Caenorhabditis briggsae (nematode): CBG_07340
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Entry
CBG_07340 CDS
T01054
Symbol
Cbr-alg-1
Name
(RefSeq) Protein CBR-ALG-1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
CBG_07340 (Cbr-alg-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_07340 (Cbr-alg-1)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_07340 (Cbr-alg-1)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CBG_07340 (Cbr-alg-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CBG_07340 (Cbr-alg-1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CBG_07340 (Cbr-alg-1)
microRNA pathway
RISC loading complex
CBG_07340 (Cbr-alg-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
8587686
NCBI-ProteinID:
XP_045093554
WormBase:
CBG07340
LinkDB
All DBs
Position
X:19790632..19796486
Genome browser
AA seq
1037 aa
AA seq
DB search
MAAELNNTNTDGPSGTAAAAKAPTVGSNDSMSGGPQYLPGVMSTTLRPTSPSNGSSSSSF
LGTSPTSTSQVVPTSGASTQPLNPSAAAASSALQNDLEEIFNSPPTAQTASTFGGDSPPQ
RQAGSLAPGPPLGSSGVSIGEPSSTIAGAMQAGGAGAVGGNQSGVQFQCPRRPNHGIEGR
SILLRANHFAVRIPGGTIQHYQVDVSPDKCPRRVNREIISCLISSFSKYFTNIRPVYDGK
RNMYTREPLPIGRERMDFDVTLPGDSAVERQFSVSLKWVGQVSLSTLEDAMEGRVRQVPF
EAVQAMDVILRHLPSLKYTPVGRSFFSPPVISASGVPGTAPPPQAAPSISSGSHSAGQYH
AESKLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRSMPVIEFIAEVLELPVQALAE
RRALSDAQRVKFTKEIRGLKIEITHCGQMRRKYRVCNVTRRPAQTQTFPLQLETGQTIEC
TVAKYFYDKYRLQLKYPHLPCLQVGQEQKHTYLPPEVCNIVPGQRCIKKLTDVQTSTMIK
ATARSAPEREREISNLVRKAEFSADPFAHEFGITINPAMTEVKGRVLSAPKLLYGGRTRA
TALPNQGVWDMRGKQFHTGIDVRVWAIACFAQQQHVKENDLRMFTNQLQRISNDAGMPII
GNPCFCKYAVGVEQVEPMFKYLKQNYSGIQLVVVVLPGKTPVYAEVKRVGDTVLGIATQC
VQAKNAIRTTPQTLSNLCLKMNVKLGGVNSILLPNVRPRIFNEPVIFFGCDITHPPAGDS
RKPSIAAVVGSMDAHPSRYAATVRVQQHRQEIISDLTYMVRELLVQFYRNTRFKPARIVV
YRDGVSEGQFFNVLQYELRAIREACMMLERGYQPGITFIAVQKRHHTRLFAVEKKDQVGK
AYNIPPGTTVDVGITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNNLTADELQQLTYQM
CHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDREHDSGEGSQPSGTSEDTTLSNMARAV
QVRLLVHPDANNVMYFA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaactgaacaacaccaacaccgatggtccctccggcaccgccgccgccgct
aaggcaccgaccgtcggctcaaacgactcaatgtccggcgggccgcaatatttgccaggg
gtaatgagtactacactccgaccaacgtcaccatccaatggatcctcgtcgtcgtcgttc
ctcggaacgtcgccaacgagcacctcgcaagtagtaccaacatctggagcatcaacgcag
ccgcttaacccgtcggcagcggctgcgtcatccgcgctccagaacgatttagaggaaata
ttcaactctcctcctactgcgcaaactgcgtcaacatttggaggcgacagtcctcctcaa
cgtcaagccggaagcttggctcctggaccacctctcggctcatccggagtctccatcgga
gaaccatcaagcacgattgccggagccatgcaagctggaggagctggtgctgttggcgga
aaccaaagtggagttcaattccaatgtccacggagaccaaaccatggaatcgaaggaaga
tccattcttcttcgggccaatcactttgctgtgagaatcccaggaggaaccatccaacac
taccaagttgatgtctctccggataagtgtccaagaagagtgaaccgtgagattatcagc
tgcttgatcagctcgttctccaagtatttcaccaatatccgtcctgtctacgatggaaaa
cggaacatgtacacccgagagccacttccaattggaagagagcgaatggactttgatgtc
actcttccaggagattctgctgtcgaacgtcaattctctgtttctttgaaatgggttggt
caggtttccctgtcaactttggaagatgctatggaaggacgagttcgtcaagttccattc
gaggctgttcaagctatggatgtgatccttcgtcacttgccaagcttgaagtacacccca
gttggccgctccttcttttctcccccagtcatcagtgcttccggagttccaggaactgct
ccaccaccacaagcagccccatccatctcatccggatcccattccgctggacaatatcat
gctgagagcaaactaggaggaggtcgcgaagtctggttcggattccatcaatctgtccgt
ccatctcaatggaagatgatgctcaacatcgatgtgtctgcaactgccttctaccgctct
atgccagtcatcgagttcatcgctgaagttttagagcttccagtccaagctcttgctgag
agacgtgctctttctgatgctcaacgtgtcaagttcaccaaggagattcgtggtctgaag
atcgagatcactcactgtggacaaatgcgcagaaagtaccgtgtctgcaatgtgactcga
cgtccagctcagactcaaaccttcccgcttcaactcgaaaccggacaaaccatcgagtgc
actgtggccaagtatttctacgacaaataccgtcttcaattgaaataccctcacttgcca
tgtcttcaagtcggacaggagcaaaaacacacctacttgccaccagaggtctgcaacatt
gttccaggacaacgttgcatcaagaagctcaccgatgtgcagacttccaccatgatcaag
gctacagcaagatctgccccagagcgtgagcgtgagatttccaacttggtccgcaaggcc
gagttctccgccgatccatttgctcatgagtttggaatcaccatcaatccagccatgact
gaagtcaagggacgtgttctctcggcaccaaagcttttgtacggaggacgcactcgtgcg
accgctcttcctaaccaaggagtctgggacatgcgtggaaaacaattccacactggaatc
gacgttcgtgtctgggcaatcgcctgcttcgctcaacaacaacatgtcaaggagaatgac
ttgcgcatgttcaccaaccaacttcaacgcatctctaacgatgctggtatgccaatcatc
ggcaatccatgcttctgcaagtatgccgtcggagttgagcaggtcgagccaatgttcaag
tacttgaagcagaactactctggaatccaattggttgttgttgtcctcccaggaaagact
ccagtttatgctgaggttaaacgtgttggagataccgtattgggaattgcaacccagtgc
gtgcaagccaagaacgccatccgtaccacaccacagaccttgtccaacttgtgcttgaag
atgaacgtcaagcttggtggagttaacagcattctccttccaaacgtgcgtccacgtatc
ttcaacgaaccggttatcttcttcggttgcgacatcactcatccaccagctggagactct
agaaaaccatctatcgccgctgtcgtaggatccatggatgcccatccaagtagatacgca
gcaactgttcgtgtccaacaacatcgccaggagatcatttcggatttgacctacatggtc
cgcgaacttctcgtccaattctaccgcaacactcgcttcaagccagctcgtatcgttgtc
taccgtgatggagtttcggaaggacagttcttcaacgttctccaatacgaacttcgtgcc
atccgcgaggcttgcatgatgctcgagagaggataccaaccaggaatcaccttcatcgct
gtccaaaagagacatcacactcgtctcttcgccgttgagaagaaggatcaggtcggaaaa
gcctacaacatcccgccaggaaccaccgtcgatgttggtatcactcacccaaccgagttt
gatttctacctctgctctcatgctggtatccaaggaacttcccgcccatctcactaccat
gttctctgggatgacaataacctgactgccgacgaacttcaacaactgacctaccaaatg
tgccacacctatgtcagatgcaccagatctgtgtcaatcccggcgccagcctactacgct
catttggtcgctttccgtgcccgttaccatcttgtcgaccgtgagcatgactctggggag
ggatcccaaccatctggaacctcagaagatacgaccttatccaacatggcccgtgctgtt
caagtaagattattagtacatccggacgccaacaatgtcatgtatttcgcttaa
DBGET
integrated database retrieval system
