Caenorhabditis briggsae (nematode): CBG_08583
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Entry
CBG_08583 CDS
T01054
Symbol
Cbr-abcf-1
Name
(RefSeq) Protein CBR-ABCF-1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cbr03012
]
CBG_08583 (Cbr-abcf-1)
Translation factors [BR:
cbr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CBG_08583 (Cbr-abcf-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ABC_tran_Xtn
AAA_29
AAA_22
RsgA_GTPase
AAA_14
NB-ARC
AAA_24
NACHT
AAA_16
MMR_HSR1
AAA
AAA_15
AAA_28
ATPase_2
AAA_18
AAA_23
RNA_helicase
cobW
ATP-synt_ab
Death_3
DUF87
Motif
Other DBs
NCBI-GeneID:
8578287
NCBI-ProteinID:
XP_045093816
WormBase:
CBG08583
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Position
V:8109682..8111738
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AA seq
604 aa
AA seq
DB search
MSDEGKKVTRKEAKKAKAKENYDKTILSMGGVVDNLPVVEGNQDEHGGIGSGAELGAHFT
VSQTSKTATQLTQMENSMDIKLENFDIAAQGKLLFDKANLTIVYGRRYGLVGPNGMGKTT
LLKHIGARRLAIPSHIDLLYCEQEIQVDSTSAIDTVVKSDKKRLSLLEEEAKLMEQIEQG
LTEAAERLQEVSEELRDIGAESAEPRARRILAGLGFSKAMQEKPCTDFSGGWRMRISLAR
ALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQTWKKTLLIVSHDQGFLDSVCTDIIHLDNQ
KLHSYRGNYTLFKKQYAQDLQVHEKNFDQQQKQLKAMKKKEKKGGKKNAAKQNDDDDAPS
AELLQRRKEYSVKFQFPETDKLNPPVLGLYGVTFGYGNDILFKNIDFGVDMDSRIAIVGP
NGVGKSTLLKLLIGKIEPQSGELRKHRTLRIGWFDQHANEALNGEQTPVEFLCTKFNIDY
QEARKQLGTTGLAAHAHIVKIRDLSGGQKSRVALCNLALGSPDIIILDEPTNNLDIESID
ALAEAIRDFNGGVLMVTHDERLVVRTDCNLWIVENQTVAEIDGDFDDYKKEVLDALGEAL
IAKK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaaggtaaaaaagtgacacgaaaagaagccaaaaaggcgaaagccaaagag
aattatgacaaaactatcctgtcgatgggaggtgtcgttgataatcttccagttgttgaa
ggaaaccaggatgaacatggaggaatcggttctggtgcagagcttggtgctcacttcact
gtctctcaaacatctaaaactgcaacacaattgactcaaatggagaatagtatggatatc
aagctcgagaatttcgatattgctgctcaaggaaaactcctttttgataaggctaacttg
acaattgtctatggacgaagatacggattagttggacctaatggaatgggaaagacaact
ctattgaaacacattggtgctcggagacttgctattccatctcacattgatcttttgtat
tgtgaacaagaaattcaagtagacagcacctctgccatcgacactgttgtgaaatctgac
aagaaacgtttgtcacttttagaagaggaagcgaagcttatggaacaaattgagcaaggt
ctaactgaagccgctgaacgattgcaagaagtttccgaagagttgagagatatcggagca
gaaagtgccgaaccaagagcacgacgaattcttgctggtttgggattctcaaaggctatg
caggagaagccatgcactgatttttctggaggttggagaatgagaatttctctagccaga
gctcttttccttgagccaacactcttgatgcttgacgagcctaccaaccatcttgatctc
aatgcagtcatttggcttgacaactatttgcaaacttggaagaagactcttctcatcgtt
tctcacgaccaaggattcctggacagcgtttgcacggatatcattcatctcgacaaccag
aaactgcattcttaccgtggaaactatacacttttcaagaaacaatacgcccaagatttg
caagtccatgaaaagaatttcgatcagcagcagaagcagctgaaggcgatgaaaaagaag
gaaaaaaagggaggcaagaaaaacgcggctaaacaaaatgacgacgacgatgcaccatcc
gctgaacttctccaacgtcgcaaagaatattctgtaaagttccagttccctgaaactgat
aagttgaatccaccagttctcggattgtacggagtgacattcggttacggaaacgatatt
ctcttcaagaatattgatttcggagtggatatggattcaagaattgctattgttggacca
aatggagttggaaagtctactcttctcaagttgttaatcggaaaaattgaaccacaatcc
ggagagctccgcaaacaccgaacccttcgcatcggatggttcgatcagcacgccaacgag
gctttgaatggcgaacaaacacctgttgagttcctttgtaccaaattcaacatagactat
caagaggctcgtaagcaactcggaacaactggactcgctgcacacgcccacatagtcaaa
attcgagatctttccggaggacaaaaatcaagagttgctctgtgtaatttggctcttggt
agtccagatatcatcattcttgacgaacccacaaacaatttggatatcgaatcaattgat
gctttggctgaagcaatccgtgacttcaacggtggcgtgctgatggttactcacgacgag
cgactcgtggtgcgaactgattgtaatttatggattgtggagaatcaaacggtggctgag
attgatggagactttgatgactacaagaaggaagttctggatgccctgggagaagctctc
attgccaagaaataa
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