Caenorhabditis briggsae (nematode): CBG_08113
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Entry
CBG_08113 CDS
T01054
Symbol
Cbr-attf-5
Name
(RefSeq) Protein CBR-ATTF-5
Organism
cbr
Caenorhabditis briggsae (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DsrD
Motif
Other DBs
NCBI-GeneID:
8585240
NCBI-ProteinID:
XP_045093674
LinkDB
All DBs
Position
X:complement(304322..311256)
Genome browser
AA seq
1920 aa
AA seq
DB search
MPNTSYNQFGTGRSLSTSHNPLVQHGINGADMLLNRSDEPPESQNGCARVTPILSQRFGL
HFNRRFTMPHGAPYPLRPSPERRPSGVSECFSGLEVPQKPPRPYKPYIPRKSRKQFQFPK
IVATVPPPLPTPPPPPPPQSVPPQPQPTTSEQTVPLTSEGSSNCSTAPPAARNQQVLTGN
EERVDTALAAKTMDIDEFKKKFPHGTSVRDILTSGWYKDQATGKYYMENEPPPRNVSLTI
TTFSCSVFLQEEQLEDTTTSTSDRSPQESGSSEANQEQQVMPVVNSKSNWRVSFMGQSTR
GRPVTRGRGNSHLPHQIHYMPSQSHSIPRNAQQQHLLPVKVKRELIEVLTLNNFKIQQEP
VYHPSHRNHPHNLMPPVSHAMAMSMQNHLMHVPGQGMVQFPLLHAQQMQQHLQQQLQHQM
QHHLQLQIQRQKISQQQFMQRQQLPQSPQMKPNLTNMQQSYDHTQHMPQQQGSPQQSPNN
LLQTPAISGTTTDSRSQSLPPPSKQSANAAAQPEVTRLGEKTQLDSAGRKPITPTKPNIL
RKNQSSDDTTTQLPSCDTPSIEISPATALPISSNQISVLIPAENMRQVAVQEVVSGPSEA
PPRKRERKQVFEPDGPYQLSQLYSLIQEETQTADTIGSTIETVANPSFQFFPGVESFDHK
IRQMITKAPRMEPTKNLAIDSGRVSEVEKMQVSNISSVKLPNIESVTSGVKSELLNFNQL
AMNIKQEILDTENPSPPKKVRGRPRKNQVPAQVQVPVSLQDQVQEALLLLQQQLMFPTEQ
SPQLPPPSPPAPPKPKQHRKPSTPKQPKDTSSKPGAKKKSKTSKQQEESSTFPEIKQEEE
DEETSEKERLALLQALPTNLLNAIEAQKVVDAQEQERDKEKESYKEKSKKTPRKYTKRAN
KPSNLFEEADFAGNRVFLQSMAHMDASGLFSGVNPHTGEQIHPTSETIAGMLPISILSHH
EDPPIKEIDDELPPPPIATAVATSGTPLTLNIYEYPPKFVAAPVWTDDTGPLVPIFMYQN
DKKIERQNNHTDDEENEAANIDQVNRDETQEEVPYVPKVITKAALKFVPPIAKKRGPRKL
KVVFAETPFEPPAPWKPMENALRRVAPKLPRKLLKNSVHIIPKTIDFCQPIAKVKLAKKR
SSEKTRKWLKMNQGVQIVQLLKYFKKHLITFDKMLFDEKEAPSLLKIMMETIIEEEKNIY
SEKINDVLDEVVDDCCDACFEESTGRVTSHSTNVLNFRVDRTGLDSTSRWKAWNTKVTQR
INQQTKSEMVDSRLTTIDTYSGLFSNKIRKILHPKLRKEAIQICRDIMKLRSRLEIGSGS
RPRKGTTLEPKTICHLKLNALEMRSATYVARKNEHRNCQLAEMITTWEKAAKKFDTSKTV
QEKVDAHEIIAKCTKSLTCSLDLHDAYIDVCMFVARLQVLYYHACQLHENFDKETKELKE
VYLSIEDTEHLLILSEAKVKLLSECRKQSRIDLITTYIEGDAMNVEKDRLKRLQESDADA
ESIAMSEEKLKAKKAQFVRSCEDIGLEKVMKQYLKATSKEKSKEKLKIEDAKSMPIRKNV
FHLCNDGGYVYSREIAPKFLSNECRALSLMQMAITHSLPTNIVDEKFRSFADAEKREAKK
IVISMVQQCRMELYSFDQRRQCLNMEASQLKYERLKEDQETDFGQTDQQMMRSIREKVFQ
LGEAVKENQLAVFNPSTHDQEELDLKVQESIKAFQKKKREQAFKRRYLADYLSDTTLGWE
THDVNKQKIMRIEQYRKRRDDIEQSQEIVCGHMETQMKKNPANPFYAEYEKLCTEEVTSF
ETETDDIGPLVNSIKELSSHIRMAETEEIRKKYQELLDMQKTTYQALQQKKRADRRDMLR
NNEKNAKRWSQIDLNFREILNELEFYSGHEIDQLEKNDVSILDTTFITQNHSGKSYFQKR
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacacctcctacaatcagttcggtacaggcagaagtttgagtacatcacacaat
cctctagtgcaacatggtatcaacggtgctgacatgttactaaaccgatcggacgagcct
ccagaatctcaaaacggttgtgctcgagtaacgccaatactttctcaaagatttggatta
cattttaatcgaaggttcaccatgccgcacggagctccttatccgcttcgcccttctcca
gagcgtcgtccatctggagtttcagaatgtttcagtggtttagaagttccacaaaaacct
ccgcgcccatataaaccgtacatccctcgtaagagccgcaagcaatttcagtttccaaaa
attgttgcaacagtaccgccgcctttgccgacaccacctccgccacctccaccgcaatca
gtaccgccgcaaccgcaaccaaccacatcagaacagacagttccgctcacatcagaaggt
tcttcaaactgttcaacagcgccaccggctgcccgaaatcagcaagtactcaccgggaat
gaagaaagagtggatacggcacttgcagcgaaaacgatggatatcgacgagtttaagaaa
aagtttcctcacggtacctccgttcgtgatattctgacttcgggatggtacaaggatcag
gcaactggaaaatattatatggaaaacgaaccacctcctcgcaatgtgagtttgacaatc
acaacgttctcatgttcagtttttttacaggaagaacaattagaagacacaacaacatca
acttctgatcgatctccacaagaatcaggatcgagtgaagcaaaccaagaacagcaagtg
atgccagtagttaattcgaaaagtaattggagagtgagttttatggggcaatccacaaga
ggaagaccagtaacaagaggcagaggcaattcacacttacctcaccagattcactacatg
ccatcacagagtcactccattccgagaaatgcccaacagcagcatttgctacctgtcaag
gtaaaacgcgagctaattgaagtcctcacattaaataatttcaagattcaacaagagcct
gtctatcatccatcacatagaaatcatccacacaatttaatgccacctgtttctcacgcg
atggcgatgagcatgcaaaatcatctcatgcatgttccagggcagggtatggttcaattt
ccattgttgcacgctcaacaaatgcagcaacatttgcaacagcaattgcaacaccaaatg
cagcaccacttgcaactacaaatacaacgacaaaaaatttctcaacaacaattcatgcaa
cgtcagcaacttccacagtctccacaaatgaaaccgaacctgacaaatatgcaacaatct
tatgatcacactcagcacatgccacagcagcaaggttccccacaacaatcaccgaataat
ctactgcaaactccagctatttctggaacaactaccgattcacgatctcaatcacttcct
cctccttcaaaacaatcagccaacgccgctgctcaaccggaggttactcgattgggggag
aaaacacaactcgactctgcaggaagaaaaccaattacaccaacaaagccgaatattctt
cggaaaaatcaaagttctgatgacaccacgacacagttacctagttgcgatacaccttcc
attgaaatttctccggctacagcgttaccgattagttccaatcaaatttcagtccttatc
ccagcagaaaatatgcggcaagtagctgtgcaagaagtggtgagtggaccttccgaagcg
ccgcctcgcaaacgagaaaggaagcaagtgtttgagccggacggtccctaccaattatct
caactctattctctcattcaggaggaaacccaaactgcagacaccattggctccacaatt
gaaacagttgccaacccgtcgttccaattcttccccggtgtagaatcttttgatcataaa
attagacaaatgatcacgaaagctcctaggatggagcctacaaaaaatcttgcaatagat
tccgggagggtttctgaagttgagaaaatgcaagtttccaacatctcatctgtgaagctt
cccaacattgagtccgtaacctcaggggtcaaatcagaactgctcaatttcaatcaactt
gcgatgaatattaagcaagaaattcttgatactgaaaacccttcaccacccaaaaaagtc
agaggaaggcctcgcaaaaatcaagttccagctcaagttcaagttccagtatcccttcaa
gatcaagttcaggaagcattattgttgctacaacagcaattaatgttcccaacagagcaa
tcgccgcagcttccaccgccgtcgccaccggctccgccaaaaccaaaacagcacagaaaa
ccgtcaactcccaaacaaccaaaagatacaagttcgaagccaggagcaaaaaaaaaatca
aaaacttcgaaacagcaagaagaatcgagcacatttccagagataaaacaagaagaagag
gacgaggaaacttccgaaaaagaacgtttggctttactccaagctctaccgacaaatctg
ctaaacgcaattgaagctcaaaaagtggtggatgcacaagagcaagaaagagataaagag
aaagaaagttataaagagaaatcaaaaaaaacaccgaggaaatataccaaaagagcaaat
aaaccatcgaacttgttcgaagaagctgactttgctggtaaccgggtgttccttcaatca
atggcacacatggatgctagtgggctattttctggagtcaatcctcacaccggcgagcaa
attcatccaactagtgagactattgcgggaatgttacctatttcgattttatctcatcat
gaggacccaccgataaaggaaattgacgacgagttacctcctccaccaattgctactgca
gttgcaacatcaggaacaccgctgaccttgaacatctatgagtacccaccgaaatttgtt
gctgctccagtttggactgatgatacgggaccgttagtacctattttcatgtatcaaaat
gacaaaaagattgaacgacaaaataatcataccgatgatgaggagaatgaagccgcaaac
attgaccaagttaatagagatgagacacaagaagaggtcccatacgtcccgaaagtcatc
accaaagccgctctcaaatttgtgccaccaattgccaaaaaacgaggtccacgaaaacta
aaggttgtgttcgcggaaacgccatttgaaccacctgccccttggaagccaatggaaaat
gctttgcggagagttgccccaaaattgcctcggaaactgctcaaaaacagcgttcatatt
attccgaaaacaattgatttttgtcagccgattgcaaaagtaaaattggccaagaaacgc
agttctgaaaaaacaaggaaatggctgaaaatgaaccaaggtgtacaaattgttcaactc
ttgaagtatttcaagaaacatttaatcacgtttgacaagatgttatttgatgaaaaggaa
gctccaagtttgctgaaaattatgatggagacaattatcgaagaagaaaaaaacatttac
tcggaaaaaataaacgatgtgctcgatgaagtggttgatgattgttgtgacgcttgtttt
gaagagagcacgggacgcgttacttctcattccacaaatgtgctaaacttccgtgttgat
cgaactggtttagatagtacctcacgatggaaagcgtggaatacaaaggttacgcagaga
ataaaccagcaaaccaagtctgaaatggttgacagtaggctcacaacgattgacacttac
tcaggattgttctccaataaaattcgaaagattcttcatccgaaattgagaaaagaggca
attcaaatttgtcgtgacattatgaaactacgatcgcgattggagattggcagtggttct
cgtccaagaaagggtacaactttggagccaaaaacaatatgtcacctgaaattaaatgca
ctggaaatgcgctcagcaacttatgtagcgaggaaaaatgaacataggaattgtcaatta
gcagaaatgatcacaacatgggaaaaagctgcgaaaaagttcgacaccagcaaaaccgtc
caagagaaagttgatgcccatgaaataatcgcgaaatgcacaaaatcgctgacttgttct
ctcgatcttcatgatgcctatatcgatgtttgcatgtttgttgcaaggctgcaagttctc
tattaccacgcttgtcagttgcacgagaattttgacaaggaaacaaaagaactgaaagaa
gtttatctgtcgatagaggatacggaacatttgttgatcttaagtgaagccaaggtgaaa
ctgttgagcgaatgtcgtaaacaatcgagaatcgacttgatcactacctatatagaagga
gatgccatgaacgtggaaaaagacagactcaaacgattacaagaatctgatgcagatgct
gaatctattgctatgtctgaagagaaactgaaagctaaaaaggctcaatttgttagaagc
tgcgaagatattggcttagaaaaagttatgaaacaatatttgaaagcaacatctaaggaa
aaatccaaagaaaagttgaaaattgaggatgcgaaatcaatgccgataaggaagaatgta
tttcacttgtgcaatgatggtggttatgtgtactcacgcgagattgcaccgaagtttttg
tctaatgaatgccgtgctctatccctcatgcaaatggccatcactcattctttgccaacc
aacattgtggatgaaaaattccgaagttttgcggatgctgaaaaacgtgaagctaaaaaa
attgtgatatcaatggttcaacaatgtcgtatggaactttacagttttgatcagagacgc
caatgtcttaatatggaagcttcccaattaaaatatgagaggctcaaggaagatcaggaa
acggactttggacaaactgaccagcaaatgatgcgatcgattcgagaaaaagtgttccag
cttggagaagctgtgaaagaaaatcaattggctgtattcaacccatcaactcatgaccaa
gaagaattagatttgaaagtacaagaatcaatcaaagcgtttcagaagaagaaacgcgaa
caagcgtttaaacggcgttatttggctgactatttatctgatactacgttaggttgggaa
actcacgatgtgaataaacagaaaatcatgagaatcgagcagtatcgaaaacggagggat
gatatcgagcaaagccaagagattgtgtgcggtcatatggaaacccagatgaaaaagaat
cccgcaaatccattctatgcagaatacgagaagctctgcacagaagaagttaccagtttt
gaaaccgaaactgatgatatcggacctcttgtcaactcaataaaagagttgagcagccac
attcgaatggctgaaacagaagaaattcggaagaaatatcaggagctgttggacatgcaa
aaaacgacgtatcaggcgttgcaacagaagaaaagagcggacagacgagatatgctgaga
aacaatgaaaaaaatgccaaacggtggagtcaaattgatttgaatttccgcgaaatactg
aacgaactcgaattttattccggacacgaaattgatcaattagagaaaaatgatgtttcc
attctcgacacaaccttcatcacacaaaatcattctggaaagagttattttcaaaaacga
tga
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