Caenorhabditis briggsae (nematode): CBG_06972
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Entry
CBG_06972 CDS
T01054
Symbol
Cbr-etr-1
Name
(RefSeq) Protein CBR-ETR-1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_06972 (Cbr-etr-1)
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CBG_06972 (Cbr-etr-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
8574116
NCBI-ProteinID:
XP_045093427
WormBase:
CBG06972
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All DBs
Position
II:16551597..16555549
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AA seq
643 aa
AA seq
DB search
MSGAVLPAAVHVHPKMDPAVPDIDGKDDVKDVPSTANNDASPSPSEPDSDAIKMFVGQIP
RQWNEVDCRRLFEQYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGALHNIKVID
GMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGLIEDCSVLRDNDGKSRG
CAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSLITGNGAGSPK
GGANLLHGLTPALLQQLSGGQNIQAVANLLSFINGPQGQQPQPQQNVLGLLGQVLSTLGK
IAEGDDVASKNGSSASTEKRVTSVMTSPHTSGATTAVAPLHLHQQQQKQQQLSQQQQGLG
AQLLANPVTAQSQFDAMAMAQAQIAHQNQLLALQGFAVQQSAPSQPQQGYHHHQNQYQYS
TGSPDSPSNATDSSDEPTRTSPNHRHQPYLNLPPPPLMGRPMWQQRQIHPQLFHTTYGLA
GGLAGAKTTSPVAATLANHQPIALTPFAGGNAALDHFTAMQQQYALLANLHANSGVQTAT
TSSGQLVGNGDVRGPDGANLFIYHLPQDFGDTDLINTFAPFGQILSAKVFIDKVTNLSKC
YGFVSYETPQSANNAIAAMNGFQIGSKRLKVQLKVDRGNPYNR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagcagtactgccagccgctgtccacgttcatccaaaaatggatccagcggtt
ccggatattgatggcaaggatgacgttaaagatgtcccatcgacagcgaacaatgatgcg
tcaccatctccatcggagcccgattctgatgccatcaagatgtttgtgggtcagattcct
cgccagtggaacgaagttgattgccgtcgtcttttcgagcagtacggttcggtttactcg
tgcaacatccttcgcgacaaatcgacacagaccagcaaaggctgctgcttcgtcacattc
ttccatcgcaaagacgccatagaagcgcagggagcactccataatatcaaagtgatcgac
ggaatgcatcatcctgttcaaatgaaaccagctgatactgagaatcgcaatgagaggaaa
ctctttatcggccaattgagtaagaagcacaacgaggagaaccttcgtgaaatattcgca
aaatttgggctaatcgaagattgcagtgttcttcgtgataatgatggcaagagcagagga
tgtgcatttgtaacgttcacgaatcgcagctgtgccgtcgtcgccaccaaagaaatgcat
cactcgcagacgatggagggttgctcagcaccactcgttgtcaaattcgcggatactcag
aaagataaagatgtcaagaccaagtcgttaatcactggaaacggtgctggatcaccgaaa
ggaggagctaacttgcttcatggcctgactccagcgcttttgcagcagctcagtggtggt
caaaacatacaagctgttgccaaccttctttctttcatcaatggaccacaaggacaacaa
ccacagccacaacagaatgttctcggacttttgggtcaagtgctttccactcttggtaaa
atagctgaaggcgatgacgtggctagtaaaaatggctcatcagcctctacggagaaaagg
gtaacgtcagttatgacgtcaccacatacttctggagctaccaccgctgttgcaccccta
catcttcatcagcaacagcaaaaacaacagcagttatctcaacaacaacaaggtttaggt
gctcaactccttgcgaatccagtcactgctcagagtcagtttgatgcgatggcaatggct
caggctcagattgctcatcagaatcaattgttagctcttcaaggattcgccgttcaacag
agcgcaccatcccaaccacaacaaggttaccatcaccatcaaaatcaatatcaatactct
actggatcgcctgactcgccaagcaacgccacagattcatctgatgaaccgactcgaact
tcgccgaatcataggcatcagccgtacttaaatttgccgccacctccactgatgggacgt
ccaatgtggcagcaacgtcagatacatccacagctgtttcacactacttatggtctggct
gggggtctcgctggggccaagactacttcgccagtagctgccacgttggccaatcatcaa
ccaattgccctcactccatttgctggtggaaacgctgctttggatcattttacagctatg
caacagcaatatgctctactcgcaaatctccatgccaactcaggagttcaaacagccacc
acttcatctggtcaactagttggcaatggagacgtcagaggtccagatggagctaatctc
ttcatataccacttaccacaagattttggagacactgacttgattaacacctttgcacca
ttcggacagattctctccgcaaaagtgttcattgataaagtaactaatctatcaaagtgt
tacggatttgtgtcatatgaaaccccacaatcggcaaacaatgctattgctgcgatgaac
ggattccaaatcggatcgaagcgtttgaaggtgcagctgaaggttgatcgtgggaatcca
tacaaccgttag
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