Caenorhabditis briggsae (nematode): CBG_07939
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Entry
CBG_07939 CDS
T01054
Name
(RefSeq) Protein CBG07939
KO
K07374
tubulin alpha
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04145
Phagosome
cbr04517
IgSF CAM signaling
cbr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
CBG_07939
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
CBG_07939
09142 Cell motility
04814 Motor proteins
CBG_07939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_07939
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_07939
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbr04812
]
CBG_07939
04147 Exosome [BR:
cbr04147
]
CBG_07939
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CBG_07939
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
CBG_07939
Cytoskeleton proteins [BR:
cbr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
CBG_07939
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CBG_07939
Exosomal proteins of other body fluids (saliva and urine)
CBG_07939
Exosomal proteins of colorectal cancer cells
CBG_07939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
8588147
NCBI-ProteinID:
XP_002646073
WormBase:
CBG07939
UniProt:
A0AAE9E846
A8X5E8
LinkDB
All DBs
Position
I:<13990387..>13991835
Genome browser
AA seq
448 aa
AA seq
DB search
MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGNGRYV
PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI
RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASL
RFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQM
VKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTV
VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR
EDLAALEKDYEEVGADSNEGGEEEGEEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaggtcatctccatccacgtcggacaagccggagtccaaatcggaaacgcgtgc
tgggagctctactgcctcgagcacggaatccagcccgatggaaccatgccaacccagtcc
accaacgagggcgagtccttcaccaccttcttctcagacaccggaaacggccgctacgtg
ccaagatccatcttcgtcgatctcgagccaactgtcgtcgatgagattcgcactggaacc
tacaagaagttgttccatccagagcagatgatcaccggaaaggaggacgccgccaacaac
tacgcccgtggacactacaccgtcggaaaggagctcatcgacaccgtcttggacagaatc
cgccgtttggctgacaactgcagtggactccaaggattcttcgtgttccactcgttcgga
ggaggaactggatccggattcacttcccttctcatggagcgtctttctgttgactacgga
aagaagtcgaagctcgagttctcgatctacccagctccacaggtctcaaccgccgttgtt
gagccatacaactccatcctcaccacacataccaccttggagcactccgactgcgcattc
atggttgataacgaggctatctacgatatctgccgcagaaacttggatgttgaacgcccg
agctacaccaacttgaatagaattatctcccaggtcgtctcctccatcaccgcctccctg
agatttgacggagccttgaacgtcgacctcaacgagttccagaccaacttggtgccatac
ccaagaattcacttcccactcgctgcctacactccactcatctctgccgagaaggcttac
cacgaggcgctttctgtcagcgacatcaccaacagctgcttcgagccagccaaccagatg
gtcaagtgcgatccacgccacggaaagtacatggccgtttgcttgttgtaccgtggagac
gttgtgccaaaggacgtcaacaccgccatcgccgccatcaagaccaagagaaccatccaa
ttcgtcgattggtgcccaaccggattcaaggtcggaatcaactaccagccaccaaccgtt
gtgccaggaggtgatcttgctaaggtgccacgcgccgtctgcatgctctccaacaccacc
gccatcgctgaggcctggtctcgtttggactacaagttcgacttgatgtacgccaagcgt
gccttcgttcactggtacgtcggagaaggaatggaggaaggagagttcaccgaggctcgt
gaggacttggccgctcttgagaaggactacgaggaggtcggagccgactctaacgaggga
ggagaggaagagggagaggagtactaa
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