Caenorhabditis briggsae (nematode): CBG_07065
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Entry
CBG_07065 CDS
T01054
Symbol
Cbr-nol-1
Name
(RefSeq) Protein CBR-NOL-1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_07065 (Cbr-nol-1)
Enzymes [BR:
cbr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
CBG_07065 (Cbr-nol-1)
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CBG_07065 (Cbr-nol-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
8574197
NCBI-ProteinID:
XP_045093400
WormBase:
CBG07065
LinkDB
All DBs
Position
II:complement(16260255..16262432)
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AA seq
678 aa
AA seq
DB search
MAIQKKKKVAAAVAAPEEPKKAVKRPVEASAPTPKKKKKVVAKNGGDVSAKKKKVVKKVK
KVTEEEEDPVEKEVSKLQLLDDDDEEGLDRLDFTQQEGSDDDDLRDDYSDDDDDDLPIEK
KSAALDKKKEKILKEGEEELQLNIANQATFELPSVEEIENEMKSVPNLEIIKQRISDVIQ
VLGDFKNRRDPAKSRTQYVEVLKKDLCSQYGYNDYLMGKFMDLFPNGAELLEFLEANDNP
RPVTIRANSLKVKRRDLAKNLINRGMNVDPAAEWTKVGLVVYDSQVPVGATPEYLAGHYM
IQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNSGTLFANDASFDRCRAIIG
NLHRLGVNNAVVCNLGGEEFSKIKPNGFDRILLDAPCSGTGVIWKDQSVKTSKDSQDVQR
RHTVQRQLILSALDSLDANSPNGGYLVYSTCSVLVEENEAVVNFLLERRHCELVPTGLAI
GVDGYTRFRDYRFHPSLSMTKRYYPHVHNIDGFYVAKIKKLSNAKMSKQAVLEMEKEKAS
VKSQKKKQAAEEAENSEEESGDEEVAQNGNANGKAEAGKKKNKKKGGDDSDDDEDVETAP
MKNIGSGARANKKRRNQKKAAAKQAAVKEDDGFNTVGNVKRAKKPTQFKSKVPKRAAART
GAKSVKNRRKKMLAKQQA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctatccaaaagaagaagaaggtagcagcagccgtcgctgccccggaagagccgaag
aaagctgttaaaagacctgtggaagcttcagctccgactccaaagaagaaaaagaaggtg
gtagcgaagaatggcggtgacgtgtcagctaaaaagaagaaggtggtgaagaaagtgaag
aaagtgacagaagaagaggaagatccagtggagaaagaggtctcgaagcttcagttgcta
gatgatgatgatgaggaaggtcttgatcgattggatttcactcaacaagagggaagtgat
gacgacgatttgagagatgattattctgatgatgacgatgatgaccttccaattgaaaag
aagtcagctgctctcgacaagaagaaggagaagattttgaaggaaggagaagaggaactc
caactcaacatcgccaaccaagcaaccttcgaacttccttcggtggaggaaattgagaat
gagatgaaatctgtgccaaacttggaaatcatcaaacaacgtatctccgatgttatccaa
gttctcggagacttcaagaaccgccgtgatccagcgaaatcccgtacccagtatgtcgaa
gtgctgaagaaagacctgtgctctcaatacggctataacgactacctaatgggcaagttc
atggatttgttcccaaatggagcagagcttcttgagttcttagaggctaacgataaccca
agaccagtcaccattagagccaactctttgaaagtcaagcgtcgtgatctcgccaaaaac
ttgatcaatcgtggaatgaacgttgacccagctgccgaatggaccaaggtcggactcgtt
gtgtacgactcgcaagttccagttggagccactccggaatacctcgctggtcattacatg
atccaaggtctcaactctcttctcccagttatggcccttgcgccacaacctggagatcgt
gtgctggatatgtgttccgctccaggaggaaagacatcacatattgccgctttgatgaaa
aacagcggaactttgttcgctaatgacgctagttttgatcgttgccgtgctatcatcggt
aaccttcaccgtctcggagttaacaatgcagtggtgtgtaacttgggaggagaggagttc
tcgaagattaagccaaatggattcgaccgtattcttctcgacgcaccttgctctggaacc
ggagttatttggaaggatcagtctgtaaagacttctaaagattctcaggatgttcaaaga
cgtcacactgtgcaaagacaactgattctgtctgcattggactctttggatgccaactcc
cctaacggaggatacctagtctattccacttgctctgtgcttgttgaggagaacgaagcc
gtcgttaacttccttctcgaacgccgccactgcgaactcgtgccaaccggcctcgctatc
ggagtcgacggctacactcgtttccgtgactaccgcttccacccatcactctcaatgacc
aaacgctactatcctcatgttcacaacattgacggcttctatgttgctaaaatcaagaag
ctctctaacgcaaaaatgtcgaagcaggcagtgctggaaatggagaaggagaaggcgtcg
gtaaagtcgcagaaaaagaagcaagccgctgaggaagctgagaattccgaagaagagtca
ggagacgaggaggtggcacagaatggaaatgctaatggaaaagctgaagctggaaagaag
aagaataagaagaagggaggagacgattcggacgatgatgaagatgtagaaacagcgcca
atgaaaaacatcggatccggtgcccgtgcgaataagaaacgccgtaatcagaaaaaggct
gctgctaaacaagccgctgtgaaagaagacgatggattcaacacggttggaaatgtcaaa
cgcgccaagaaacccacacaattcaaatcaaaagtgccgaaacgtgccgccgcccgaact
ggagccaaatctgtcaagaatcgacgaaagaagatgttggcgaagcagcaggcatag
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