Caenorhabditis briggsae (nematode): CBG_07952
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Entry
CBG_07952 CDS
T01054
Name
(RefSeq) Protein CBG07952
KO
K08064
nuclear transcription factor Y, alpha
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_07952
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
CBG_07952
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
MlaA
BTBD8_C
Motif
Other DBs
NCBI-GeneID:
8588140
NCBI-ProteinID:
XP_045093617
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Position
I:complement(14040431..14045121)
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AA seq
523 aa
AA seq
DB search
MRTPINVRNVDIVIRVRIVYDGIGRMRGISDAGAGPGPGTAEAQGRANALHSKPVKGFYD
HEKVRRMWLKEEEEGSMNAPSTSMPSAIPKKPDITTKAYIGPSKPILPRRNTQNGADLRA
PGPYTHRPYCLGPAKPRVGYPNRKPIPIREIPVQKVEPDLDWSILDRLNRSIRSPTADDL
NIPMHSRSPNPLTDDWNLLEAVASSEGPSEDATTSITLESSVERNCTSPTAEFPVYDFLE
GFDEFLNTKNLENSKISNVDLKNSQKSSPTNIAEALQNVFANTYQTSSFSRNLPQRYTQR
AAREKDRFPVNCNRVSPIDGSDDVAEDDGKPVPVNPRQFVRILRRREMRARQEDSGVIPV
ERQAYLYESRHQHALSRVRLSDGRFDPAARKNSGQPPTSEIVPTQPTLKRQYTPIRPAHS
DQDPLPKPSEMYRTKGPQVPRLPTASIRAPVPGPSIVAQLRPTGNTRAPIQTAPRGTANI
EIREESSEFLDSLNMLASEVTTTTLPESLESLLSGILEDFSQD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgcctataaatgtccgaaatgtggatattgttatcagagtccggatagtttac
gacggcattggaagaatgcggggaatatcggacgcgggcgccggtcccggtccggggaca
gcagaagctcaaggaagagcaaatgcgctccattcaaaaccagtaaaaggattctacgat
catgagaaagtgagaaggatgtggttgaaagaagaggaggagggatctatgaatgcaccg
tcgacgtcaatgccttcggcgattcccaaaaaaccagatattaccacaaaagcgtatata
ggaccttctaaaccgattttgccgcgaagaaatactcaaaatggagcagatttgcgagct
cccggaccttatactcacagaccctactgtcttgggcccgccaagccacgtgtcggctac
cctaaccgaaaaccaatacctattcgagaaataccggtccaaaaggtcgagcctgacctg
gattggtctattctggaccgcctaaacaggagcatacggtcgccgaccgccgacgatttg
aatattccgatgcattcccggtcgccgaacccgcttactgatgattggaatcttttagaa
gctgtggcgtcgtcagaggggccttcagaagatgccacaacgtctataacgctggaaagt
tcggtagagcgcaattgcaccagtccaactgccgaatttcccgtttacgattttcttgag
ggtttcgatgaatttctgaatacaaaaaacctggaaaattcgaaaatatcgaatgtggac
ctaaaaaattcccaaaaatcgagtccaacaaatattgctgaagccctgcagaatgttttc
gcaaatacctaccaaacatcatcattttcccgcaatttaccccagcgatacacacagaga
gccgcacgagagaaggacagatttccagtcaattgcaacagagtttctcctatcgatgga
tcggatgacgtggcagaggacgacggaaagccggttccagtgaatccacgtcagtttgtg
agaattctgagaagacgtgaaatgagagcacgtcaagaagattctggagtgatacccgtt
gaacgacaggcgtacttgtatgaatctagacatcaacacgcactgtcgagagtccgattg
tcggatgggcgattcgatccggcggcccggaaaaattctggccaaccaccgacttctgaa
atagtgccaactcagccgacgctcaaaagacagtatacgccgattcgccccgcccattcc
gatcaagatccgcttccgaaaccgtcggaaatgtacagaacaaaaggtccacaggttcca
cgactaccgacagccagtattcgcgctccagtacctggaccatcgattgttgcacaattg
cgaccaacaggaaatactcgagcaccaattcaaacagcgccacgtggaacagcgaacatt
gaaattcgagaagaatcgtcagaatttttggattcattgaatatgttggcatcagaagtc
acaacgactacgcttccagaatctttagaatccctgttatcgggaattctagaagatttt
tcacaagattga
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