Caenorhabditis briggsae (nematode): CBG_07189
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Entry
CBG_07189 CDS
T01054
Name
(RefSeq) Protein CBG07189
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_07189
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
CBG_07189
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
8574289
NCBI-ProteinID:
XP_002632292
WormBase:
CBG07189
UniProt:
A0AAE9J8L3
A8X3I3
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All DBs
Position
II:complement(15709001..15710515)
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AA seq
244 aa
AA seq
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MAQRRPIPVTSRMDIQPYDLSQRPSYQTDEHVKRPINPFMLWCKSKRADMLKKNAGMKPS
EVSKQLGEGWRNMSEAEKKPFRDESARLKAEHVKNHPTYKYQPKRKPKRIKSEDLPPENA
SPQRHSSSRESSFSEPHDSPSIPQQQPQSSNIQSSNIPTFPSLYTGGLSSPVAPPPLTNP
MMPYGGLPFNFGYPSGPGAPQNMLSDPQNNGFNNLNLPNLINLNGPGNPGTGPQDSEGNL
PFFY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaagaagaccgattcctgtcacctctcgaatggacattcaaccgtatgatctc
tcacaaagacccagttatcaaacagatgagcatgtaaaacggcccatcaatccatttatg
ctttggtgtaaatcaaaaagagcggatatgctgaaaaagaatgccggaatgaagccatcg
gaagtcagtaaacagttaggagaaggatggaggaatatgtcggaagccgagaagaaacca
ttcagagatgagtcggcgagattgaaggctgaacatgttaagaaccacccaacctacaaa
taccaaccaaaacgaaagccaaaaagaataaaatcagaggatctaccacccgaaaatgcc
tccccccaacgtcactcgtcatccagagagtccagtttttcggaacctcacgattctccc
tcaattccccagcaacaaccacaatcttcaaatatccaatcttcaaatattccaacattt
ccatcactttacaccggcggtttgagctctcctgtggctccgccccctttgacaaatcca
atgatgccttatggtggacttccatttaattttggatatccatctggaccaggagcacct
caaaacatgcttagtgatccccaaaataatggttttaacaatttgaatctgccaaatttg
ataaatctgaatggacctggaaatccaggaactggaccacaagattcggaaggaaacctt
ccatttttctattga
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