Caenorhabditis briggsae (nematode): CBG_07904
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Entry
CBG_07904 CDS
T01054
Symbol
Cbr-tiar-2
Name
(RefSeq) Protein CBR-TIAR-2
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_07904 (Cbr-tiar-2)
03041 Spliceosome [BR:
cbr03041
]
CBG_07904 (Cbr-tiar-2)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CBG_07904 (Cbr-tiar-2)
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CBG_07904 (Cbr-tiar-2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_MUD2_C
RRM_ACIN1
RRM_10
RRM_PARP14_3
RRM_3
PHM7_cyt
RBD_RDR6
Nup35_RRM_2
RRM_MARF1
Calcipressin
Spp-24
Motif
Other DBs
NCBI-GeneID:
8573916
NCBI-ProteinID:
XP_002631916
WormBase:
CBG07904
UniProt:
A8X5D3
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All DBs
Position
II:complement(<14109772..>14112746)
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AA seq
411 aa
AA seq
DB search
MSNFYQNDDSSGYNPRVHARFAEREGYYLASGSEDPRTLFVGNLDPAITDEFLATLFNQI
GAVTKAKVCFDGMNDPFAFIEFGDHNQAGQALQAMNGRSLLDREMRVNWAVDASQPGDSR
KQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSEAKIIRDTATNKAKGYGFVSYPRRE
DAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGGERRDRGERGERRHYEKTFDEIYNQTS
ADNTSVYVGQINQLTEDEIRRAFDRFGPINEVRMFKVQGYAFVKFEQKEAAARAIVQMNN
AEIQGQQVRCSWGKSGESSASKSNEGGGNSRSSYGYGYGRGDGPSGGGSGGGSAPFPPFN
GPPPPPGGPPPAGGNSQYWQYYAQYYNNPQLMQQWNNYWQGGKQGPPPSGN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttctatcaaaacgacgatagttcgggctacaaccctcgggtccatgcgcgg
ttcgccgaacgggaaggctactatctcgcgtcgggctccgaggatccgagaacgctcttt
gtgggaaatctggacccggcgatcaccgacgagtttctggcgacactcttcaaccagatt
ggagctgtgaccaaggccaaagtgtgcttcgatggcatgaacgatccgttcgccttcatc
gaattcggcgatcataaccaggctggacaggcgcttcaggcaatgaacggtcgcagtctt
ttggatagggagatgcgtgtgaattgggcagtggacgccagccaaccaggcgactcccga
aagcaagagacctctcgtcacttccacgtcttcgtcggcgatctctcatcagaagtggac
tctacgaagcttcgtgaggcattcctagcctttggagacgtctccgaagctaaaattatc
agagatacggccacaaacaaggcaaaaggctatggattcgtttcgtatccgagaagagag
gatgccgagagagccatcgagcagatgaatggacaatggttgggtagacggaccatccgg
acaaattgggcgactcggaagccggaggaggaaggaggtggagagagaagagatcgtggg
gaacgaggagagcgcagacactatgagaagacgttcgatgagatctataatcagacgtca
gcggataacacctcggtctacgttggacagatcaatcagctcactgaagacgaaatccgc
cgcgcgttcgaccgcttcggaccaatcaacgaggttcgaatgttcaaagttcaaggctac
gcgttcgtgaaattcgagcaaaaagaggcggccgctcgagccatcgtccagatgaacaat
gcggagattcaagggcaacaagtcagatgtagttgggggaagagtggagagtccagcgct
agcaaatcgaacgaaggcggtggcaactctcgctcgagctatggatacggttacggtcgt
ggcgacggaccgtccggtggtggctcaggaggaggctctgccccttttccgccgttcaat
ggaccaccaccaccgccaggaggaccaccaccagctggaggcaacagccaatattggcaa
tactacgcccaatactataacaatccgcagctaatgcagcaatggaacaattattggcag
ggaggcaagcagggaccaccaccatctggaaattag
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