Caenorhabditis briggsae (nematode): CBG_07964 Help Entry CBG_07964         CDS       T01054                                  Symbol Cbr-hmr-1 Name (RefSeq) Protein CBR-HMR-1   KO K27892   neural-cadherin Organism cbr  Caenorhabditis briggsae (nematode) Brite KEGG Orthology (KO) [BR:cbr00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:cbr04515]     CBG_07964 (Cbr-hmr-1) Cell adhesion molecules [BR:cbr04515]  Cadherins   Cadherin related    CBG_07964 (Cbr-hmr-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Ig_Shg Laminin_G_2 Laminin_G_1 EGF_Hmr-1 Hmr1_E-cad-like RET_CLD1 Cadherin_2 CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  8588104 NCBI-ProteinID:  XP_045093620 WormBase:  CBG07964 LinkDB All DBs Position I:14123645..14181556 Genome browser AA seq 3093 aa AA seqDB search MDFEKCEFELKILNFWGIFLDNIQTKFVFFQARTLINIPSTAPSGWLIGDLRFQNLIGNS ENATLQNSIFSSYFEVENGDKIITNSTISQLRGELFELFLNVQEQNFHRLVTLHIYVEPP NQIAHLKKFLSTVYRSTVYTSQPPGTTVVFSKPISLENQGNSSNFQIAPISKTPGQFLVK PRGKSMEILMMKTSLESEDVGKHVFYLAALSDNQMIAQTKIIVDIVDSGDVNFLLMSRKM IAKFATKIPENTTIYQVEKRNISEPLLFHLDQPSRFFEIDHFSGKVSTVLPVGYGIYHIR VVARNSKKQRSDAWLQIIVSGHLKNWEKSEIQKTSRSRRHLDDLIFRIPENSTMEEIERR KMKIPLFPGETIGEISVAKEWLKIDAEGKIRILKPLNFEKTSSIIATVPINGLQSSRTQT IRIHVEDVDEPPSFVNSPLPMLAVVPLNPTIGRIIYQFVARDENGDGDSNVQYKEIDFRI SAAGSFSVDSKSGVVRTGWSKYEKGETYRISIQAIDMTPSDNSTSQLSEVAILEILADER PPQFAKQEYEVAVSEDILVDYSVVDVKAQSFRSIEDGRSKGPITYSLESGDSSSSNEMKS FRIDPSTGIVHLTKELDYDDPALPKSHQFKVTAREDNRESHVALRIRIEDVNDNVPMFTR PLYTAQVREDIPLNQTILKGLLQLFQFWRKRAYHLFAGQSEFLNKRKWRDCAKIRLDADQ YNERHFVYRFNVTARDHGTNQLSNTAMVHIRTENTNDESAVFLPTSHYTAFVAEDAQGGT PVIQIQARDADRDEVTYSFMDKNQRSTQTMNLFTIDQHTGLVKLRHGVTPIDLAEAENPI NLTVIVEDDGSCCVYPSKTHASYATLLIGIEDVNNNKPEFPDCARYSEIAKIMEGTYKSD PPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRHTGVLTPSPHVVFDRETRPRE DVTVKATDRGDRPLIGFCQFSVEVVDVNDNAPQFERPSYETSVSRFEAIGTSVITVFAFD NDAAHNAEISYKLEVDTTAGEEHQNDIEFFELVNRRSGEITLIKPIPMRTQKFVFSVIAD DNGVPESLESTSQVILNVLDKQQKAPKWHSSPDCKPGITVAENVEMNKVILRCRATSSGD NKKSDVIYKLTASAGGHGNSKAESKFRQFNKFENGNEWVEVAIMEPLDYEQINNYTLTLT ATVGDMTSHVASTKTFIVEVMDVNDVVPQFTVDLFTGTIDEEMTPNEYLEKMNGKPIVTV KAIDTDSDGPQNEVHYRIVGEANGEETKHFRVDELTGEIFPNEKFDREKVDMYILKVEAS DRSISALPGANGPNKDNVKVQIVINDVNDNAPSFEESKYIGRVKESEGEGHDVITIKAHD LDKRDMLLGSQMRSIEHTKQLFQQKNSDSNLRYHLIGSGGGRIPFGVRTDSGTIFVKEPL DFESADQYHLILIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDVPKVLF NVRATDADQDEKSSRIVYRLEGQGAEEVFRIGKYSGMIELVKPLDRDPPTGVPSWNFVVQ AIDDDGMGLVGYADVQVNVRDINDNSPIFPERLFGFIEENREPIHSDGVYFMDVQARDFD DPTTENANIEYGIVRNKLIDGEPVFRIDQNTGKIFRSLDREMASEREFIIEVRANDRGVP SREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTY QLAEESDYFYVTTDKDSKQSAVGVLRVKQRNLYVSNDNYTRIAPAEEEKEEISHHHFITF PSALKTTSEHHSTTRIRHNVTASRCGFASPTDDTMLKRRATWHSSIATTTRHTFTEPQST ESEKTCREEQSSDSTRRATRMPVTWQGKGGLWVTLLGLVALMGCFIGHAEAFTDLSLPFG LEPSVAKSRFSSLVGGVRARDIHVFVMKNISEDTPVGTVLETFKAHDPSNPMYNFSFRIN RQSDPKRQFTIDQDGTLRVAHSLDREDIAVYNLIIEAYDNSNNIGRQMVAVYLQDVNDNG PEPYTVPRPCIFRENTPVNQLGTCEIRATDRDTAEFGPPFTMEVSPNFKYSQYLNVVFNP NGDGGNGSMTITPLQEFDREAPVPGKILEIPLVLADRAGRRNEASVHVIIGDLNDNTMHD GRMTIHVNSYLGRLKQTVIGRVYVDDADDWDLGDKTFSWKDSRPGFELSDKGDITMAAEM AAGTYTMSANVHDNARDEDAVGYVTVIVNAVPQIAFDNQGSVQLLIAEETPLQLPDDFIR ADSNGQSLMDTFKQEMVAYMGGDVTVDVFSVQVGIATLQTRDVPVLNVRFNARGNAYRDT AQLNGLIAAHRADLQRKLNVEIVGVGIDMCKFTQCDAGCQTLNSADYDGIVVSANSTVVV GVNATSRDDCTCPVWRAPPACQHSLCHNDGVCHNTNPGFFCECRNDGLKGSRCQGTTRSF GGNGFAWYKPMPACTSLNISFSFMTTQSDALLFYNGPLETQRNDTHIEYSDYIFIQLRGG RISLEVSMNGQSRSSLEVASTALNDGTWHEISVNQEGKRVELVVDNCRFLGAGADDSSCR AELYTPDDDERLNIVTPVQIGGLAPLSGQDYPQTIPRGGLNGCIRNLYVNGDQYDLATPA FEQNTEKGCRLWGSTCDSNSVDSLNHCIHGDCFADVQGSGAMVAKCVCDPGWGGPRCERR MEWIQFAQGAFIEYSPKIAFPEQVSDIELLFISGKVNGAPAELSFGTDSQQSYVSTSLES GQNGVTAAGKFDIGSGGKRARQELRVSEVLLKENASYWLQFTRNPTRASLSIDNAYTVST QLDKGEPFSLQVNQITLGTQGQNKGFQGCIGTYRWSKQNLPLKRGGALDENEESIVSIEN MAGVRDGCDLRITCADLPTNYCGGSFACVDFWKGPFCTCNDGANAILGDDGQVVGCGETL AVSKLGISSPAIILIMVSIGLLFLLLALMVVYTRRSPAAFENVQPGDMNRDNLRPYAVEG GGEADNDQYSIAGLRKPVMPLDTGMGGGMGGVPPLYPPRGMMSHPPKDDMELNSKIKDLE SDQNAAPYDELRIYDDERDNISVVTLESIESAQ NT seq 9282 nt NT seq  +upstreamnt  +downstreamnt atggattttgaaaagtgcgaatttgagctcaaaattctgaatttctggggaattttttta gacaatattcagacgaaatttgtctttttccaggctagaacactaattaacatcccatca acagcaccatctggatggctaattggagaccttcgatttcagaatttaattggaaattct gaaaatgccacgttgcaaaactcgattttcagctcgtattttgaagtggaaaatggagat aagatcatcaccaactctaccatctcccaactccgtggagagctatttgagctctttctc aacgtccaagagcaaaatttccaccgtctagtgacccttcacatctatgtggagccccca aaccagattgctcatcttaaaaagttcctctctaccgtataccggtctaccgtatacaca tctcaaccaccaggcactacagtagtcttttcgaaaccgatttcgctggaaaatcaagga aactcttcgaattttcaaattgcaccaatttcgaaaactccgggacagtttctggtgaaa ccacgtggcaaatccatggaaattctgatgatgaagacgtcgttggagtcagaagacgtt ggaaaacacgtcttctatttggcagcgttgtctgataatcaaatgattgctcagactaaa attatcgtggacattgtggattctggagacgtcaatttccttctgatgtccagaaagatg atagcaaagtttgcaacgaaaattccagaaaatacaacgatttatcaagtggaaaagaga aacatctccgaaccccttctcttccacctcgatcaaccgtctcgattcttcgaaatcgat cacttctctggaaaagtgtctacagtactccccgtcggttacggtatctaccatattcga gtagtagctaggaacagtaagaaacagcgctccgatgcatggctccaaatcatcgtcagt ggtcatttgaagaattgggaaaagtctgaaattcagaagacgtcaagatcccgacgtcat ctggatgacttgatttttaggattccagaaaattcgacaatggaagaaattgagaggagg aaaatgaaaattcctctattccccggtgaaacgataggagaaatcagtgttgccaaggaa tggctgaaaatcgatgcagaggggaaaattcgaattttgaagccgttgaatttcgaaaaa accagctccatcatcgctacagtacccattaatggtcttcagagcagtcgcacccaaacg attcgaatccacgtggaagacgtcgatgagccgccgagttttgtgaattctccacttccg atgctggcagttgtaccgttgaatccaacaatcggaagaatcatttatcaatttgtggcc cgggatgagaatggagacggagattcaaatgtacagtataaggagattgattttcgaatt tcagcagccggttccttctcagtggactcgaaatcaggcgtcgttcgaacgggatggagt aaatatgagaagggagaaacctaccgtatctcaattcaagccattgatatgacaccatct gataactccacgtcacagttatcagaagtggcgattttggaaattctggctgatgaacga cctccacaattcgcgaaacaagaatatgaagtagcggtttccgaggatattttggtggat tatagtgtcgtcgacgtcaaagctcaatcattccgatcaatcgaagacggacgatcaaaa ggacccataacatactcactggaatcaggagattcctcttcttcaaatgaaatgaaatcg tttcgaatcgatccatcaacaggaatcgttcatttgacgaaagaattggattacgacgat ccagcacttccaaagagtcatcaattcaaagtcaccgccagagaagacaatcgggagagc cacgtggcattgagaattcgaattgaagacgtcaacgataatgttccaatgttcacacgt cctctgtatacagcacaagttcgagaggatattcccttgaatcagactattttgaaaggt ttactacaactttttcaattctggagaaaacgcgcgtatcacctattcgctggacaatca gaatttctcaataaacgaaaatggagagattgtgcaaaaatccgtctggatgcagatcaa tacaacgagagacatttcgtttatcgattcaatgtgaccgcccgtgatcatggaacaaat cagctgagcaatacggcaatggtacacattcggacagagaataccaacgatgaaagtgcc gtattcctgccaacgagtcattacacagcgtttgtggccgaggatgctcaaggaggaaca cctgttatacagatacaggcccgtgacgcggaccgtgacgaagtcacctactcattcatg gacaagaatcagcgatcaactcaaacaatgaatctattcacaatcgatcaacacacagga ctggttaaattgaggcatggagtgactccaatagatttggcagaagctgaaaatcctata aatttgactgtaatcgtggaggacgatggatcttgctgtgtgtatccatccaaaactcat gcttcctatgcgacattgctcattgggattgaggatgtgaataataataaaccagagttt ccagactgcgcccgatactcagagattgcgaaaatcatggaaggaacctataaatcggac ccaccaacaatagtaaaagtggaagcaacagatgatgattcatcagcgaatggagatatc gtatattcattgtattacacacaatcggagagtcgaaaagcatttgtgatagatagacat acgggagtgttaacaccatccccgcatgttgtattcgatcgggagacacgaccacgagag gatgttaccgttaaggcaacagatcgaggtgatcgtccactgattggattttgtcaattc tcggttgaagtcgtcgacgtgaatgacaatgctccacaattcgaacgtccatcctatgag acttctgtctctagattcgaagcgattggaacatctgtgattactgtgtttgcgttcgat aacgatgcagcacacaatgcagagatttcctataaactggaagtggacacgacagcagga gaagagcatcaaaacgacattgaatttttcgaattggtcaatagaagatccggagaaatc actctaattaagccaatcccaatgcgaacccaaaaatttgtcttcagtgtgatcgccgat gataacggagttccagaatccctagaatccacgtcacaagtgattctgaatgtgctggat aaacaacaaaaagccccgaaatggcacagctccccagactgcaaaccggggattactgta gctgagaatgtggaaatgaataaagtgatactgaggtgtcgtgccacgtcatctggagac aataagaagagtgacgtcatctataaattgacggcttcagccggtggacatggaaattca aaggcggagtcaaaatttcggcaatttaacaagtttgaaaatggaaatgaatgggttgaa gtggcgataatggagccattggattatgagcagatcaataattatacactgacactaacg gctacggtaggtgacatgacatcacatgtagcttcaacgaagacatttatagtggaagtg atggatgtgaatgatgtcgttccccaatttacagtggatttgttcacagggaccattgac gaggaaatgacaccgaatgagtatttggagaaaatgaatggaaagccaatagtaaccgta aaagcgattgacacggattccgatggtccacagaatgaagtacactatcgaattgtcggt gaagcgaatggagaggaaaccaaacattttcgagttgatgaattgactggagaaatattc ccaaatgaaaagttcgatcgcgaaaaagtcgacatgtacattttgaaagttgaagctagc gatcgctcgatttccgcgttgcctggagcaaatggaccaaataaggataatgtaaaagtg caaatcgttatcaatgatgtgaatgacaatgcaccatcgtttgaggagtcgaaatatatc ggaagagtcaaagaatctgaaggcgaagggcatgacgtcatcacaatcaaggcgcacgac ttggataagcgagatatgctacttggaagccaaatgcgctctattgaacacaccaaacaa ttatttcaacaaaaaaattcagattccaacctccgctaccatctaatcggctcgggaggc ggtcgaatcccattcggtgttcgtacggattctggaacaatctttgtcaaggaaccattg gattttgaatccgcagatcaatatcatttaatcctgattgcctctgacgggagacacaac gcaacaacaaatgtctatatacatatagaagacgtcaatgataatgcaccacaattcgaa caacaaaaatatgcaactacagtaatcgaggaggatgtggatgtccccaaagtgttgttc aatgtccgggcgacagatgcggatcaggatgagaagagcagtcgaattgtgtatcgattg gagggtcagggagcggaggaagtgttcagaattgggaagtattctggaatgattgagctg gtgaagccgttggatagagatccgcccaccggcgtgcctagttggaattttgtggtccag gcgattgatgatgatggcatggggctggtggggtatgctgatgtacaggtcaacgtccgt gacatcaacgataattctccaatatttccggaacgtcttttcggattcattgaggagaat cgagaacccattcattccgacggcgtctatttcatggatgtgcaggctcgtgattttgat gatccgacgacggaaaatgcgaatattgaatatggaattgttaggaataaattgatcgat ggagagcctgtttttcgaatcgatcagaatacggggaagattttccgttccctggatcgt gaaatggcatcggagcgagaattcataattgaagtgcgagcgaacgatcgaggtgttcca tcacgagagggctttgcaaatgtcaccatcaaagtgactgatatgaatgataatgcgcca ttctttgagaagacacgctacgagggctccgtcgaggaaactgctccgattggagcagcc gtaatgagtttctcggcgttcgacgctgacgaagaagccaaagacaacgtgttcacatat caattggctgaggaatcggactatttttatgtgacaactgataaggattcaaagcaatca gcggttggggtgttgagagttaaacagcgaaatttatatgtttcaaacgataactatacg agaatcgcccccgctgaagaggagaaggaggagattagccatcatcattttatcactttt ccttccgcactcaaaacaacatcagaacaccactcgactacgaggatccgtcacaacgtg acggcttctcgctgcggattcgcgtctccgacggacgacacgatgctgaagcggcgtgcc acgtggcactcgtcgatcgcaacgaccacgcgccacacattcacggagccacagagcaca gaatcagagaagacgtgccgagaggaacagtcatcggacagtacacgacgagcgacaagg atgccggtgacgtggcaaggtaaaggggggctctgggtgacactattggggttggtggcg ctgatgggttgtttcattggtcatgcggaggcgtttacggacctttcgctgccattcgga cttgaaccatcggttgccaagtcgcggttctcatcgcttgtcggtggagtccgtgccagg gatatacatgtgtttgtgatgaaaaatatcagtgaggatacgccggtcggaacggttctt gagacttttaaggctcacgatccgagtaatccaatgtacaacttctcattccgcatcaac cgtcaatccgatccgaaacgtcagttcaccatcgatcaagatggaacccttcgtgttgct cattccctggatcgagaggatatcgcagtgtacaacttgattatagaggcttatgataat tccaacaacattggccgtcaaatggttgctgtctatcttcaagacgtgaatgacaacgga ccggagccctacacagtgccacgaccatgtattttccgcgaaaatactccagtcaatcag ttgggcacgtgcgagattcgagcaaccgacagagatacggctgaattcgggccaccattc acgatggaagtgtcgccaaacttcaagtacagtcaatacctgaacgtggtgttcaatccg aatggagacggtggaaatggatcaatgacaatcacaccgcttcaagaatttgatcgtgaa gcgccggtacctggaaagattctggaaatcccgctggttttggccgatcgagctggtaga aggaacgaggcgtcggttcatgtcattattggagacttgaatgacaacacaatgcacgat ggccgtatgacgattcatgtgaactcgtacctgggccgcctgaaacagactgtaattgga cgtgtctacgtggatgatgcagatgattgggatctgggagacaagacgttctcctggaaa gacagccgtcctggattcgagctctccgacaagggagacatcacaatggcagctgaaatg gccgccggaacgtacacgatgagtgcaaatgtacatgataacgccagagacgaggacgcc gtcggatacgtgactgtcattgtgaatgccgtcccacagattgcatttgataaccaagga agtgtccagttgctgatagccgaggagacaccacttcaactacccgacgattttattcga gccgattcgaatggacaatcgctgatggacacgttcaaacaggagatggtcgcgtatatg ggtggagatgtcactgttgacgtcttctccgtgcaggtcggaatcgccacccttcaaacc agagacgtcccagtcctcaatgtcagattcaatgcacgtggcaacgcctacagagacact gctcaactcaacggactcatcgcagcgcatcgtgcggatcttcagaggaaactcaacgtg gaaatcgttggcgtcggcatcgatatgtgtaaattcacccaatgcgacgccggatgtcaa acgctcaactctgccgactatgacggtatcgtagtgtcagccaattccactgtcgtcgtt ggtgtcaatgccacgtcacgcgacgattgcacttgtccggtgtggagggctccacccgct tgccagcactcgttgtgccataatgacggagtgtgtcataacacgaatcctggattcttc tgcgagtgtagaaatgatggattgaagggatccagatgccaaggaacgacgagaagcttt ggaggaaacggtttcgcctggtacaagccaatgcccgcttgcactagcttgaacatctct ttcagctttatgacaacacaatccgacgcgcttctcttctacaacggaccactggagact caacgcaacgacacccatatcgagtattccgactacatcttcattcagcttcgcggcggt cgaatttctttggaagtttcgatgaacggtcaatcgagaagctcactggaagtggcatcg acagcactgaacgatggcacgtggcacgagatctcagtgaatcaggagggaaaacgagtc gagttggttgtcgacaactgccgattcttaggcgccggagccgatgattctagttgtcgt gccgaattgtacactccagatgacgacgaacgtctgaatattgtgacacctgtgcagatt ggaggactggcaccgctttccggacaagactatccacaaacgattccacgtggcggtttg aatggatgcattcggaatttgtacgttaatggagatcagtatgatttggcgaccccggca ttcgagcagaataccgagaagggatgtaggttgtggggatccacgtgtgactcgaattca gtcgactcgctgaatcattgtatccatggagactgctttgcggatgttcaaggatctggt gccatggttgccaaatgcgtgtgtgatccaggatggggtggaccacgatgtgaacgacga atggaatggattcaattcgcgcaaggagccttcatcgagtactcccccaaaatcgccttc ccagaacaggtgtcagatattgaactgctgtttatctcgggaaaagtcaacggcgcgcca gctgagctctcatttggcacggattctcaacagagctacgtgtcgacaagcttggaatca ggacagaatggggtcactgctgctggaaagtttgatattggaagtggaggaaaacgggca cgacaagagctccgagtatctgaagtgttgctgaaggagaatgcgtcgtattggctgcaa ttcaccagaaatccgactcgggcgagtttatcgattgataacgcgtatacggtatccaca caactggacaagggagagccattctcgcttcaagtcaatcagatcacactcggaacgcag ggtcagaataagggattccagggttgcatcggaacgtatcgttggtcgaaacagaatctc ccactgaaacgtggcggtgctctggacgaaaacgaagaatcgattgtatcgattgagaat atggcgggcgttcgagatggttgtgatctacgcatcacgtgtgccgatctaccaaccaac tactgcggcggatccttcgcatgcgtcgacttctggaaaggaccattctgtacgtgtaac gacggtgccaacgcgattctgggtgacgatggacaagttgtcggatgtggagagacgttg gcggtgtcgaaattgggcatcagctcaccggctatcatccttatcatggtttccattgga ctgttgttcttactccttgccttgatggttgtctacacaagacgatcgcctgcagcattt gaaaacgttcaacccggagacatgaatcgcgacaatttgagaccgtatgctgtcgaagga ggaggcgaggccgataatgatcagtactcaatcgccggactgcgtaaaccagtgatgccg ctggacactggaatgggcggtggaatgggcggagttccgccattgtatccgccacgtggc atgatgagtcatccaccgaaagacgatatggagctgaattcgaagatcaaggacctggaa tcggatcaaaacgcggcgccatacgatgagctgagaatttatgacgatgagcgggacaat atctcagtggtcactttggaaagtatcgaaagtgcacagtaa

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