Caenorhabditis briggsae (nematode): CBG_06001
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Entry
CBG_06001 CDS
T01054
Symbol
Cbr-atg-7
Name
(RefSeq) Protein CBR-ATG-7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04136
Autophagy - other
cbr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CBG_06001 (Cbr-atg-7)
04136 Autophagy - other
CBG_06001 (Cbr-atg-7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_06001 (Cbr-atg-7)
04121 Ubiquitin system [BR:
cbr04121
]
CBG_06001 (Cbr-atg-7)
03029 Mitochondrial biogenesis [BR:
cbr03029
]
CBG_06001 (Cbr-atg-7)
Membrane trafficking [BR:
cbr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
CBG_06001 (Cbr-atg-7)
Atg8 conjugation proteins
CBG_06001 (Cbr-atg-7)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
CBG_06001 (Cbr-atg-7)
Mitochondrial biogenesis [BR:
cbr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
CBG_06001 (Cbr-atg-7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
8575269
NCBI-ProteinID:
XP_045093099
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All DBs
Position
IV:7322508..7324709
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AA seq
671 aa
AA seq
DB search
MATFVSFKTYLDTPFWREVNKRKLHEWKLDETPKPIFSQLSLCKSISYDGKKILTNSGER
NSDHCRLSLSHDSFKPSNGNPNEVSISGNLILYNTRESFKAAATTKSLEELMKTEATKIW
DVITTKTWLQTPHLLSSFTIIAFADLKKFHYIYKTFIPSLKYPKNPEQEAWLRFLIVNVI
FLFQIPSLSTDESSLLTYYKRTLAPVFLFSKSSQEPLEIAHLESQVNPDDVLIVVADPSP
NPSSAGRLVKNVVAAVAYLHSSWDHCNVISLRSSGSIEIKYSWPANADAVAQNVVPQCSG
WEQHYSADLSKQFDPKIMMEEAVNLNLSLIKWRLNPDLKLERYSTLKVLILGAGTIGCNL
ARGIMAWGVRHISFVDNSFVSYSNPVRQSLSKFEDARKRRGKAETAVDALKEIFPSVQAF
GYQLTVPMPGHTIDEKDEEQLEKDVRQLEDLIKNHDVVFLALDSREARWLPTVMASIHRK
IAISVAIGFDTYVIIRHGIGLRKDSLSEDVNSEAVPYSQLSCYFCSDVTAPGNSTSDRTL
DQQCTVSRSGLSMIASGFAVELLASILQHPDPLAAPASLDDNITLLGAVPHQIRGFLHRF
QQIHPSVKRFEKCVACGDLIADRFQKNGWKFVRDVMNSPKHLEEVTGLDELQESVEAIDI
DFDDDESVVSV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttgtatcattcaaaacgtatttagatacgccattctggagagaagttaac
aagagaaagctccatgagtggaaacttgatgagactcctaaaccaatattcagtcaattg
tcactttgtaagagtattagttatgacggaaaaaaaattctgacgaattcaggtgaacgg
aacagcgatcattgcaggctctcgctgagccatgacagtttcaaaccatcaaacggcaat
ccgaatgaagtgtcgatttccggaaacctcattttgtacaacactcgggagagttttaaa
gcagctgcaaccaccaaaagtcttgaagaactcatgaaaacagaagcaaccaagatttgg
gacgttatcactaccaaaacctggcttcaaactcctcatcttctctcgtcattcacgatc
atcgcgtttgctgatctgaaaaagtttcattacatctataagacttttattccatcgttg
aagtatccaaaaaatccagagcaagaggcatggctccgttttttaattgttaatgttata
ttcttgttccagattccttcgctctctacagatgagtccagtcttcttacgtactacaaa
cgaacccttgctccagtttttttgttctccaaatcttcacaagaaccgctcgaaattgca
catctcgaaagtcaagttaatccagacgacgttctgattgtagtggctgatccatctcct
aacccctcctctgctggccgtttggttaaaaatgtggtagcagctgtggcatatctgcat
tcctcttgggaccattgtaacgtaatcagtttgagatcaagcgggagtatcgaaatcaag
tactcctggccagcaaatgcggatgcagtcgctcagaatgtcgttccacagtgttctgga
tgggaacaacattattcggcagatctcagcaagcagttcgatccaaagatcatgatggaa
gaagctgtgaacttaaatttgagcctgatcaagtggagattgaatccagatttgaaactg
gaaagatactcgacgctgaaagttctcattctgggtgccggtactattggatgcaatcta
gcacgtggaattatggcttggggtgtccgtcatatatcgtttgtagataactcatttgtc
agctacagtaatccagttcggcaaagtctctcaaagttcgaagatgctcgcaaacgacgg
ggaaaagcagaaacagccgtggacgctcttaaagaaatcttcccatctgttcaagcattc
ggatatcagcttactgtaccgatgccaggacatactattgatgagaaagatgaagagcaa
ttggagaaagatgttcgccaacttgaagatctgattaaaaatcatgatgtcgtattcttg
gctctcgattccagagaagctcggtggcttccaactgtcatggcttccattcataggaaa
atcgcgattagtgtggctattggatttgacacttatgtcataattcgacacggaattggc
ttgagaaaagacagtttatccgaagatgtcaactcggaagctgtgccatattctcaactg
tcgtgctacttctgcagcgatgtcaccgctccaggaaactcgacatcggatagaacattg
gatcaacagtgcaccgtttcacgttctgggttatccatgatcgcttctgggttcgctgtg
gagttgcttgcttctattctccagcaccccgatccactagcagcacctgcaagtctcgat
gacaacataactcttcttggtgcggtaccacatcaaattcgtggtttccttcacagattc
caacaaattcatccaagcgtcaagcgattcgagaagtgtgttgcatgcggagacttgatt
gctgataggttccagaagaatggatggaagtttgtacgtgatgtcatgaactcaccaaag
catcttgaagaagtcaccggactagatgagcttcaggagtctgttgaagctattgacatt
gacttcgacgatgacgagtcggttgtttcagtttga
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