Caenorhabditis briggsae (nematode): CBG_08197
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Entry
CBG_08197 CDS
T01054
Symbol
Cbr-irx-1
Name
(RefSeq) Protein CBR-IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_08197 (Cbr-irx-1)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
CBG_08197 (Cbr-irx-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
8581876
NCBI-ProteinID:
XP_002639882
WormBase:
CBG08197
UniProt:
A0AAE9J2S0
LinkDB
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Position
I:complement(5936546..5939385)
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AA seq
390 aa
AA seq
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MMPIVGQCKLEVLKVEEPSTPSTTTPAPPSADALRGIIPSNILSQFPLHPAAMAQFLSAQ
AAAAQQPNLVFPGVPMFPPGIPADFKPELLMAAGGPGPMPFMFGDAHRLYHPYGLDGMKK
RNATREATAPLKDWLHAHRKNPYPSKNDKLMLAVGTGMTLTQVSTWFANARRRLKKENKM
TWSPQNRRGDGCDDDEDEDDDDMNRPSSSTSINSERKGESLFGKPHLASPTPSGGSGGSD
DLQTPKKEQNSPIPDDSESPKRKPKMWSIADVTTSDDDSSKKDSPPSSDENMTSNSLLIQ
SAMKKQMEMFSRIDPNIFRMNPFMFQLIAQQAAQSQQISLLPSQTTPPNEAGEQVKVSRS
EFASGDVDTIPTVFPNVISSVPPRVETPAY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctatcgtcggtcagtgcaaacttgaagtattaaaagtcgaagaaccctcaaca
ccatcaacaacaactccggctccaccctctgctgatgcacttcgaggaatcatcccatcc
aatattttaagtcaattcccacttcatccagccgccatggctcaattcctctccgctcaa
gctgcagctgctcaacagccaaatctagtattcccaggcgttccaatgttcccacctgga
atcccagcagattttaaaccagaacttttgatggctgctggcggtccaggaccaatgcca
ttcatgtttggagatgctcatcgtctgtaccatccatatgggttggatggaatgaagaaa
aggaatgcgactcgggaagcaacagcaccattgaaagattggcttcatgcgcatcgtaag
aatccgtatccatcaaaaaatgacaaactgatgctggcagttggaactggaatgacgtta
acgcaggtgtccacttggtttgccaacgctcgacgacgactgaagaaggagaacaagatg
acgtggtccccacagaacagaagaggagatggatgtgatgatgatgaggacgaggatgat
gatgatatgaaccgtccatccagctccacctctatcaattctgaaaggaaaggagaatcg
ctcttcggaaaacctcatctggcatctccaacgccttcaggaggatctgggggatcagat
gatcttcagacgccgaagaaggagcagaactctccaatcccagatgattcggaatcgcca
aaaagaaaaccaaagatgtggtccattgccgatgtcaccacttcagatgacgattcatcg
aaaaaggactcgccaccatcttccgacgagaatatgacatcaaatagccttctgatccag
tcggcgatgaagaaacaaatggaaatgttctctcggatagatcccaacatcttccgcatg
aatccattcatgtttcaattgatagcccaacaagcagcacagagccaacagatttctctt
ctgccatctcagacgacgcctccaaatgaagcaggtgagcaggtgaaggtgagcaggtct
gaattcgcaagcggagacgtcgacaccatccccactgtcttccccaacgtcatctcctcg
gtcccaccaagagtagagactccagcttattga
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