Caenorhabditis briggsae (nematode): CBG_06335
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Entry
CBG_06335 CDS
T01054
Symbol
Cbr-icl-1
Name
(RefSeq) Protein CBR-ICL-1
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
K01638
malate synthase [EC:
2.3.3.9
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00620
Pyruvate metabolism
cbr00630
Glyoxylate and dicarboxylate metabolism
cbr00640
Propanoate metabolism
cbr01100
Metabolic pathways
cbr01200
Carbon metabolism
Module
cbr_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
CBG_06335 (Cbr-icl-1)
00630 Glyoxylate and dicarboxylate metabolism
CBG_06335 (Cbr-icl-1)
00640 Propanoate metabolism
CBG_06335 (Cbr-icl-1)
Enzymes [BR:
cbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
CBG_06335 (Cbr-icl-1)
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
CBG_06335 (Cbr-icl-1)
4.1.3.30 methylisocitrate lyase
CBG_06335 (Cbr-icl-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ICL
MS_TIM-barrel
MS_C
PEP_mutase
MS_N
HpcH_HpaI
DUF6986
Motif
Other DBs
NCBI-GeneID:
8589294
NCBI-ProteinID:
XP_045093189
WormBase:
CBG06335
LinkDB
All DBs
Position
V:6088724..6092330
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AA seq
975 aa
AA seq
DB search
MTTPAAGAAAKNFYQVVKSAPKGRFKGIKRDYTVEDVLKLRGSIDIDYTLATRGANKLWQ
LLHTEPFVPALGAQTGNQAVQMVRAGLKAIYLSGWQVAADANSAGDMYPDQSLYPANSGP
ELARRINRSLRRADQIEACEAEDYLAQRDWYAPIVADAEAGFGGALNCFELMKAYIEAGA
AGVHYEDQLGSEKKCGHMGGKVLIPTAQHIRHLNASRLAADVCGVPTIIVARTDAESSRL
LTSDIDPRDHPYIDYDAGRTIEGFYRLKDSTAIQYCVDRAIQYAPYCDLIWMETSHPTIA
DAREFAEGVHKQYPDKMFAYNCSPSFNWKKHLSPSQMEKFQKELGAMGFKYQFITLAGFH
ANSYSMFDLAKNYKETGMLAYSALQEGEFAAEKHGYTAVKHQREVGTGYFDAVSRAVTGG
LSSTTALSGSTEEAQFQTAVASASEDEEILSLTAQTVAGDEKILTPDALRFLHDLNTEFN
PRRLRLLSKRRQVQDDINSSLWFPDFNKETEVLRSDQGWKGAEIPRDLQDRRVEITGPTD
RKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDAVRKNISYVHPTTKKEYTLNE
KHAVLKVRPRGWHLPEKHVLIHNQPTSGSLFDFGLFVFHNAKALIAQGSGPYFYLPKLQS
AEEAQLWADVFKYTEEKLGLARGTIKCTVLIEHLLASFQLHEIIHALKDNIVGLNCGRWD
YIFSYIKTFQSHRKFLLPDRFQIGMTAPFMRNYSLEVIKACHQRGIHAMGGMAAQIPIKH
DPAANDKAFALVRADKEREVTDGHDGTWVAHPGLVPLAKGVFDQMMPKPNQINKLLSRSP
CSKEDLTVIPEGTRTEAGFRHNISVTLGYLDSWLRGTGCVPLYNLMEDAATAEISRAQLW
QWLHHDAKLEDGRTIDAGLVKQTIAAESERRLIRAGSVVNRIPEAAELLEKFVTEEKLSD
FLTTDAYDKLVSEGY
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccagcagccggagcagcagccaagaatttctatcaggtagtcaaatcggca
ccaaaaggccgtttcaagggaatcaagcgtgactacactgttgaagatgtgctcaaactt
cgtggatccatcgacatcgactacactcttgccactcgtggagctaacaaactctggcaa
cttctccatacagaaccatttgtgccagctctcggagcccaaaccggaaaccaagcagtt
caaatggttcgtgctggactgaaggctatttatttgtctggatggcaagtggccgctgac
gccaattccgccggagacatgtatccagatcagtcattatacccagcaaattccggtcca
gaactcgccagaagaatcaatagatcattgagaagagctgatcagatcgaggcctgcgaa
gctgaggactatttggcccaacgtgactggtacgctccgatcgtcgccgacgctgaagct
ggattcggaggagctctcaattgcttcgaattgatgaaggcctacatcgaagcaggagcc
gctggagttcactacgaagatcagttgggttctgagaagaaatgtggacacatgggagga
aaggttttgatcccgaccgcacaacatatccgtcacttgaacgcctcccgtttggctgct
gatgtctgtggagttcctaccatcattgtcgccagaaccgatgcagaatcttcgagactt
ttgacttcggatattgatccaagggatcatccatacattgattacgacgctggcagaacc
attgagggattctacagacttaaggattcaactgccatccaatactgcgtggaccgtgcc
attcaatatgctccatactgtgacctcatctggatggagacgtctcatccaacgattgct
gatgccagagagtttgctgaaggagttcacaagcaatatccagacaagatgttcgcttac
aactgctcaccatcgttcaactggaagaagcatctctcgccatcgcagatggagaaattc
cagaaggaattgggagcgatgggattcaaatatcagttcatcactcttgccggattccat
gccaacagttatagcatgttcgacttggcgaagaactacaaggagactggaatgttggct
tattcggctctccaggaaggagagtttgctgctgagaagcatggatacacggctgtcaag
catcaacgtgaagtcggaaccggctactttgacgccgtcagtcgcgcggttaccggagga
ctttcttcaactactgccttgtcgggatccaccgaggaggctcaattccaaactgccgtt
gcttcggcttccgaagatgaagaaattctttctctaaccgcccaaactgtcgccggagat
gagaagattcttactccagatgctcttcgattccttcacgacctcaacacagaattcaat
ccacgtcgtttgagacttctctcaaagcgtcgtcaagttcaagatgatatcaacagctct
ctctggttcccagacttcaataaggaaaccgaagtccttcgcagcgatcaaggatggaag
ggagcggaaattccacgtgacttgcaagacagaagagtcgaaatcactggaccaactgat
cgtaagatggtcatcaatgctatgaactctggagcaaacgtctttatggccgatttcgag
gattccaactctccaacatggagaaaccaattggaaggacaaatcaatttgtatgatgca
gtcaggaagaacatctcctatgttcatccaaccaccaagaaggagtacactttgaatgag
aagcacgctgtcttgaaggtccgtccacgtggatggcatcttccagaaaagcacgtcttg
atccataaccaaccaacctccggatccctcttcgatttcggactattcgtcttccataac
gcaaaggctctcatcgctcaaggctccggaccatacttctatcttccaaagcttcaaagt
gccgaggaagcgcaactctgggctgacgtcttcaagtacaccgaggagaaactgggattg
gctcgtggaaccatcaagtgtaccgttcttattgagcacttgcttgccagcttccaactt
catgagatcatccatgctctcaaggataacatcgttggactcaactgcggacgttgggat
tacattttctcctacatcaagaccttccaatcccatcgcaagttcttgttgccagacaga
ttccaaattggaatgactgctccattcatgagaaactactccttggaggtcatcaaggct
tgccatcaacgtggaatccatgctatgggaggaatggctgctcaaatcccaatcaaacac
gacccagctgctaacgacaaggcatttgctttggttagagctgacaaggaacgtgaagtc
actgatggacacgacggaacctgggttgcccatccaggattggtgccactggccaaggga
gttttcgatcagatgatgccaaaaccaaaccagatcaacaagctcctttctcggtctcca
tgctcaaaggaagatttgacagtgatcccagagggaactcgtactgaagctggcttccgt
cataatatctcagtcactcttggataccttgactcttggctccgtggaaccggatgtgtc
ccattgtacaacttgatggaggacgccgccaccgctgaaatctctcgtgctcaactctgg
caatggcttcatcacgacgccaaactcgaggacggacgcactatcgacgcaggacttgtc
aagcaaaccatcgccgctgaatccgaacgtcgtctgattcgtgctggatccgttgtcaac
cgaattccagaagctgccgaactcctcgagaagtttgtcactgaggagaaactcagcgat
ttcttgacaactgatgcctacgataaacttgtgtcggaaggttattag
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