KEGG   Caenorhabditis briggsae (nematode): CBG_06449
Entry
CBG_06449         CDS       T01054                                 
Name
(RefSeq) Protein CBG06449
  KO
K06874  zinc finger protein ZPR1
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbr03041]
    CBG_06449
Spliceosome [BR:cbr03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    CBG_06449
SSDB
Motif
Pfam: jr-ZPR1 Zn_ribbon_ZPR1 DUF7351 HypA zf-C2H2_7th_ZNF462 DnaJ_CXXCXGXG
Other DBs
NCBI-GeneID: 8589383
NCBI-ProteinID: XP_002647384
WormBase: CBG06449
UniProt: A8X288 A0AAE9CZI7
LinkDB
Position
V:complement(6530491..6532075)
AA seq 462 aa
MAADSQDIYRNLSADDYQAAPIVVESMCANCEENGETRIMCTSIPYYKAVILMSFECPHC
GYKNNEIQSGEAVQEHGTLVVLRVQKPEDLRRQLVKSEYASIEIPELELEIPHKSQPGEV
TTVEGVLERVHRGLSQDQEKRRLLDPEGAAQIDAYLARIQSCWDLKENWTLRLRDPTGNC
YIQNPDVRHVDPRCIISHYHRSLNEKKLLALADDNDQEEPVEEEPAPEFKSYDDAKQEVL
HFATDCPNCHGPTEVKMKPTDIPFFQTVIIMSLACDRCGYKSNEVKSGGAIRDQGCRLSV
QLREDVDLARDVLKTDTCALSIPEIDLEVGGNALCGRFTTIEGLLTATKEQLDAQSSFFM
GDSAESEEKSAVMTFLEKLDDIIALRLPATIILDDPTGCSYVQSLTAPMDDPRLTKEFYT
RTFEQNDDLGINDMKVENYGELEVLKEDEEGEEEAETTTVEA
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggctgctgactctcaagatatctacagaaatctgtcagcggatgactatcaagctgca
ccgattgtggtggagagcatgtgtgcgaattgtgaagagaatggcgaaactcgtatcatg
tgcacatcaattccctattacaaggccgtgattctaatgtcgttcgagtgcccacactgt
ggctacaaaaacaacgaaattcagagtggcgaagcggttcaggagcacggaacgctcgtc
gttcttcgtgtacagaagccagaagacttgagacgacaattggtgaaatccgagtacgcg
tcgattgagattcccgagctggagttggagatcccacacaagtcacagccaggagaggtg
acaacagtggaaggagttctagagcgtgtgcatcgtggtctaagtcaggaccaagagaaa
cgtcgtcttctggatccagaaggcgcggctcaaattgacgcctacttggcacgaattcag
agttgttgggatctaaaagagaattggacacttcgtctgagagatccgactggaaactgc
tatattcagaatccagatgtacggcacgtggatccacgatgcatcatttcacattatcac
cgatcgttgaatgagaagaagctgttggcactggctgatgataatgatcaagaagagcca
gttgaagaagaaccagcaccggagttcaaatcctacgacgatgcgaaacaagaagtgctc
catttcgccaccgattgtcccaattgtcacggtcccactgaagtcaaaatgaagccaaca
gatattccattcttccaaactgtcatcatcatgtcccttgcctgtgatcgatgtggttac
aaatccaacgaggtcaagtcaggaggagcgattcgagatcagggatgtcggttgtctgtt
cagttgcgagaagacgtggatttggctagagatgttctgaagactgacacgtgtgcactg
tcgattccggaaattgatttggaagttggtggaaacgcgttatgtggaagattcacgacg
attgaggggttactgacagctactaaggagcaattggatgcacagtcttcgtttttcatg
ggagattctgctgaatccgaagagaaaagtgcggtgatgacgttcctggagaagctagac
gacatcatcgctcttcgtcttcctgccacgattattctggacgatccaactggctgtagc
tatgtgcaaagcttgacagcgccaatggatgatccacgactgaccaaagagttctacacg
agaactttcgagcagaacgacgatttgggaatcaatgatatgaaggtggagaattatgga
gagttggaagtgttaaaggaggatgaagaaggggaagaggaggcggagacgacgacggta
gaagcatag

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