KEGG   Caenorhabditis briggsae (nematode): CBG_06439
Entry
CBG_06439         CDS       T01054                                 
Symbol
Cbr-ttb-1
Name
(RefSeq) Protein CBR-TTB-1
  KO
K03124  transcription initiation factor TFIIB
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CBG_06439 (Cbr-ttb-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_06439 (Cbr-ttb-1)
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     CBG_06439 (Cbr-ttb-1)
 Prokaryotic type
  Archaeal type
    TFB
     CBG_06439 (Cbr-ttb-1)
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Cyclin_N Brucella_OMP2 BRF2-like_C_cyclin_rpt TFIIB_C_1
Other DBs
NCBI-GeneID: 8589377
NCBI-ProteinID: XP_002647378
WormBase: CBG06439
UniProt: A0AAE8ZYG1 A8X282
LinkDB
Position
V:complement(6480346..6482351)
AA seq 306 aa
MSAPVQCPVHPDVHLIEDHRAGDLVCPACGLVVGDRLVDVGTEWRSFSNERSGNDPSRVG
APENPLLTGGDLSTTIAVGFGGSDSDNSLANAQRKSMNNTDRQMTAAMSLIREMSERIHL
PRNIQDNASRIFKDVLDSRALRGKNNEAQAAACLYIACRKDGVPRTFKEICAVSRVSKKE
IGRCFKIIIRNLETNLEQITSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTP
ISIAAAAIYMASQASGEKRSAKEIGDVAGAAEITVRQTYKLLYPKAAELFPEDFRFVTPI
EALPNS
NT seq 921 nt   +upstreamnt  +downstreamnt
atgtcggccccagttcagtgtccagttcatccagatgttcatctcatcgaagatcaccgt
gctggcgacttggtctgcccggcttgtggtttagtcgttggtgatcgtttggtcgatgtc
ggtaccgagtggcgttcattctccaacgagcgaagcggaaacgatccgtctcgtgtcgga
gcaccagagaatccgctgctcaccggtggagatttgtccacgacgattgccgtcggattc
ggaggctccgacagcgacaacagtttggcaaacgctcagagaaagtcaatgaacaacaca
gacagacagatgacagcggcgatgagcttgattcgtgaaatgagcgagagaattcatttg
ccaagaaatattcaggacaacgcttcccgtatattcaaagacgttctcgacagtcgtgct
cttcgtggaaaaaacaacgaggctcaagcagccgcttgtctgtatatcgcttgccgaaaa
gacggagttcctcgtacattcaaagaaatttgtgcggtttctcgtgtctcgaagaaggaa
atcggtcggtgcttcaaaataatcataagaaatttggagacgaatctcgagcaaatcaca
tcagccgatttcatgtctcgtttctgtggaaacttgtatcttccgaactcgattcaagca
gccgccacgagaatcgccaaacgagctgttgatatggatttggtggctggacgcacaccc
atctccatcgctgccgctgcgatttacatggcatcacaggcgtctggcgagaaacgatca
gctaaagagattggtgacgtggcaggagccgccgagattactgttcgacagacgtacaag
cttttgtacccgaaggctgccgagctcttcccagaagacttccgctttgtcacaccgatt
gaagcactaccaaactcataa

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