KEGG   Caenorhabditis briggsae (nematode): CBG_08583
Entry
CBG_08583         CDS       T01054                                 
Symbol
Cbr-abcf-1
Name
(RefSeq) Protein CBR-ABCF-1
  KO
K06184  ATP-binding cassette, subfamily F, member 1
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:cbr03012]
    CBG_08583 (Cbr-abcf-1)
Translation factors [BR:cbr03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    CBG_08583 (Cbr-abcf-1)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N ABC_tran_Xtn AAA_29 AAA_22 RsgA_GTPase AAA_14 NB-ARC AAA_24 NACHT AAA_16 MMR_HSR1 AAA AAA_15 AAA_28 ATPase_2 AAA_18 AAA_23 RNA_helicase cobW ATP-synt_ab Death_3 DUF87
Other DBs
NCBI-GeneID: 8578287
NCBI-ProteinID: XP_045093816
WormBase: CBG08583
LinkDB
Position
V:8109682..8111738
AA seq 604 aa
MSDEGKKVTRKEAKKAKAKENYDKTILSMGGVVDNLPVVEGNQDEHGGIGSGAELGAHFT
VSQTSKTATQLTQMENSMDIKLENFDIAAQGKLLFDKANLTIVYGRRYGLVGPNGMGKTT
LLKHIGARRLAIPSHIDLLYCEQEIQVDSTSAIDTVVKSDKKRLSLLEEEAKLMEQIEQG
LTEAAERLQEVSEELRDIGAESAEPRARRILAGLGFSKAMQEKPCTDFSGGWRMRISLAR
ALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQTWKKTLLIVSHDQGFLDSVCTDIIHLDNQ
KLHSYRGNYTLFKKQYAQDLQVHEKNFDQQQKQLKAMKKKEKKGGKKNAAKQNDDDDAPS
AELLQRRKEYSVKFQFPETDKLNPPVLGLYGVTFGYGNDILFKNIDFGVDMDSRIAIVGP
NGVGKSTLLKLLIGKIEPQSGELRKHRTLRIGWFDQHANEALNGEQTPVEFLCTKFNIDY
QEARKQLGTTGLAAHAHIVKIRDLSGGQKSRVALCNLALGSPDIIILDEPTNNLDIESID
ALAEAIRDFNGGVLMVTHDERLVVRTDCNLWIVENQTVAEIDGDFDDYKKEVLDALGEAL
IAKK
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgtctgacgaaggtaaaaaagtgacacgaaaagaagccaaaaaggcgaaagccaaagag
aattatgacaaaactatcctgtcgatgggaggtgtcgttgataatcttccagttgttgaa
ggaaaccaggatgaacatggaggaatcggttctggtgcagagcttggtgctcacttcact
gtctctcaaacatctaaaactgcaacacaattgactcaaatggagaatagtatggatatc
aagctcgagaatttcgatattgctgctcaaggaaaactcctttttgataaggctaacttg
acaattgtctatggacgaagatacggattagttggacctaatggaatgggaaagacaact
ctattgaaacacattggtgctcggagacttgctattccatctcacattgatcttttgtat
tgtgaacaagaaattcaagtagacagcacctctgccatcgacactgttgtgaaatctgac
aagaaacgtttgtcacttttagaagaggaagcgaagcttatggaacaaattgagcaaggt
ctaactgaagccgctgaacgattgcaagaagtttccgaagagttgagagatatcggagca
gaaagtgccgaaccaagagcacgacgaattcttgctggtttgggattctcaaaggctatg
caggagaagccatgcactgatttttctggaggttggagaatgagaatttctctagccaga
gctcttttccttgagccaacactcttgatgcttgacgagcctaccaaccatcttgatctc
aatgcagtcatttggcttgacaactatttgcaaacttggaagaagactcttctcatcgtt
tctcacgaccaaggattcctggacagcgtttgcacggatatcattcatctcgacaaccag
aaactgcattcttaccgtggaaactatacacttttcaagaaacaatacgcccaagatttg
caagtccatgaaaagaatttcgatcagcagcagaagcagctgaaggcgatgaaaaagaag
gaaaaaaagggaggcaagaaaaacgcggctaaacaaaatgacgacgacgatgcaccatcc
gctgaacttctccaacgtcgcaaagaatattctgtaaagttccagttccctgaaactgat
aagttgaatccaccagttctcggattgtacggagtgacattcggttacggaaacgatatt
ctcttcaagaatattgatttcggagtggatatggattcaagaattgctattgttggacca
aatggagttggaaagtctactcttctcaagttgttaatcggaaaaattgaaccacaatcc
ggagagctccgcaaacaccgaacccttcgcatcggatggttcgatcagcacgccaacgag
gctttgaatggcgaacaaacacctgttgagttcctttgtaccaaattcaacatagactat
caagaggctcgtaagcaactcggaacaactggactcgctgcacacgcccacatagtcaaa
attcgagatctttccggaggacaaaaatcaagagttgctctgtgtaatttggctcttggt
agtccagatatcatcattcttgacgaacccacaaacaatttggatatcgaatcaattgat
gctttggctgaagcaatccgtgacttcaacggtggcgtgctgatggttactcacgacgag
cgactcgtggtgcgaactgattgtaatttatggattgtggagaatcaaacggtggctgag
attgatggagactttgatgactacaagaaggaagttctggatgccctgggagaagctctc
attgccaagaaataa

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