KEGG   Caenorhabditis briggsae (nematode): CBG_05961
Entry
CBG_05961         CDS       T01054                                 
Symbol
Cbr-lsm-7
Name
(RefSeq) Protein CBR-LSM-7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03018  RNA degradation
cbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CBG_05961 (Cbr-lsm-7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CBG_05961 (Cbr-lsm-7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_05961 (Cbr-lsm-7)
   03041 Spliceosome [BR:cbr03041]
    CBG_05961 (Cbr-lsm-7)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CBG_05961 (Cbr-lsm-7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CBG_05961 (Cbr-lsm-7)
Spliceosome [BR:cbr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CBG_05961 (Cbr-lsm-7)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 8575237
NCBI-ProteinID: XP_002633240
WormBase: CBG05961
UniProt: A0AAE9AHG9 A8X183
LinkDB
Position
IV:complement(7437120..7438008)
AA seq 103 aa
MSKDDGKRKKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQ
NPSVIGDETRPLGLIVARGTAITVVSPADGLEQIANPFAGQEE
NT seq 312 nt   +upstreamnt  +downstreamnt
atgtcgaaagacgacggaaaacgcaagaaagagtcagttgtcgatctaaccagattcctc
gataaagagattcgtgtgaagttccaaggagggcgcgaagccagcggagttctccgagga
tttgaccagcttctcaacatggtactcgacgactgccgagaatacctccgtgatcctcag
aacccatcagttattggtgacgagacaagaccgctgggcctcattgtggctcgtggaacc
gccatcactgtggtcagcccagccgacggactcgagcaaattgctaatccattcgccggt
caggaagaatga

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