Caenorhabditis briggsae (nematode): CBG_07107
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Entry
CBG_07107 CDS
T01054
Symbol
Cbr-vig-1
Name
(RefSeq) Protein CBR-VIG-1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_07107 (Cbr-vig-1)
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CBG_07107 (Cbr-vig-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
DUF1633
Motif
Other DBs
NCBI-GeneID:
8574231
NCBI-ProteinID:
XP_002632234
WormBase:
CBG07107
UniProt:
A0AAE9IWK4
A8X3P1
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All DBs
Position
II:16029278..16030881
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AA seq
389 aa
AA seq
DB search
MTEYGCQVTNKFGLPSDDDSEYDDPRELMQKVSQLALKKKEEKAVKPAQPTKPVAAAPAS
AAAKTDGASAGRGRGGRGRGRGGAAGRPRDGGDRVSNENNGERSGDSRRGGPRRGGERGA
ARPAGRGGRGGFTRENREGEEPRDQHFADDGQDTRAPRRRGGFTLGGPSGGRGGSRGGRG
RQFDRQSGSDRTGVRAFEKKDGHGKGNWGDQKDELAGETENIAPEGETAPAEPEVPREKT
AEELAFEAEQEVLAKQKTLKEFRAAQNAEAPKFNTRKAGEGAADNFGKLIPMKKEVIPDR
EEDEVVVIHKAPRKQVLDISITFRNDRPERERNDRDHRRNDDRSERPQRGGQRGGRGGRG
GPRSGGQGGRHQATPFNASEDAFPALGAK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagtacggatgtcaagtcaccaacaagtttggtcttccatcggacgatgactcc
gaatatgacgatcctcgcgagctcatgcagaaggtctcccagctcgcactcaagaagaag
gaggagaaggctgtgaagcccgcccagccgaccaagccagtcgctgctgctccagctagt
gctgccgccaagaccgacggtgcttctgctggacgtggacgcggaggacgtggtcgcgga
cgcgggggagctgctggccgtccacgtgatggcggagatcgtgtctccaacgagaacaac
ggtgaacgctccggcgattcccgtcgtggaggaccccgcagaggcggtgaacgcggagct
gctcgtccagctggacgtggaggacgcggaggattcactcgcgagaacagagaaggagag
gagccaagagaccaacatttcgctgacgacggacaagacacccgcgctccaagacgtcgc
ggaggattcacccttggtggaccatccggcggacgtggaggatcccgtggaggtcgtgga
cgtcaattcgaccgtcaatccggatccgatcgtaccggagttcgcgctttcgagaagaag
gacggacatggaaagggcaactggggagaccagaaggatgagctcgccggagagaccgag
aacatcgctccagagggagagactgctccagctgagccagaggttccacgtgagaagacc
gccgaggagctcgctttcgaggctgagcaagaggttcttgccaagcagaagactcttaag
gagttcagagctgctcaaaacgctgaggctccaaagttcaacaccagaaaggctggagag
ggagctgctgacaacttcggcaagctcatcccaatgaagaaggaggtcatcccagaccgc
gaggaggacgaggtcgtcgttatccacaaggctccaagaaagcaagtgttggacatctcc
atcaccttccgcaacgatcgcccagaacgtgagcgcaacgatcgcgatcatcgtcgcaac
gacgaccgctcggagagaccacaacgcggtggacaaagaggaggacgcggaggccgtgga
ggaccacgttccggaggacaaggaggacgtcatcaagcaacaccattcaacgcttctgag
gacgccttcccagctctcggagccaagtaa
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