Caenorhabditis briggsae (nematode): CBG_07888
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Entry
CBG_07888 CDS
T01054
Symbol
Cbr-spds-1
Name
(RefSeq) Protein CBR-SPDS-1
KO
K00797
spermidine synthase [EC:
2.5.1.16
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00270
Cysteine and methionine metabolism
cbr00330
Arginine and proline metabolism
cbr00480
Glutathione metabolism
cbr01100
Metabolic pathways
Module
cbr_M00034
Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
CBG_07888 (Cbr-spds-1)
00330 Arginine and proline metabolism
CBG_07888 (Cbr-spds-1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CBG_07888 (Cbr-spds-1)
Enzymes [BR:
cbr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.16 spermidine synthase
CBG_07888 (Cbr-spds-1)
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GFIT
Motif
Pfam:
Spermine_synth
Spermine_synt_N
Methyltransf_25
Methyltransf_12
MTS
BpsA_C
Motif
Other DBs
NCBI-GeneID:
8573911
NCBI-ProteinID:
XP_045093601
WormBase:
CBG07888
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All DBs
Position
II:14054870..14058668
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AA seq
320 aa
AA seq
DB search
MDKLHKGWFTEFSPDDLEKMSNPDAPEDSSSKLLKSDGQEMGGAWPGQAFSLQVKKVLFH
EKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPLFAHQNPKKVLIIGGG
DGGILREVLKHDTVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHEKLDLYCGDGFEFLKNH
KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAF
NRKIFPTVNYAQSIVSTYPSGSMGYLICAKSDTRDVTTPARVLSDEQVKNMNLRFYNSEV
HKAAFVLPQFVRNALEKKKE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggacaaactacacaagggatggttcactgagttctcgccagacgatttggaaaagatg
agcaatcctgatgctcccgaagactcctcttctaaacttctcaagtcggatgggcaggag
atgggcggtgcatggccaggccaagcgttttctcttcaggtcaagaaggtgttgttccat
gagaagagcaagtatcaggatgtgctcgtttttgagagcactacctatggaaacgtgcta
gttctagatggaatcgttcaagccaccgaacgagacgagttctcctaccaggaaatgttg
gctcatcttccactgtttgctcatcagaacccaaagaaagttctcatcattggtggagga
gatggaggtattctccgtgaggttctgaagcatgacaccgtcgaaaaagtgacaatgtgt
gagattgatgagatggtcattgatgtggccaaaaaattcctgcctggcatgtcttgcgga
ttctcccacgagaaactggatctctactgtggtgacggtttcgaattcttgaaaaatcac
aagaacgaattcgatgttattattactgacagttccgatccagtgggtccagccgagtcg
ctgttcggacagagttactatgagctcttgagagatgctcttaaggaggatggtattttg
tcatcgcaaggagaatccgtatggcttcatctcccactgattgctcatcttgtggcgttc
aaccggaaaatctttccaacagtgaactacgctcaatcgatcgtctctacttatccatca
ggaagcatgggatacttgatttgcgcaaagagtgatacccgtgacgtcaccactcctgct
cgtgtgctctctgatgaacaagtcaagaatatgaatctcagattctataattccgaagtt
cacaaagcggcgttcgtccttccacagttcgtcagaaacgctctggagaagaagaaagag
taa
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