Ligand-gated channels
IP3 receptor
CBG_05938 (Cbr-itr-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
xRRM
CENP-Q
Motif
Other DBs
NCBI-GeneID:
8575216
NCBI-ProteinID:
XP_045100902
WormBase:
CBG05938
LinkDB
All DBs
Position
IV:complement(7499433..7516371)
Genome browser
AA seq
2912 aa
AA seq
DB search
MNSSFGRVRKKVSIISIPEFVPDSHDNENVATSGGIVGDKTSSSAGGGGTRIEFDFDDFE
EQIMRKSSMNLPSRKLTIASSIDHGNNGNLHIGDIISLYTESSTNQEQRGFLSTLGLVDD
RCIVELKDGRPESPPKKFRDCLFKVCPVNRYAAQKHLWTEQKRFQTGDSMFDDDLMNKLR
VAAEKEREENEAEFQKTLGNIIQYGSMVQLLHVKSNKYITVQKNSPAKRERNAMKVYLDR
AGNEGSWFIIEPAYKHYAIGDNVSAGNKISLIPNAVSTTQTGHVKSQLHLSGLNLLDHQT
AAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFHADQQTFLTLDTIPKTNPPKDV
VFLRMTNRPSAADATSSRALWEVQVVQSNAYRGGTAKWNKTYRFKHLASDMYLTVEESQM
KAKPAMNGRPPLLSTLSQKSKILERTQSPLASMYSDGPNGGNDTSDASDGPTVSFLSPKK
SDFPEDDIKLLFELDPSTFMKSNKEVPRRSYVRLLHHKTASWVHATNANEKQNLHFSNKN
EKGWVKVICETHRVDKETFALLPVNPDEVRDLDFANDACKALRNFINLIKIGSVISKESL
NSTTQLLIDCILFVTNSSDHLADPLKITDFSPSRDRQKLLREQEVLHQVFLLLKAPFQPR
QGSTELGPLLGSPADLSDSRNEIFKTMFQLCYCLLKYSQVSYRKNQEFLAEKFGEIQEQI
GFDLMAEDTMTAVLHNNPKLLEKYVKAPHVERFVDLVRNNRQGKFLDYLADLCVCRGEAN
KKIQELICTSVLSDKHRDIFMDTKVINGEVEIGWDPNFRKLVDIAEGAKSNHDDVEHLDY
YRHQLDLLSQMCQEQQYLAIDPPVERGLMNISQQLPAELVLQCMSDTRLPYDLRGSFTRL
MLHLHVVRGSPMSAIRHARLWRSIPESVNVSTYESVSVEAYSDGSRMRIGASIAHKVLAT
VETYLMGLRDQPTDERHSVNSSKLTYEIVNLAKSLAQFNFYSFNELLQLTKNLLAIINEG
PVPEQVPSHQAMVNVIRNMSKSMLRGGNNKENSKDLAKTPSMSTDDAGRSKEGRALIVKT
KLIVAEILQFVMDVRRDYRITMALSWFKNEFPCDEDGSLMHSASINEKMASELYDAIYHS
SGHELHLDGKDGQLLLAILLQMTMSDYPPLTSIALKVLFRHFTQYQELLEDLKQVQLLVS
NDDVENYRQIDRDLFILKNLTEKSELWVHGDRNHSVETKEVEDKEKTTEYDLHMHQLNTP
RAFESRDSMDAVIAVINEHYSNFKNESLQLLNRLLINDDRNDEAVALQELSDKAPLIAYP
LIRQMLVRLKRMCYRDGKPDTMNQQLLKNMRVYEVVLEFISVPHDKKHDHEMMKLITLSH
EFLRDFCKANKENQSRLYKFISYEKDAKEGMLRVETVEEVGTLVAIFRNNRELASNVPEE
LIAHIVGLIEHNSRNPIFLELLQALVCVYDKEIESGQEKVANEICAASDEVRQLYVDNAS
FEELEAMMKQEKESRGRETESRKPLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIV
RVVTSKHCLVEVKTVYLQLLLHCYIDTDAEMKDAYKTEYVDNILNNLLEDIRSLRIDRLT
DAETVALEHYICHTVTEVLIKFFEAPYSALQQAKVDVHHHKKTFSEVLLELTSLERGKLK
STRSSRNWYRVAECIKRLTKWAEEHISLPATLVGPQMSATATVRQKWQNAATSAKLIGLN
KPVITLVVERLNRQNTLNPGHRLYGTSNSMTEHTSANVVTCYHMMIGEFKFYLHPLHAAE
GSVLVEVLHTPELLFPEGSALRDQCARGGVVAKLIQHCKTLMQNKQDNLCSRVLQTLCKM
CDCTKQQLTQQGRRFYNSSFEKGQQLRHLLLQRYFGHHNHHHPPLDRQQSKIGEVVEAVK
EKKEETWSQERDLYAIQCKLNDAGASDLVIDIIIMEPSREIFLKAIHLARALLHEGNDKV
QHSFYMRMKQKDIHEPFFKVILTRIQTAQNRLKSDMMSCSDSKPKPSSTVLTPLIDAGDT
GFNGTLFEVPQQVRHPSISEMSQLSNDLTHSIPDLTPYQDEDKSADALPPEVALVEPILR
VLQLLCENHNSLLQNFLRKQSDRTNHNLVSETLSFLDTVCGSTKGSLGVFGEIGEHNFSL
ITQTLATLTEFCQGPCHENQNTMAMQENGLNIIISLVLNEIKPLADDHMELALEIKSQAS
KLLLAIMESRHDGENANRVLRNMANMSGGPKQLVHAIKQAYEMTRSNHHMLKSVSRDLLR
RAEDDSKSKSGPQITVNTITLPEINVDASGIVSIHTEKSISSSLDDKFHEDDSPSVDPRE
VGHNIYILAHQLAIHDGELEIWLDGSDEKKDDLTREALNYYKERTAQIEIVRRDRTLERV
VFPINEICSFLTKETKDYVYNNTERDNQGSKVTEFFDQWETMYHEMIWQRKLQDRKWLSW
CAVRLPLWTRLSFQFAFIVNALVALYYPFPESTSSSISFGNLYSWLAVISAFLLAHFLRH
EKAYLSKTALLILSSLCFLLVNSIGVNLTLYFFGMLQLVNKVIHVLAFVSNKGLEDRPLS
EILGCRNLHYLLVYLTVCIAGFVIHPMIYCALLFDIIATEETLQNVIASVTRNYQSIVWT
GLLALILLYIFSILGFLFFRHDFYLEVDPVEPDSPASISGALPTDTCPKEGCPGLERTKD
NDDDDKKVKSCETLWMCILQTMYLGLRNGGGIGDVLRNPAPWEDMFVWRVAYDMTFFVVL
IVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRFDNRSVTFESHREMEHN
IWHYLYYIVMLQIKDETEFTGPESYVAQCVKERNLDWFPRMQALSLQDSELDTDQSEMKQ
MKDQMMQMMAMMRENQSQWDEVRAFMEQLQSR
NT seq
8739 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatcatttggacgggtcagaaagaaagtttccatcatctcgattccagaattc
gtaccggattcgcatgataacgaaaacgttgcaacaagcggtggaattgttggagataaa
acatcatcgtcggctggtggaggtggtactcgaatcgaattcgatttcgatgattttgag
gaacaaattatgagaaaatccagcatgaaccttccgagtaggaagcttaccatcgccagt
agtatcgatcatggaaacaatggaaatttacacatcggagatattatttccctatacaca
gaatcttccactaatcaagaacagagaggtttcttaagtacacttggattggtagatgac
agatgtatcgttgaactgaaagatggaagacctgaaagtccgccaaagaagttcagagat
tgccttttcaaagtttgcccggtgaatcgatatgcagcccaaaagcatttgtggacagag
caaaaaaggtttcaaacaggagattctatgttcgatgatgacttgatgaacaagttgaga
gttgctgctgaaaaggaacgcgaagaaaacgaggcagaatttcaaaagacgctcggaaat
attatacaatatggatcaatggttcaacttctccatgtcaaatccaacaaatacatcaca
gtacaaaaaaactcaccggccaagagagaacgaaatgcgatgaaggtctatctcgatcgt
gctggaaacgaaggaagttggttcatcattgaaccagcatacaaacattatgccattgga
gacaatgtatctgctggaaataaaatttccctaattcccaatgcagtatccaccactcaa
actggacatgtcaaatcgcaacttcatctttcgggactcaatctcttggatcatcagaca
gcagcagaagttaactgcttgaatgagcctaccgagtggcaggttttcatgtttcttttg
tttgacgaaaatcagcagaacagcgttaaatcgggtgatgtggtcagattgtttcatgca
gatcaacaaactttcctcacactggacactatcccaaagaccaatccaccgaaagatgtt
gtttttctgagaatgactaatcgaccatcagcagcagatgctacaagttctcgagctcta
tgggaagtacaggttgtccaatcaaatgcataccgtggaggaacagccaaatggaacaaa
acgtaccgtttcaaacatcttgcttccgatatgtacctgaccgtagaagaatctcaaatg
aaagcaaagccagctatgaatggaagacctcctctgctcagtacattatctcaaaaatcc
aaaattctggagcggacccaaagcccactggctagtatgtattctgatggtcctaatggc
ggaaatgatacctcggatgcatctgacggcccgaccgtcagctttttgtcacccaaaaaa
tcagatttcccagaagatgacattaaacttctgtttgaattggatccatcgacattcatg
aaatctaacaaagaagttccacgtcgttcatatgttcgacttctacatcataaaacagct
tcatgggttcatgcgacaaatgcaaatgagaaacagaatcttcatttcagtaataaaaat
gaaaaaggatgggtcaaagtgatctgtgagacacatcgagttgacaaagagacatttgct
ctgttgcctgtcaatccagatgaggttcgggaccttgattttgctaatgatgcctgcaaa
gctttgcgcaatttcatcaatctcatcaaaatcggttcagtaatctcaaaagaatctctg
aattccacaactcaactccttattgattgcattctcttcgttaccaactcctctgatcat
ctcgctgatccactcaaaatcactgatttctccccatcccgtgatcgtcagaagttgctc
cgtgagcaggaagttcttcatcaagtatttcttcttctcaaagcaccattccaaccacgt
caaggatcgacagaacttggtccacttctcgggtctccagctgatttgagtgatagccga
aacgagatttttaagacgatgttccagttgtgctattgtcttttgaagtactcccaagtc
agttatagaaagaatcaagagtttctggccgagaagtttggagagattcaagaacaaatt
ggttttgatctaatggcagaagacacgatgacagctgttcttcacaataatccgaagctt
ttggagaaatatgtcaaggctccgcatgttgagagattcgtcgatttggtcagaaataat
cgccagggaaaattcttggactacctagctgatctttgtgtatgtcgtggagaagcgaat
aagaagattcaagaactgatttgtacatctgttctcagtgacaaacaccgtgacatcttc
atggatacaaaagtgatcaatggagaagtggaaatcggatgggatccaaactttagaaag
ttggtcgacattgcagaaggtgcaaaatcaaatcatgatgacgtggaacatttggattac
tatcgacatcaacttgatcttctctcccaaatgtgtcaagaacaacagtaccttgccatt
gatccacctgtagaaagaggtcttatgaatatttctcagcagttgccagcggaattggtt
ctacaatgcatgtcagacacacgccttccatatgatcttcgtggatccttcactcgtctg
atgttgcatcttcacgtcgttcggggcagtccaatgtctgcgatccgacacgccagactt
tggcggagtatcccagaaagtgtgaatgtttccacatatgaatctgtgtctgtcgaggct
tattctgatggaagtcgtatgagaatcggtgcatcgatcgctcataaagttttggccacc
gtcgaaacctacttgatgggtctgagagatcagccaacagatgaaagacacagtgtcaac
tctagcaaacttacatacgagattgtgaaccttgccaaatctcttgctcaattcaatttc
tactcgttcaatgaacttctccaactcactaaaaatcttctggcgatcataaatgaaggt
cctgttccagaacaagttccttcgcaccaagctatggtcaatgtcataagaaatatgtca
aaatccatgttgagagggggaaataacaaggaaaattccaaagatttggccaagacgccg
tctatgtcaacagatgatgcgggtcgcagcaaggaaggaagagctctgatagtgaaaacc
aaactaattgtcgctgaaatattacaattcgtgatggatgtcagaagagattaccgtatc
acaatggcactttcttggttcaaaaatgagtttccttgcgatgaagatggatctttaatg
cattcagccagtatcaatgagaaaatggcttctgaactatacgatgcgatatatcattca
tccgggcatgaactccatttggatggaaaagatggacaactcttgcttgcaattcttctt
caaatgacaatgtctgactatcctccacttacaagtattgctctaaaagttcttttccgc
catttcactcagtatcaagagcttttggaagatttgaaacaagttcaactattagtatcg
aatgatgatgttgagaactatcggcagattgatagagatttattcattttgaagaatcta
acggagaaatctgaattatgggtgcatggagataggaatcattctgtggagacaaaggaa
gtagaagataaagaaaagaccacggaatatgatttacatatgcaccagttgaatactccg
agggcatttgaatcaagagactccatggatgccgtgatcgcagtcatcaatgagcattat
tcaaacttcaagaatgaaagtctccaacttctgaaccggctcctaatcaacgatgatcga
aatgatgaagctgtagcacttcaagagctcagtgataaggcccctttgattgcatatcca
ttgatccgtcaaatgctagttcgtctcaagagaatgtgctatagagacggaaagccggat
accatgaaccagcaacttctcaagaatatgagagtctacgaggttgttctggaatttatc
agcgttccccatgacaagaagcatgaccatgagatgatgaaactgataacgttgtctcat
gaattcttgagagacttctgtaaagcgaataaggagaatcaaagcagactgtacaagttt
atttcttacgagaaagatgcaaaagagggaatgcttcgtgtggaaactgtggaagaagtt
ggaactttggtagcgattttccgaaacaacagagaacttgcatcgaatgttccagaagaa
ctcattgctcatatcgttggacttatcgagcacaactccaggaatccaattttcttagaa
ctgttgcaagcgttggtatgcgtatacgataaggagatcgaaagtggacaagagaaagtg
gccaatgaaatatgtgcagcatcagatgaagtacgacaactgtacgtggataatgcatca
tttgaagaactagaagcaatgatgaaacaagaaaaagaatcaagaggtcgagagacagag
agcaggaagccactgaagtatcatatcgagttggttcggcttcttgcgatgtgtacacgt
ggaaagaatggaaatactgaattgaaatgtgcctcccaaattccaatggatcatatcgtg
agagttgtgacttcgaagcattgtctggtagaagtgaaaacagtatatctgcaactactt
cttcactgttacattgacactgatgctgagatgaaggacgcctacaagacagaatacgtg
gataatatcttgaacaatctccttgaggatatccgttctcttcgtatcgatcgactcaca
gatgctgaaacagtggctttggaacattacatttgtcacactgtcaccgaagtgcttatc
aagtttttcgaagctccgtattcagctcttcaacaagccaaagtggatgtgcatcaccat
aaaaagaccttctcagaagttcttctggagttgactagtttagaaagaggaaaactgaaa
agtacaagatcatcacggaactggtatcgagtggccgaatgcataaaaagactcacgaaa
tgggcagaggaacacatctctcttccagctactcttgttggtccacagatgtctgctact
gcgacagttcgtcagaaatggcaaaatgcagctacttcagcaaaactgatcggattgaat
aaaccagttataacgcttgtcgttgagagactgaacagacagaatactcttaatcccgga
catcgactctatggaacatcgaattctatgactgaacacacatctgccaatgtcgttacc
tgctaccacatgatgattggagagttcaaattttatttgcatccactacatgccgcagaa
gggagtgttctcgttgaagttcttcacactccagagctacttttcccagaaggatcagct
cttcgggatcagtgtgctcgtggaggagtcgtcgcaaaattgattcagcactgcaagacg
ttgatgcaaaacaaacaagacaatttgtgttctagagtccttcaaacactctgtaaaatg
tgtgattgcacaaagcaacaactaactcagcagggtcgtcgtttctataatagtagcttt
gaaaagggtcaacagcttcggcatcttctattgcaaagatactttgggcatcataatcat
catcatccacctctggacaggcagcaatcgaaaatcggagaagttgttgaagctgttaaa
gagaagaaagaggagacatggagccaagaacgagatctatatgctatccagtgtaagctg
aatgatgcaggagcttctgatcttgtcattgatatcatcataatggaaccgagtcgagag
atattcctgaaggcaattcacttagcaagagcacttcttcatgaaggaaatgataaggtt
caacactcgttctacatgagaatgaagcagaaagacattcatgagcctttcttcaaagtg
atcttaactcgaattcagacagctcagaacagattgaaaagcgatatgatgagttgcagt
gacagtaaacccaaaccttcatccactgttctaactcctcttatcgatgcgggtgatacc
ggtttcaatggaacactatttgaagtaccacaacaagttcggcacccatccatatcggaa
atgtcccaattgagcaatgatttgacacactcgattccggatttaaccccatatcaggac
gaggataaatccgctgacgctttacccccagaagtagcacttgtcgaacccattcttcgt
gtactacaacttttgtgtgaaaatcacaatagtcttcttcaaaacttcctccgcaaacaa
tctgatagaaccaatcataatttggtttctgaaacgttgagtttccttgatactgtatgt
ggatcaaccaaaggaagtctcggagtttttggagaaatcggagagcacaacttctcgctc
atcactcaaacacttgccacgttgacagaattctgtcaaggaccttgccacgagaatcag
aatacaatggcgatgcaagagaacggtttgaatattatcatttctctggtgttgaatgaa
attaaaccacttgctgatgatcatatggaattggcacttgagatcaaaagtcaagcttcc
aaactcctgttggctattatggaatcgagacatgacggagagaatgcgaacagagtattg
agaaatatggccaacatgtctggaggaccaaaacaattggttcatgctatcaagcaggca
tacgagatgacacgttccaaccatcacatgttgaaatcggttagcagagatctactgaga
agagccgaggatgattcaaaatcaaaatcaggtcctcagataactgtcaacacgatcact
ctacctgaaatcaatgtggatgcatctggaattgtatcgatccatacagagaagagcatt
tccagttctctggatgataaattccacgaagacgacagtccgagtgtggatccaagagaa
gtcggtcacaacatctacattcttgctcatcaattagccattcacgatggagaattggaa
atttggttggatggaagtgatgaaaagaaggatgatttgacgagagaagcactgaattat
tacaaggagaggacggcacaaattgagatagtgcgtcgtgatcgtacactggaacgggta
gtatttccaatcaacgaaatctgttcgttcctgacaaaagaaacaaaagactatgtgtac
aacaacacagaaagagacaatcaaggttcaaaagtcaccgaattctttgaccaatgggag
acaatgtaccatgaaatgatatggcaaaggaaactacaagacagaaaatggctctcttgg
tgtgctgtccgattacctctttggacacgattgtcgtttcaattcgctttcattgtgaat
gcactcgtcgctttatattatcccttcccggagtccacaagctcctcgatctcattcggc
aacttatacagttggcttgccgtaatcagtgcattcctgctcgctcatttcctccgacat
gaaaaagcttacctttcgaaaacggctcttctcatactttctagtctctgtttcttgtta
gtcaattctattggtgtcaacttaacgctttactttttcgggatgctacagctagtcaac
aaagtgatccatgtgcttgcattcgtgagcaacaaaggattagaagatcgacctctgagt
gaaatacttggatgtcggaatctgcattatcttctggtctacttgacagtttgcatagcg
ggtttcgtgattcatccaatgatttattgtgcactacttttcgatataattgcaaccgaa
gaaacacttcaaaatgtcatcgcttctgttacaagaaactatcaatccattgtgtggact
ggtcttcttgctttgattcttctctacatcttctctattctcggattccttttcttccgt
cacgatttctatttggaagtggatccagttgaaccagattctccagcttctatttctggc
gcattaccaactgacacgtgtccaaaggaaggttgtcctggattggaaaggacaaaggat
aacgatgatgatgataagaaggtgaaatcatgtgaaacactgtggatgtgtattctacaa
acgatgtatcttggactcagaaatggaggtggaatcggagacgtcctcagaaatccagcc
ccttgggaagatatgttcgtttggagagttgcttacgacatgactttcttcgttgttctt
atcgttattgttctcaatttgattttcggagttatcatcgatacttttggagatttgaga
gctgagaaaaacgaaaaagagcagattcttaagaacaactgtttcatttgcggattggat
cgatctcggtttgataacagatcagtgacatttgaatctcatcgagaaatggaacacaat
atttggcattatctttattacattgtaatgcttcaaatcaaagatgaaaccgagtttacg
ggtccagaaagttatgtggctcaatgtgtgaaggagcgaaatttggattggttcccaaga
atgcaagctctatcccttcaagactctgaactggatacggatcaatccgaaatgaagcaa
atgaaagatcagatgatgcagatgatggccatgatgcgagaaaaccaaagtcagtgggat
gaggttcgagcctttatggagcagttacaatctcgctag
DBGET
integrated database retrieval system