KEGG   Caenorhabditis briggsae (nematode): CBG_08288
Entry
CBG_08288         CDS       T01054                                 
Symbol
Cbr-siah-1
Name
(RefSeq) Protein CBR-SIAH-1
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04120  Ubiquitin mediated proteolysis
cbr04137  Mitophagy - animal
cbr04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CBG_08288 (Cbr-siah-1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    CBG_08288 (Cbr-siah-1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    CBG_08288 (Cbr-siah-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbr04121]
    CBG_08288 (Cbr-siah-1)
Enzymes [BR:cbr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CBG_08288 (Cbr-siah-1)
Ubiquitin system [BR:cbr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    CBG_08288 (Cbr-siah-1)
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING
Other DBs
NCBI-GeneID: 8576494
NCBI-ProteinID: XP_045093732
WormBase: CBG08288
LinkDB
Position
IV:12869888..12873022
AA seq 434 aa
MSNRKGGGGAGDYQEVIESLRRSQLIFEEDENAGPEIPTVVTSSSSASSQRSSASQHHRL
NNMVVGGGGRDNEMSNNQNGNTPSVTIPSQCQVMTPRISSPSSVMAPSVTVTSGTVQQGK
TFARIQGSSPSNTTHSTPTVAQAMQSVAPHIPIVGAGADDSSAEILSVFECPVCLEYMLP
PYMQCPSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKIANTVRFPCKFSNSGCPLNFH
HIDKMDHEELCEYRPYSCPCPGASCKWQGALADVMDHLKKVHKSITTLQGEDIVFLATDI
NLPGAVDWVMMQSCFDYNFMLVLEKQEKYDPAQSTQMFYAVVQLIGSKKEADNFVYRLEL
SANRRRMSWEATPRSIHEGVAFAIQQSDCLAFDTSAAQLFAENGNLGINVTISRIDGQQR
RHPNESDAVDVEYD
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgagtaatcgaaagggaggaggcggtgcaggtgattatcaggaggtgatcgaatcgctg
cgacgatctcagctgattttcgaggaggacgagaacgctggccccgagattccgacggtt
gtcacctcgtcgtcttcagcatcgtcacagagaagctcagcgtctcaacaccatcgtctg
aataacatggttgttggaggaggaggaagagacaacgagatgtctaataaccaaaatggc
aacacaccatcggtgacaatcccgagtcagtgtcaagtgatgacaccccgaatatcatcg
ccatcatctgtgatggcaccgtcggttacagtaacctcgggaaccgtacaacaagggaag
acgttcgccagaattcaaggaagctcgccgagtaatacaacccactcgacaccaaccgtc
gctcaagccatgcaaagcgtcgctccacacatcccaatcgtcggagccggtgcagatgat
agcagtgctgaaattctatcggttttcgagtgcccagtttgtttggaatacatgctacca
ccatacatgcaatgcccatctggccatttggtgtgctcgaactgccgaccaaaacttcag
tgctgcccaacttgccgtggaccaactccatccgttcgcaacctgggccttgaaaagatc
gccaacactgttcgttttccatgcaaattctcaaactctggatgtcctctcaatttccat
cacatcgacaaaatggatcatgaggagttgtgtgaataccgcccgtattcctgcccatgc
cctggagcaagctgtaaatggcaaggagcactggctgatgtcatggatcatttgaagaaa
gttcataagagtattacaactcttcaaggagaggatattgtgtttttggctactgatatc
aatcttccgggtgctgttgattgggttatgatgcaaagttgcttcgattacaatttcatg
ttggtactggagaaacaggaaaagtacgatcctgctcagtcgactcagatgttctatgcg
gttgttcaattgattggatcgaagaaggaggctgataattttgtatatcgattggagttg
tctgcaaacagaagaagaatgtcgtgggaagctacaccaagatccattcatgagggtgtt
gcgtttgcgattcaacaatcggattgtttggcttttgatactagtgcagcacagcttttc
gcagagaatggaaacctaggaatcaacgtgaccatcagccgcatagacggacaacaaaga
cgtcatccgaatgaatccgatgctgtagatgttgaatacgactga

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