KEGG   Caenorhabditis briggsae (nematode): CBG_06016
Entry
CBG_06016         CDS       T01054                                 
Name
(RefSeq) Protein CBG06016
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CBG_06016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_06016
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_06016
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     CBG_06016
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     CBG_06016
  Chromatin remodeling factors
   BAF complex
    CBG_06016
   PBAF complex
    CBG_06016
   GBAF(ncBAF) complex
    CBG_06016
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C BRK Bromodomain HSA ResIII DEAD QLQ HDA2-3
Other DBs
NCBI-GeneID: 8575284
NCBI-ProteinID: XP_045093094
WormBase: CBG06016
UniProt: A8X136
LinkDB
Position
IV:complement(7280038..7284588)
AA seq 1380 aa
MTDVTVAVNLSIGDFPLFLPYQQILLLLQNPLINVNKDSFKVDMSAAQPPILASVMADGQ
PSSDTPKPDQALTKLDKVLSEMQDRGLQNDPRYAEVLLLKQKLQRGIQNNSSNVGSSSSE
KKELSTSQLSQLKSQVVAYRLLARNEKVPENLIANAVQLPPKKTTMLPEPFKYPGEAENG
EKLPYDLIKVLSLHQARSKRETTVSAPPGIDPIEMLMQRENMVHNKIGLRLQVLKNFPAD
MPEHIKLKAEIELRAIRLLNLQTQVFMKLLSVRKDVMSCMQRDTLLETSLNPQAYRRMKR
QTLREARITEKLEKQLKLEQERNRRQKHTDLMYAIVQHSRDFKEYHRNILMKTARTRKAV
TTYHQNNERERKRDEIRNEKLRMQKLMQEDEEGYRALLDEKKDQRLVYLLQQTDEYVDSL
CSLVRQHQTTEKKKKREDRQRDQLDEEVHVHVRERSTGKILTGTDAPKPEEVEYWLETHP
EYEIIPRDQLSDDDGDDEEEVAEEVIEEEKDDQYAGMDDETKAKMIIEKARNEEDEYDQR
TKKQMADYYATAHRVKEKVVKQHSTMGGGDPNLLLKPYQLKGLEWMVSLHNNNLNGILAD
EMGLGKTIQTISLITYLMEVKQNKGPYLVIVPLSTLSNWQSEFAKWAPSVSAITYKGTKD
ARRLAEGAIRKGNFNVLMTTYEYVIREKALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNG
YFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELSQE
ETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDMSALQKVIYRHMKRGYLLDS
KSSCGARSLMNTIIHLRKLCNHPFLFQNIEESCRSHWNVNFVSGVNLIRVAGKLELLDRI
LPKLKATGHRVLMFFQMTTMMTIFEDYLNFRQYTYLRLDGSTKPDERGELLKMFNAPDSK
YFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITAN
SVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEDIIRADGEEEEDEEVPDDET
VNQMVARSEDEFSLFQSMDIDRRREESLQQNRKPRLLEEMEIPDDIVKLSFNYEEMEKAR
EEGREVVDQTPNQRRRRKEIDYASDLMTEEQFMRQVEEVEDENERIALEKRKQRKRKMAG
LDENDVSMDNVIQQPKRVKTDPELARSVNDMIAVILVYEDDGGYRIADPFKKLPTRRELP
EYYQIIATPMDFDRLKRKLSTGRYQTLEDVNTDMELLVNNAQIFNQEGSELYENSKIIGK
LWKEQYDKVNHNISAGPDSPQGSSKSDPMSSEWNREISSGPLTSAPPSMKMLKKELEEGQ
NT seq 4143 nt   +upstreamnt  +downstreamnt
atgacagatgttacggtagctgtaaatttatcgatcggcgattttcctctttttcttcct
tatcaacaaatattattattgttacagaacccactaatcaacgtaaacaaagatagcttc
aaggtagatatgagcgctgctcaacctccaatactggccagcgtaatggcagatggtcaa
ccgagcagcgatactccaaaaccagatcaagctcttacgaagttagacaaagtcctttcc
gaaatgcaagatcgtggtctacagaatgatccgcgttatgcggaagttttgctactgaaa
caaaaacttcaacgaggaattcagaacaattcatccaatgtgggaagtagttcgtcagag
aaaaaagagttgagcacatcccagttatcccagctgaaatctcaagtcgttgcatatcgt
ctcctggctcgaaatgagaaggtccctgagaatttgatagctaatgctgtacaacttcct
ccaaagaagactacgatgttaccagaaccattcaaatatcctggcgaagcagaaaacggc
gaaaaattgccatatgatttgataaaggttctcagtctacatcaagcacggagcaagcgg
gaaacaacagtttctgctccacctggaattgatccgattgagatgctaatgcaacgagaa
aatatggtccataacaaaatagggcttcgtttgcaagtcctcaaaaattttcctgccgat
atgccggaacatataaaactgaaagccgaaatcgagttacgcgcaatacgtttgctcaat
ttgcaaacacaggtattcatgaagttgctctctgttcgaaaagacgtaatgtcttgtatg
caacgcgatactcttctggaaacatcgctgaacccccaagcttatcgacgcatgaaacgt
cagacccttcgcgaagctcgtatcaccgaaaaactggagaaacaactaaagttggagcaa
gagagaaataggagacagaagcataccgatttgatgtatgcaatcgttcaacactcaaga
gatttcaaggagtatcaccgaaatattctaatgaaaacagcaagaaccagaaaagctgtt
acaacataccatcaaaataacgagcgagagcgcaaaagagatgaaattcgcaatgaaaag
ctgcgaatgcaaaaactcatgcaagaagacgaagaaggttaccgtgcacttctcgatgaa
aagaaagatcagcgactggtgtacctacttcaacaaactgatgaatacgtcgactctctt
tgttccttggttcgccagcatcaaacgactgagaagaaaaagaaaagagaagacagacag
cgagatcaactcgatgaagaagtccatgttcatgtaagagaaagaagtaccggaaaaata
ctgacaggaactgatgctccaaaaccagaagaagttgaatattggcttgagacacaccca
gaatatgaaataattccacgagatcagctcagtgatgatgacggtgatgatgaggaagaa
gttgctgaagaagtaatcgaagaagaaaaagatgatcagtacgccggaatggacgacgag
acaaaagcaaagatgattatcgaaaaagctcgtaatgaagaagacgaatatgatcagaga
accaaaaagcagatggctgactattatgcgacggcacacagagtgaaggaaaaggtcgtc
aaacaacattctacgatgggtggcggtgatcctaatctcttgctgaaaccttatcagcta
aaagggttggagtggatggtctcgctgcacaacaacaatttaaatggaattcttgcagat
gaaatgggtctcggaaagacaattcaaacaatttctctaatcacctatttgatggaggta
aaacaaaacaaaggaccatatctcgttattgtcccactgtctactctttcaaactggcaa
tccgaatttgcgaagtgggctccgtctgtatcagcaattacttacaagggaaccaaagat
gctcgtcgtcttgcagaaggagcaatcaggaaaggcaacttcaatgtattgatgacaacc
tatgaatatgtaattcgagaaaaggcgctgcttggaaaaattagatggaagtatatgatt
atcgatgaaggtcatcgtctcaagaatcacaattgcaagttgacattgatgctcaatgga
tattttcacgctcaacatcgtttgcttctcaccggtactccgctccagaacaagctacca
gaactatgggcgcttctcaacttcctgctcccctccattttctcatcttgtggaacattc
gaacaatggttcaatgctccattcgccactacaggagaaaaagtggagttgagtcaagaa
gagactatgctcattatcaggaggcttcataaagttcttcgtccgtttttgttgagacgt
cttaaaaaagaagtagagtcacagctgccggataaaactgaatacgttatcaaatgtgat
atgtcggctcttcaaaaagtcatctatcgtcatatgaaacgtggatatctgcttgattcg
aaatcgtcatgtggagctcgttccttgatgaatacaatcattcaccttcggaaactttgc
aatcatcccttcctattccaaaatattgaggaatcgtgtcgaagccattggaatgtgaat
ttcgttagtggagtcaatttgattcgtgtggcaggaaaactggagcttctggatcgtatt
ttgccgaaacttaaagcaactggtcatcgtgtattgatgttcttccagatgacgacaatg
atgacaattttcgaagattatttgaatttccgacaatacacttatctccgtttagacggt
tcaacaaaaccagatgaacgtggagagttactcaaaatgttcaatgctccagacagcaaa
tacttcctcttcatgctttcaacaagagctggaggacttggtctcaacttgcaaacggca
gatactgttattattttcgactcggactggaatcctcatcaagatatgcaagctcaagat
cgtgctcatcgtatcggacagaaaaaagaggttcgagttcttcgactgattacggcaaat
tctgtcgaagagaagattttggccgctgcccgttacaagttgaatgtagacgagaaggtt
attcaagctggtaaattcgatcaacgttcaactggtgctgaacggaaacaaatgctagaa
gacatcattcgagccgatggagaagaggaagaagatgaagaagtgccggatgatgagact
gtgaatcaaatggttgctcgatctgaagacgagttcagcttattccaatccatggacatt
gatcgcagacgagaggaatctcttcagcagaatcgaaagccacgtctattggaagagatg
gagattccagatgatatcgtcaaattatccttcaactacgaagagatggaaaaagccagg
gaggaagggcgcgaagttgttgatcaaactcccaatcaacgaagacggcgtaaagagatt
gattacgcatccgatctgatgaccgaggagcagttcatgcgacaagtagaagaagtcgaa
gatgaaaacgaaagaatcgctttggagaagagaaagcagcgtaagaggaaaatggcagga
ctagatgagaatgacgtgtcaatggataatgttattcaacaacctaaaagagtgaagact
gatccagagttggcacgatcagtcaatgacatgattgctgtaattttggtttacgaggac
gatggtggttaccgtatcgcagatccgttcaaaaaactaccaactcgcagagagcttccg
gaatattatcaaattattgcaacaccaatggattttgataggctcaaaaggaaactgtct
accggtcgctatcagacactagaggacgttaacacagatatggaactactcgtgaataac
gctcaaatcttcaatcaggagggtagcgaactttatgaaaactcgaaaatcattggaaag
ttatggaaggagcaatatgataaggttaaccataatatcagcgcgggaccggacagccca
caaggctcatccaagagcgatccaatgagcagcgagtggaatagagaaatttcttctggg
ccgcttacgtccgcccctccatcaatgaaaatgctgaagaaggagttagaggaaggacaa
taa

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