Caenorhabditis briggsae (nematode): CBG_06016
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Entry
CBG_06016 CDS
T01054
Name
(RefSeq) Protein CBG06016
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CBG_06016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_06016
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_06016
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CBG_06016
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
CBG_06016
Chromatin remodeling factors
BAF complex
CBG_06016
PBAF complex
CBG_06016
GBAF(ncBAF) complex
CBG_06016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
BRK
Bromodomain
HSA
ResIII
DEAD
QLQ
HDA2-3
Motif
Other DBs
NCBI-GeneID:
8575284
NCBI-ProteinID:
XP_045093094
WormBase:
CBG06016
UniProt:
A8X136
LinkDB
All DBs
Position
IV:complement(7280038..7284588)
Genome browser
AA seq
1380 aa
AA seq
DB search
MTDVTVAVNLSIGDFPLFLPYQQILLLLQNPLINVNKDSFKVDMSAAQPPILASVMADGQ
PSSDTPKPDQALTKLDKVLSEMQDRGLQNDPRYAEVLLLKQKLQRGIQNNSSNVGSSSSE
KKELSTSQLSQLKSQVVAYRLLARNEKVPENLIANAVQLPPKKTTMLPEPFKYPGEAENG
EKLPYDLIKVLSLHQARSKRETTVSAPPGIDPIEMLMQRENMVHNKIGLRLQVLKNFPAD
MPEHIKLKAEIELRAIRLLNLQTQVFMKLLSVRKDVMSCMQRDTLLETSLNPQAYRRMKR
QTLREARITEKLEKQLKLEQERNRRQKHTDLMYAIVQHSRDFKEYHRNILMKTARTRKAV
TTYHQNNERERKRDEIRNEKLRMQKLMQEDEEGYRALLDEKKDQRLVYLLQQTDEYVDSL
CSLVRQHQTTEKKKKREDRQRDQLDEEVHVHVRERSTGKILTGTDAPKPEEVEYWLETHP
EYEIIPRDQLSDDDGDDEEEVAEEVIEEEKDDQYAGMDDETKAKMIIEKARNEEDEYDQR
TKKQMADYYATAHRVKEKVVKQHSTMGGGDPNLLLKPYQLKGLEWMVSLHNNNLNGILAD
EMGLGKTIQTISLITYLMEVKQNKGPYLVIVPLSTLSNWQSEFAKWAPSVSAITYKGTKD
ARRLAEGAIRKGNFNVLMTTYEYVIREKALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNG
YFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELSQE
ETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDMSALQKVIYRHMKRGYLLDS
KSSCGARSLMNTIIHLRKLCNHPFLFQNIEESCRSHWNVNFVSGVNLIRVAGKLELLDRI
LPKLKATGHRVLMFFQMTTMMTIFEDYLNFRQYTYLRLDGSTKPDERGELLKMFNAPDSK
YFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITAN
SVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEDIIRADGEEEEDEEVPDDET
VNQMVARSEDEFSLFQSMDIDRRREESLQQNRKPRLLEEMEIPDDIVKLSFNYEEMEKAR
EEGREVVDQTPNQRRRRKEIDYASDLMTEEQFMRQVEEVEDENERIALEKRKQRKRKMAG
LDENDVSMDNVIQQPKRVKTDPELARSVNDMIAVILVYEDDGGYRIADPFKKLPTRRELP
EYYQIIATPMDFDRLKRKLSTGRYQTLEDVNTDMELLVNNAQIFNQEGSELYENSKIIGK
LWKEQYDKVNHNISAGPDSPQGSSKSDPMSSEWNREISSGPLTSAPPSMKMLKKELEEGQ
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgttacggtagctgtaaatttatcgatcggcgattttcctctttttcttcct
tatcaacaaatattattattgttacagaacccactaatcaacgtaaacaaagatagcttc
aaggtagatatgagcgctgctcaacctccaatactggccagcgtaatggcagatggtcaa
ccgagcagcgatactccaaaaccagatcaagctcttacgaagttagacaaagtcctttcc
gaaatgcaagatcgtggtctacagaatgatccgcgttatgcggaagttttgctactgaaa
caaaaacttcaacgaggaattcagaacaattcatccaatgtgggaagtagttcgtcagag
aaaaaagagttgagcacatcccagttatcccagctgaaatctcaagtcgttgcatatcgt
ctcctggctcgaaatgagaaggtccctgagaatttgatagctaatgctgtacaacttcct
ccaaagaagactacgatgttaccagaaccattcaaatatcctggcgaagcagaaaacggc
gaaaaattgccatatgatttgataaaggttctcagtctacatcaagcacggagcaagcgg
gaaacaacagtttctgctccacctggaattgatccgattgagatgctaatgcaacgagaa
aatatggtccataacaaaatagggcttcgtttgcaagtcctcaaaaattttcctgccgat
atgccggaacatataaaactgaaagccgaaatcgagttacgcgcaatacgtttgctcaat
ttgcaaacacaggtattcatgaagttgctctctgttcgaaaagacgtaatgtcttgtatg
caacgcgatactcttctggaaacatcgctgaacccccaagcttatcgacgcatgaaacgt
cagacccttcgcgaagctcgtatcaccgaaaaactggagaaacaactaaagttggagcaa
gagagaaataggagacagaagcataccgatttgatgtatgcaatcgttcaacactcaaga
gatttcaaggagtatcaccgaaatattctaatgaaaacagcaagaaccagaaaagctgtt
acaacataccatcaaaataacgagcgagagcgcaaaagagatgaaattcgcaatgaaaag
ctgcgaatgcaaaaactcatgcaagaagacgaagaaggttaccgtgcacttctcgatgaa
aagaaagatcagcgactggtgtacctacttcaacaaactgatgaatacgtcgactctctt
tgttccttggttcgccagcatcaaacgactgagaagaaaaagaaaagagaagacagacag
cgagatcaactcgatgaagaagtccatgttcatgtaagagaaagaagtaccggaaaaata
ctgacaggaactgatgctccaaaaccagaagaagttgaatattggcttgagacacaccca
gaatatgaaataattccacgagatcagctcagtgatgatgacggtgatgatgaggaagaa
gttgctgaagaagtaatcgaagaagaaaaagatgatcagtacgccggaatggacgacgag
acaaaagcaaagatgattatcgaaaaagctcgtaatgaagaagacgaatatgatcagaga
accaaaaagcagatggctgactattatgcgacggcacacagagtgaaggaaaaggtcgtc
aaacaacattctacgatgggtggcggtgatcctaatctcttgctgaaaccttatcagcta
aaagggttggagtggatggtctcgctgcacaacaacaatttaaatggaattcttgcagat
gaaatgggtctcggaaagacaattcaaacaatttctctaatcacctatttgatggaggta
aaacaaaacaaaggaccatatctcgttattgtcccactgtctactctttcaaactggcaa
tccgaatttgcgaagtgggctccgtctgtatcagcaattacttacaagggaaccaaagat
gctcgtcgtcttgcagaaggagcaatcaggaaaggcaacttcaatgtattgatgacaacc
tatgaatatgtaattcgagaaaaggcgctgcttggaaaaattagatggaagtatatgatt
atcgatgaaggtcatcgtctcaagaatcacaattgcaagttgacattgatgctcaatgga
tattttcacgctcaacatcgtttgcttctcaccggtactccgctccagaacaagctacca
gaactatgggcgcttctcaacttcctgctcccctccattttctcatcttgtggaacattc
gaacaatggttcaatgctccattcgccactacaggagaaaaagtggagttgagtcaagaa
gagactatgctcattatcaggaggcttcataaagttcttcgtccgtttttgttgagacgt
cttaaaaaagaagtagagtcacagctgccggataaaactgaatacgttatcaaatgtgat
atgtcggctcttcaaaaagtcatctatcgtcatatgaaacgtggatatctgcttgattcg
aaatcgtcatgtggagctcgttccttgatgaatacaatcattcaccttcggaaactttgc
aatcatcccttcctattccaaaatattgaggaatcgtgtcgaagccattggaatgtgaat
ttcgttagtggagtcaatttgattcgtgtggcaggaaaactggagcttctggatcgtatt
ttgccgaaacttaaagcaactggtcatcgtgtattgatgttcttccagatgacgacaatg
atgacaattttcgaagattatttgaatttccgacaatacacttatctccgtttagacggt
tcaacaaaaccagatgaacgtggagagttactcaaaatgttcaatgctccagacagcaaa
tacttcctcttcatgctttcaacaagagctggaggacttggtctcaacttgcaaacggca
gatactgttattattttcgactcggactggaatcctcatcaagatatgcaagctcaagat
cgtgctcatcgtatcggacagaaaaaagaggttcgagttcttcgactgattacggcaaat
tctgtcgaagagaagattttggccgctgcccgttacaagttgaatgtagacgagaaggtt
attcaagctggtaaattcgatcaacgttcaactggtgctgaacggaaacaaatgctagaa
gacatcattcgagccgatggagaagaggaagaagatgaagaagtgccggatgatgagact
gtgaatcaaatggttgctcgatctgaagacgagttcagcttattccaatccatggacatt
gatcgcagacgagaggaatctcttcagcagaatcgaaagccacgtctattggaagagatg
gagattccagatgatatcgtcaaattatccttcaactacgaagagatggaaaaagccagg
gaggaagggcgcgaagttgttgatcaaactcccaatcaacgaagacggcgtaaagagatt
gattacgcatccgatctgatgaccgaggagcagttcatgcgacaagtagaagaagtcgaa
gatgaaaacgaaagaatcgctttggagaagagaaagcagcgtaagaggaaaatggcagga
ctagatgagaatgacgtgtcaatggataatgttattcaacaacctaaaagagtgaagact
gatccagagttggcacgatcagtcaatgacatgattgctgtaattttggtttacgaggac
gatggtggttaccgtatcgcagatccgttcaaaaaactaccaactcgcagagagcttccg
gaatattatcaaattattgcaacaccaatggattttgataggctcaaaaggaaactgtct
accggtcgctatcagacactagaggacgttaacacagatatggaactactcgtgaataac
gctcaaatcttcaatcaggagggtagcgaactttatgaaaactcgaaaatcattggaaag
ttatggaaggagcaatatgataaggttaaccataatatcagcgcgggaccggacagccca
caaggctcatccaagagcgatccaatgagcagcgagtggaatagagaaatttcttctggg
ccgcttacgtccgcccctccatcaatgaaaatgctgaagaaggagttagaggaaggacaa
taa
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integrated database retrieval system