Caenorhabditis briggsae (nematode): CBG_05960
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Entry
CBG_05960 CDS
T01054
Symbol
Cbr-dnc-1
Name
(RefSeq) Protein CBR-DNC-1
KO
K04648
dynactin 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
CBG_05960 (Cbr-dnc-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_05960 (Cbr-dnc-1)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_05960 (Cbr-dnc-1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbr04812
]
CBG_05960 (Cbr-dnc-1)
Membrane trafficking [BR:
cbr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
CBG_05960 (Cbr-dnc-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
CBG_05960 (Cbr-dnc-1)
Cytoskeleton proteins [BR:
cbr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
CBG_05960 (Cbr-dnc-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
DUF3568
Motif
Other DBs
NCBI-GeneID:
8575236
NCBI-ProteinID:
XP_045093110
WormBase:
CBG05960
LinkDB
All DBs
Position
IV:7439356..7444702
Genome browser
AA seq
1325 aa
AA seq
DB search
MSFEIGTRVKTSSGNGKVVFAGQTQFAEGEWIGVILDTPTGKNNGTVKDVAYFQCEPNYG
VFVKASAVELEDTVKRSGLKAPTASAIRKDSSVMSRSAGSKASPGSSPGISPAASSEKLS
GRQTGMGPRSVSKLVDPNESRMVREFSNLSQSSVASSRASASTSKPRPQFTAPDAASRRQ
SLAPPKKVSTTVPPAKNNSIAKPRQSMAPSKPTEETKPAESETEVPNELPPPTMTESGTV
LPNESVLSRAKKIDDTGPAAPMSPISTTSAAAHPRTTSISSNIDHSTELEYLRIQVKELT
DKLETTRAKRKDDHAKLLEFERISIEHRTLQDVKSRLNDKVVELERQLLEERRSAEELRA
WHEDNKNSIEESKELMEMATIEKELAEEKADVAEIKINELTEELEKMRVKLGLLEDEMAN
GGGGAQVGNTVQMRQIEMQNDKLKDALIKMRDLSAQAKLDQQKAVEEAERLKNENSELIR
VAENLKRQAEIAESKIAGFQEQIDAAMGAEAMVTQLTDKNFNMEERIAQLEETIEDMEEA
KDLDEQLAEVQKQQEKDLMKEIEQLKIHIHELNGRIRDEQKHAAELSQTILKFRERMANL
NSQIQDQKDQILSLEEQVHGQTTEDNDRATMFNQLQISANRNFSEIVERQINAIEVEYAR
RQAGYLKAFLPDNFARVGGENDSILLVVLLPRLSAKATLFATLAAQCYPQVPGGMRREHV
TKSHKGEQWAHVARVSYLANSIVAAVGKLESAVGETTVEALIKLTESYGEMATHERAIDQ
YLELLKTSRFDENTSLDGFIRPLAYFQMIFSLQFGGDGFNASQWISSVCSSLTAGLAYCR
VNTQRISYFLQESVNAGEVFNLLQSLNDEFAACESVILKAARLLPNGSDPRKIIKLESDF
TDELLNAVAQLDKMASTLQEVCTNGAHNFGGISETEGFDDKRVKEMIHSVVAKSSGYIAI
ENTFDPIRTTMRSLRDSLEKVNSTLESAKMEHVAPEKKTFPPLLDRAHHRKQAAQEAEGL
RWQMEKKDNEMLELRKQIKARIEDVSNFKLRLDMAESRLNSTDKAEGDKVKHLEEKINQM
VADHRRKQIIFKFSEFDESMDALQREMKEVEGENLELKQRANKISKEALWKNIHAMETRS
AGAPTAPSSSSVVEEGSASRGEVVFLENQLNKQTDARKRAELEIRKLKGELAQSGSKRFS
TVPGLISGPVTLESQTRQDLLLKLLDNLHDESLRLRREEVSHQTYVPSNPKISTERMLEE
MEKFNAKREQFYDKLNSVNRRLRRVWFDAWGEEYPFDIATSIRSAPPVPESKKFDEVSAK
WGIVW
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgaaataggaacccgggtcaaaactagctcgggaaacgggaaggtagtcttc
gctggccagacgcagtttgccgaaggtgaatggatcggagtcattttggataccccaact
ggaaagaataacggaacagttaaagatgttgcatatttccaatgcgaacctaattacgga
gtttttgtcaaagcaagtgctgttgaacttgaagatacagtaaaaagatccggattgaaa
gctccaacagcttcggcgattcgcaaagactcgagtgtaatgagtcgatctgcaggatca
aaagcatctccagggtcgagtcctggaatttcaccagctgcatcgtcggagaagttatcc
gggcggcagaccggaatgggtccacgttcagtgtcaaagctagtagatcccaacgagtca
agaatggtccgtgaattctccaacttatcacaatcttccgttgcttcgagtcgtgctagc
gcatctacatctaaacctaggcctcaattcaccgcaccagatgcagcttcaagacgacaa
agtttggcgcctccaaagaaagtttcaacaacagtgcctcctgcgaaaaataattccatt
gcaaagccgcgacagtcaatggcaccgagtaaaccaacagaggagacgaaacctgctgaa
tctgaaacagaggttccaaatgaattgccacctccaacaatgacagaatctggaacagta
ctccccaacgaaagtgttctttcacgagctaaaaagatagatgatacgggaccagctgct
ccaatgtcacctatctccacaacttctgctgctgctcatccacgaacaacttcaatttct
tcaaacatcgaccattccaccgaactagaataccttcgaattcaggttaaagaactcacc
gataaactagagacaacaagagcaaaacgaaaagacgatcatgcaaagcttctcgagttc
gagcgaatttctattgagcacagaactcttcaagatgtgaaaagtcgattgaatgacaaa
gtggttgagctagaaagacaacttctcgaagagagaagatccgctgaagagctgagagct
tggcacgaagataacaagaattcaattgaggagagcaaagaattgatggaaatggccact
attgaaaaggagctggccgaggaaaaagctgatgttgctgaaattaaaatcaacgaactc
acggaagaattggaaaagatgagagttaagctgggacttttagaagacgaaatggcaaac
ggtggaggtggtgctcaagttggaaacacagttcaaatgagacagattgaaatgcagaat
gataagctgaaagacgctcttatcaagatgcgtgatttgagtgctcaagctaaacttgat
caacaaaaggcagtggaagaagctgaaagattgaagaatgagaattctgaactcattcga
gtcgcagagaacctcaagagacaagctgaaattgctgaatccaagatagccggattccaa
gagcagattgatgctgccatgggtgctgaagcaatggttactcagctaacggataaaaac
ttcaacatggaagaacgtattgcgcagcttgaggagacgatagaagacatggaagaagct
aaagacttggatgagcaacttgctgaagtacaaaaacaacaagagaaagatctcatgaag
gaaatcgagcaactgaaaattcatatacatgaactgaacggacgcatacgagatgaacaa
aagcatgctgccgagttgtcccaaactattttgaagttccgagaaagaatggcaaatttg
aattctcaaattcaagatcagaaggatcaaattttgagtcttgaagagcaagttcatggt
caaacgacggaagataacgatcgggcaacaatgttcaaccaacttcaaatttcggcgaac
cgcaatttctcggaaatcgtcgagcgacagatcaatgcaatcgaggttgaatatgcccgt
cgccaggctggatacttgaaggcgttccttcctgataattttgctcgtgttggaggagaa
aatgactcgattcttttagttgtcttgcttccacgcctctctgcaaaggcaacgttattc
gctactttagctgctcaatgttatccacaagttccgggaggaatgcgtcgtgagcatgta
acaaagtctcacaagggagaacaatgggctcacgtggcacgtgtctcgtatcttgcaaac
tccatagtcgctgctgtcggaaaattagaaagtgccgttggagaaactactgtagaagcg
ctgataaaattgacagaaagctacggtgagatggcaactcacgaaagagcaattgatcaa
tacttggagcttctcaaaacttctcgtttcgacgagaatacttctcttgacggattcatc
cgtcctctcgcctacttccagatgattttttcgttacaatttggtggtgatgggttcaac
gcttcacaatggatttcatcagtttgttcgtctctcacagcaggtctcgcgtattgtcgg
gtgaatacccaaagaatttcctacttcttacaggaatcggttaatgctggagaagtgttc
aatctccttcaatctctaaacgacgagtttgctgcttgcgagtctgtaattctgaaagca
gctcgacttctcccgaatggaagtgacccacgaaaaattatcaagttggaaagtgatttt
accgatgagcttctcaacgctgttgcccagcttgataaaatggcgtccacacttcaagaa
gtttgtacaaacggagcacacaattttggtggaatttcggagacagaaggatttgacgat
aagagagtcaaagagatgatccattcagttgttgccaagagcagtggatacattgcaatc
gagaatactttcgatcctattcgcacaacgatgaggtctcttcgcgatagtctcgagaaa
gtgaattccactttggaatctgctaaaatggagcatgttgctccggagaagaagacattc
ccacctcttctcgacagagcacaccatcggaagcaagcagctcaagaagcagaaggactt
cgttggcaaatggaaaagaaagataatgagatgttggaattgcgtaagcaaatcaaggca
cgaatcgaagatgtatcaaacttcaagttacgattggatatggcagagtctcgtttgaat
tctactgataaggcagagggagacaaggtgaagcatttggaagaaaagataaaccagatg
gtggctgatcacagaagaaaacaaataatttttaaatttagtgagttcgatgaatcgatg
gatgcactacaacgagagatgaaagaagtcgaaggggagaacttggaactgaaacaacgt
gctaacaagatcagcaaggaagctctttggaaaaacattcatgccatggagacgcgatcc
gcaggtgctcctactgccccaagttcgtcgtcagtagtagaggaaggcagtgcgagtaga
ggagaagttgtgttccttgaaaatcagttgaacaagcagacggatgccagaaagcgagca
gagctcgagatcagaaaactcaaaggagaactagcccaatctggatcgaaacgattctca
actgttccaggattgatctcgggaccagttactttggaatctcaaactagacaagattta
ttactaaaactcttggacaatcttcatgatgaatccctccgtttgcgacgcgaagaagtc
agtcatcagacttatgtaccttcgaatccaaaaatttcaactgagagaatgttggaggag
atggagaaatttaatgctaaacgcgagcagttttatgataagctcaactcggttaatcgc
cgtcttcgtcgtgtatggttcgatgcatggggagaggagtatccatttgatattgccact
tctattcgatcagctccaccggttccagaatccaaaaagttcgacgaagtcagtgcgaaa
tggggaatagtttggtag
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