Caenorhabditis briggsae (nematode): CBG_08288
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Entry
CBG_08288 CDS
T01054
Symbol
Cbr-siah-1
Name
(RefSeq) Protein CBR-SIAH-1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04120
Ubiquitin mediated proteolysis
cbr04137
Mitophagy - animal
cbr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CBG_08288 (Cbr-siah-1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
CBG_08288 (Cbr-siah-1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
CBG_08288 (Cbr-siah-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_08288 (Cbr-siah-1)
Enzymes [BR:
cbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CBG_08288 (Cbr-siah-1)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
CBG_08288 (Cbr-siah-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
8576494
NCBI-ProteinID:
XP_045093732
WormBase:
CBG08288
LinkDB
All DBs
Position
IV:12869888..12873022
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AA seq
434 aa
AA seq
DB search
MSNRKGGGGAGDYQEVIESLRRSQLIFEEDENAGPEIPTVVTSSSSASSQRSSASQHHRL
NNMVVGGGGRDNEMSNNQNGNTPSVTIPSQCQVMTPRISSPSSVMAPSVTVTSGTVQQGK
TFARIQGSSPSNTTHSTPTVAQAMQSVAPHIPIVGAGADDSSAEILSVFECPVCLEYMLP
PYMQCPSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKIANTVRFPCKFSNSGCPLNFH
HIDKMDHEELCEYRPYSCPCPGASCKWQGALADVMDHLKKVHKSITTLQGEDIVFLATDI
NLPGAVDWVMMQSCFDYNFMLVLEKQEKYDPAQSTQMFYAVVQLIGSKKEADNFVYRLEL
SANRRRMSWEATPRSIHEGVAFAIQQSDCLAFDTSAAQLFAENGNLGINVTISRIDGQQR
RHPNESDAVDVEYD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcgaaagggaggaggcggtgcaggtgattatcaggaggtgatcgaatcgctg
cgacgatctcagctgattttcgaggaggacgagaacgctggccccgagattccgacggtt
gtcacctcgtcgtcttcagcatcgtcacagagaagctcagcgtctcaacaccatcgtctg
aataacatggttgttggaggaggaggaagagacaacgagatgtctaataaccaaaatggc
aacacaccatcggtgacaatcccgagtcagtgtcaagtgatgacaccccgaatatcatcg
ccatcatctgtgatggcaccgtcggttacagtaacctcgggaaccgtacaacaagggaag
acgttcgccagaattcaaggaagctcgccgagtaatacaacccactcgacaccaaccgtc
gctcaagccatgcaaagcgtcgctccacacatcccaatcgtcggagccggtgcagatgat
agcagtgctgaaattctatcggttttcgagtgcccagtttgtttggaatacatgctacca
ccatacatgcaatgcccatctggccatttggtgtgctcgaactgccgaccaaaacttcag
tgctgcccaacttgccgtggaccaactccatccgttcgcaacctgggccttgaaaagatc
gccaacactgttcgttttccatgcaaattctcaaactctggatgtcctctcaatttccat
cacatcgacaaaatggatcatgaggagttgtgtgaataccgcccgtattcctgcccatgc
cctggagcaagctgtaaatggcaaggagcactggctgatgtcatggatcatttgaagaaa
gttcataagagtattacaactcttcaaggagaggatattgtgtttttggctactgatatc
aatcttccgggtgctgttgattgggttatgatgcaaagttgcttcgattacaatttcatg
ttggtactggagaaacaggaaaagtacgatcctgctcagtcgactcagatgttctatgcg
gttgttcaattgattggatcgaagaaggaggctgataattttgtatatcgattggagttg
tctgcaaacagaagaagaatgtcgtgggaagctacaccaagatccattcatgagggtgtt
gcgtttgcgattcaacaatcggattgtttggcttttgatactagtgcagcacagcttttc
gcagagaatggaaacctaggaatcaacgtgaccatcagccgcatagacggacaacaaaga
cgtcatccgaatgaatccgatgctgtagatgttgaatacgactga
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