KEGG   Caenorhabditis briggsae (nematode): CBG_06106
Entry
CBG_06106         CDS       T01054                                 
Name
(RefSeq) Protein CBG06106
  KO
K12840  splicing factor 45
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CBG_06106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbr03041]
    CBG_06106
Spliceosome [BR:cbr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    CBG_06106
 Complex B
    CBG_06106
SSDB
Motif
Pfam: G-patch RRM_1 SWAP1_C
Other DBs
NCBI-GeneID: 8575359
NCBI-ProteinID: XP_045093067
WormBase: CBG06106
LinkDB
Position
IV:complement(8626816..8628076)
AA seq 349 aa
MYNDDEEDVPTGPPPAKQGKHYLRQKLIKSSAPPPVIDLSARNKPMTTAATPKTFQPIRA
NPVAENISFLPKAATDESVMIFGEEHIKCEYFPMTPNNFEILAKELNDRKQREKNAREIA
KRLQREHEEEDKKRSMGAAIAPPTMLMEPEPEVVKEKDDIPEDKPQSSFMPPPSFLPAFG
KSTSRGLGIAANIMKKHGYREGQGLGKSEQGMSTALQVERVGARTGNIVGESPRVPSFAA
NSTEAVNNATKILQLWNLTDVGEVSGEEGKKEFASEIKEEMEKCGQVVEVIVHVSENEED
ESRRVRVFVEFPTNAQAIKAFVMMNGRFFGGRSVGAGFQNVDDYNSRSF
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgtacaatgatgacgaagaagatgttccgacaggaccaccgccagctaaacaaggtaaa
cattatcttaggcagaagctcatcaaatcttctgctccaccaccagtaattgatctttct
gcaagaaataaaccgatgactactgctgcaacaccaaaaacgttccaaccaattcgagca
aacccagttgccgaaaatatcagtttcctcccaaaagcagcaacagacgagagtgttatg
atatttggagaagagcatatcaagtgtgaatactttccgatgactcctaacaactttgaa
atcttggcgaaagagttgaatgatcggaagcaacgcgagaagaatgcaagagaaatcgca
aaacggttacaacgggaacatgaagaagaggataaaaaacgatcgatgggagcagccatt
gctccacctacaatgcttatggagccggaacctgaagttgtcaaagagaaagatgatatt
ccagaagataaaccacaatcctcattcatgccacctccatctttccttcctgcatttggg
aaatcaaccagccgaggtctcggtatcgcagcgaatatcatgaagaagcatggatatcgg
gaaggacaaggactcggaaagtctgagcagggaatgagtacagctctgcaggttgaaaga
gttggagctcgaaccggtaacattgttggagaatctcctagagttccatcatttgctgcc
aactcaacggaagctgtgaacaatgctacgaaaatccttcaattatggaacctcaccgat
gtgggagaagtatctggagaagaaggaaagaaagagtttgcgagtgaaatcaaagaagaa
atggagaagtgtgggcaggttgtagaagtgatagtccatgttagtgaaaacgaggaagat
gaaagtcgtcgtgttcgtgttttcgttgaatttccaaccaatgctcaagccatcaaagcg
ttcgtcatgatgaatggaaggttttttggtggaagatcggttggcgctggattccagaac
gttgacgactacaatagtcggtctttctga

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