Caenorhabditis briggsae (nematode): CBG_06265 Help Entry CBG_06265         CDS       T01054                                  Name (RefSeq) Protein CBG06265   KO K20178   vacuolar protein sorting-associated protein 8 Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr04148   Efferocytosis Brite KEGG Orthology (KO) [BR:cbr00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     CBG_06265  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cbr04131]     CBG_06265 Membrane trafficking [BR:cbr04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     CBG_06265 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_VPS8 TPR_Vps8 Beta-prop_EML_2 Beta-prop_RSE1_2nd ANAPC4_WD40 Beta-prop_NUP159_NUP214 WD40_CDC20-Fz RMC1_N Beta-prop_HPS5 Beta-prop_THOC3 DUF6476 WD40_WDHD1_1st Tricorn_2nd WD40_Prp19 zf_RING_Vps8 Motif Other DBs NCBI-GeneID:  8575490 NCBI-ProteinID:  XP_045093025 WormBase:  CBG06265 LinkDB All DBs Position IV:complement(<9251895..>9256206) Genome browser AA seq 1275 aa AA seqDB search MSTFGSLEKEDWLDLGDINNAPTFSLDDALNDTENLSDPFLDEPFALDGEFGSSSNLAES STSLADIQPLSYKLDAAFVIQPHQLISHQILSNEKKTGRVIAVAERNGWIAVVTSKGQLL LFDLNGNLNQFHRGDESMGGASCVTFSLDGKFLAVGLQRGAIKIMTIDNKLYHMINEGGQ PGQGIVQVIYTKDNHTVLTLDNGGSFYECTISKPWLQKKKDKLRCHVSGCNGEIIAMKMM PADVIALLSVHRLIFYILKPRGQILGIFPTKFEFRYPPSCSYWLGSPKSEHEVNSPLDSL YSTTLKDFKVGISRGHKLAILRIHTNNFFTKNVRFDSIRKKKSLFNFQRRATVLRQFELP APIVNLHWMSTHVIVGIDAKGAVWQIDPEKGTSRKQDLDDLELVFSTPILKGSATGGKVS EAVKAVAEYACYQSVTSATSTSERLIVLAHDGLKYLEKVHEWEQLERYNERGDDISAALY LLDVCRDKVRASEEFRRESHNLLAEKASRLLTSAVGDVAGGSISDLVSHYRKYIRVILKV CVTGNLLDFLYTTCWDRLCMDSISKTVFLDHLDEYVLDGALVGPPAPLVNEYLQHLAAEG HFSQFQSAVVRFPIHTLDLHTVMSICQQNSIYDGIIYVNNKALNDYITPLESMLAEMNLF AHREMFSDSEQILGSKVLVYLNCCLSGMAYPFGQLDEENRKRVPLETFRCISSLKESNGG ETNEQYPYLRLLLHYDPQQFLNVVSTCADAELFQLDNRLQRFVDTIGQICVNMKCELSLI HFLALVVQLSERALIAPPVEYIQDSIITLLKISPWQQPGTESAILTGLFHATPEDKKRII RAAQNPMRPSILSFLYLSDRKFEELIKCYLDSENKEVYAAIGGILKEGELTTDESEEFRR YVISIMEILYRIDGWLSANLVNEHFRETVPSMARTVEEEKQLVFPVLAGIAQLRKQANYA SFCDDSELDEQLFGIVFEGICKEWPSWIPSSEDPENIDRQLMSLFPFWLPLASSTHLCLN IAVENGKCVRTVIRLFEARNHLEQSFNLLFEKLEKNKQNEEKMTEWLDETIKFCSRHSSK NETSDRMMRVFQFIVERATEVGENPEKQAKIDESLRTMCKQIVSTGAKYAVQLLDKLLDS PSFANSNFIDSSDLIIDVLSSCEYDADLLEEMIYIIREENLVLAQKLRLEVSSRAPLMHN PTCITCNQPINKSVYVFRCGHFQHIECSTNIEKVCTCNGFSNPLVVPREKPDKPRKRDIF KNWETKLNCRVFPKE NT seq 3828 nt NT seq  +upstreamnt  +downstreamnt atgagcacattcggctcattagaaaaagaagactggctcgatttgggagacataaacaat gctccaactttttccctggatgatgcactcaatgatactgaaaatctaagcgatcctttt ctggatgaaccttttgctctggatggagagttcggatcatcatcgaatttggctgagtcg tctacatctttagcagatatacaaccgttatcatacaagttagatgcagcctttgttata caacctcatcaattgatttctcatcaaatcctatcgaatgagaagaagacaggacgagtg atagcagttgcagagagaaatggatggattgcagttgtaaccagcaagggacaattactt ttgttcgatttaaatggaaatctgaatcaattccaccgaggagatgagtcgatgggggga gccagttgtgtcactttttcattggatggaaagttccttgcagttggattacagagaggt gcaattaagatcatgacaattgacaacaaattatatcacatgatcaatgaaggtggacag cctggacaaggaattgttcaagtgatttatacaaaagacaatcatactgtattaacactg gacaacggtggaagcttctatgaatgcacgataagcaaaccctggttacagaagaagaaa gataaattgagatgccacgtatcaggatgcaatggagagatcatcgctatgaaaatgatg cctgccgatgtgattgctcttctctcagttcatagacttatcttctatattctcaaacct agaggccaaattttgggaatattcccaaccaaatttgagtttcgataccctccttcttgt tcttattggttgggctctcctaaatcggaacacgaagtgaattcaccattggattctttg tattccactactctaaaagatttcaaagtgggcatcagccgaggacacaaactagctatt ctcagaattcatactaataacttctttacgaaaaatgtaagattcgattccattcgaaag aaaaagagcttattcaactttcagaggagagctacagtactccgacagtttgaattgcct gccccaatcgtaaatctccattggatgagtactcatgtgatagtaggaatagatgcaaaa ggagcggtttggcaaattgacccagaaaaaggaacatcgaggaaacaagatttagatgat ctcgagttggtattctcaacgcccattcttaaaggatctgcgactggtggaaaagttagc gaagcagttaaagctgtagcagaatacgcatgttatcaatcagtcacatctgctacatct acatctgaaaggcttatagtgcttgctcacgatgggctgaaatatctagagaaagttcat gaatgggagcagttggaaagatacaatgaacgaggtgatgacatttctgcagcactttat cttctggatgtatgcagggataaagttagagcaagcgaggaattcagaagagaatcgcac aatcttctcgcggaaaaagcaagccgtttgctcacttcagccgttggagatgttgctgga ggatcaatatcggatctggtatctcattatcgaaagtatatcagagtgattttgaaagtg tgtgtcactggaaatcttcttgattttttatacacaacatgctgggatcggctctgtatg gattcaatatctaaaactgttttccttgatcatcttgacgaatacgttttggatggggct ctggttggtccaccggctccacttgtcaacgaatatttgcaacatctggcagcagaagga cacttctcacagtttcagtcggcggttgtccgttttccaattcatacattggacttacat acagtgatgtcaatatgccaacaaaattcgatttacgatggaatcatatatgtgaataac aaagccctcaacgactacatcacaccacttgaaagtatgctggcggagatgaatctattt gcacatcgagaaatgttctcagatagcgaacagattcttggcagtaaagttttggtttat ttgaattgttgtctctctggaatggcatatccattcgggcagctggatgaagaaaatcga aagagagttccgttggaaacatttcggtgcattagttctctgaaagaaagtaacggaggt gaaaccaatgaacaatatccgtatcttcgattattacttcattatgatccacaacagttt ctcaatgtcgtgagcacttgtgctgacgctgaactatttcagctggacaacagactccaa agatttgtggatactataggccaaatttgtgtgaacatgaagtgcgaattgtcactgatc cactttctcgctctcgtggtgcaactctcggagcgagctttgatagctccgcccgtagaa tacattcaagattcgataataactttgctaaaaatatctccatggcagcaaccgggaaca gaaagtgccatattaactggattattccatgcaacacctgaagacaagaagagaataatc cgtgcagctcagaacccgatgcgaccttctattctcagttttctatatctatcagacaga aagtttgaagagctgataaaatgttatttggactctgaaaacaaagaagtttatgctgca attggaggaattttgaaagagggcgaattaacaaccgatgaatcagaagaattcagaaga tatgtaattagtataatggagatattgtatcgaattgatggatggttatctgctaatctt gtcaacgaacacttcagggaaacagtgccatcgatggcaaggacagttgaggaggaaaag caattagtttttccagttctggctggaattgcgcagttgagaaaacaggccaattatgcg tctttctgtgatgatagtgaattagatgaacagcttttcggaattgtttttgaaggtata tgcaaagaatggcccagctggataccgagctcagaagatccggagaacatagatcgtcaa ctgatgtcattgttccccttttggctgccactggcttcaagtactcatttgtgtttgaac attgctgtggagaatgggaaatgtgttcgtacagtaatacgactatttgaagccaggaat catttggagcaatcgttcaatctgcttttcgagaagcttgagaaaaacaagcagaatgaa gagaaaatgacggaatggctcgatgaaacaatcaaattctgctcgcgacattcatctaaa aacgaaacatcggatagaatgatgcgtgtatttcagttcatagttgagcgggcaacggaa gttggagaaaatccggaaaagcaagcgaaaattgacgaaagtctgagaacgatgtgcaag caaatcgtgtctaccggagcaaaatatgccgttcagctcctcgataaactgttggatagt ccgtcgtttgctaattctaactttatagacagtagtgatcttatcattgacgtactctca tcatgcgaatacgacgcggatttactagaagaaatgatatacatcataagagaagaaaat cttgtactggcccaaaaactacgactggaagttagtagtcgagcgccattaatgcataat ccgacttgcataacctgtaatcaaccaatcaacaaaagtgtatacgttttccgatgtggt catttccagcacatagaatgctccactaatattgaaaaagtttgcacatgcaacggtttc tccaatccactagtcgtacctcgagaaaagccagacaaaccaaggaaacgcgacattttc aaaaattgggaaacgaagctgaactgccgagtctttccaaaagaatga

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