Caenorhabditis briggsae (nematode): CBG_07572
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Entry
CBG_07572 CDS
T01054
Symbol
Cbr-sox-3
Name
(RefSeq) Protein CBR-SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_07572 (Cbr-sox-3)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
CBG_07572 (Cbr-sox-3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
8587838
NCBI-ProteinID:
XP_002645839
WormBase:
CBG07572
UniProt:
A0AAE8ZUR0
A8X4J1
LinkDB
All DBs
Position
X:18578612..18579356
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AA seq
213 aa
AA seq
DB search
MSDLSCLYPTLLCAAETAKTSYDEDTTSVSSGLSPPGSPLDSQNSLDHVKRPMNAFMVWS
RGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKPKSANLKQQPRLNISMPTLTPPTLFNNFTAFDSLKTHDLSQYYSSFFQSPVLSTSNY
APYNMMAAYARQAAAVAAATQVTASTTTTAPAT
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctttcctgtttatatcccacacttttatgtgctgctgaaactgccaaaacc
tcatatgacgaggataccacttctgtttcatccgggttgagcccaccaggatcaccgttg
gactcacaaaactcattggatcatgttaaacggccaatgaacgcttttatggtttggagt
cggggacagaggagaaaaatggcacaggataatccaaaaatgcacaactcggaaattagc
aaacggttgggtgcggagtggaaacaactctcagagcaggagaagcgaccttttatcgat
gaggctaaaagactcagagctttacatatgaaggagcaccccgactataaatatcgtcct
cgccggaagccaaaatccgctaatctgaaacaacaaccacgtctgaacatctcaatgcca
actctaacgccacccacacttttcaacaattttacggcttttgatagcttgaaaactcat
gacttgtcacaatactactcttcgtttttccaatctcctgtattatcgacttcgaattat
gctccatataatatgatggcagcttatgcgagacaagcggcggctgtagcggctgccact
caagttacagcttctacaacgactactgcaccagccacctga
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