Caenorhabditis briggsae (nematode): CBG_09003
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Entry
CBG_09003 CDS
T01054
Name
(RefSeq) Protein CBG09003
KO
K13192
RNA-binding protein 26
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbr01009
]
CBG_09003
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_09003
03041 Spliceosome [BR:
cbr03041
]
CBG_09003
Protein phosphatases and associated proteins [BR:
cbr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CBG_09003
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
CBG_09003
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CBG_09003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
zf-CCCH
Nup35_RRM_2
zf_CCCH_4
DUF1866
zf-CCCH_2
YwqH-like
RRM_1
MCPVI
zf-CCCH_9
Torus
Motif
Other DBs
NCBI-GeneID:
8583144
NCBI-ProteinID:
XP_002641151
WormBase:
CBG09003
UniProt:
A8X813
A0AAE9IPM8
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Position
III:complement(4330034..4332655)
Genome browser
AA seq
735 aa
AA seq
DB search
MNIENQDAFFQWLCDELTPIADADPIALAKYVLALVKKPDKGQEELKEFTKEQLNVFLQD
HTAPFVDKLFDALTSKSYLPAESAKPAQAAPKQTSPPKEEASKPESARQSSPSSGVQKPS
SSSSSSKSDNKPARKRISPPPSENREKEKSARDKERRRSRSPRDRRGRQAPSSRSGRASS
NDRDRERHRRRSRSRSRSSSGSRTPPYKARSSRRRCKDFEERGYCIRGDQCPYYHGRDPV
VVDENALSSMVPIPSAPPNFSLPPPGYNAINPPPPGVVVSAGEYNPETPALTNYSMPPPP
IPGTIPGTIPGGWSQQLPAAPQYVPQPVTNFSQPPPSTGGAVPIVPQQPGSFRGGIRGRG
APRGRGSFTRGGFAGNINRENCTLQVAKIPAEMNNIAKLNEHFATFGVVDNIQVRYNGEI
DAALVTYASKHDAYKAYKSPAPVLNNRFIKVFWHNPGGEGIDAAAAKSNAPTSPPKPTER
PKIATVQESKFVNVAALNHRKQLQEAKEKLTNEKSLLSALVEAQNQHNVILDKWLARQKE
LLIKARTSPDEAERKNATKLVKHLHKKVKACKEEIDSILLKISEKSMLVDEIVAQIESLK
SPNKFEDPSRKRKAASDGEEPQNKLNSIVVVKHVKEELVTDLMAHMEKFGEVFDHSVKAE
DDGLMTAVFPFRKTADALTVMEEGKVLNGVSLDMELKTEKIEEIPSTDTNMSADQLLAAI
PSSLESDEDDDLLND
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgagaatcaggatgctttcttccagtggctctgtgatgagttgaccccgatt
gccgatgccgatccaattgccctggcaaaatatgtgctcgcattggtaaaaaagcccgat
aagggtcaagaagagctgaaagaattcaccaaagagcaattgaatgtctttttgcaagat
cacactgctccatttgttgataagttgttcgatgcgttgaccagcaagagttatttacct
gcggaaagtgcgaaacctgcccaggctgctcccaagcaaacatcgccacccaaggaagag
gcatcaaaaccagagtctgctcgccagtcgtctccctcatctggagttcagaagccgagc
agctcgtcatcttcttcgaaaagtgacaacaaaccagcgcgcaagcggataagtccacca
ccatcggagaatcgcgaaaaggagaaatcagctcgcgacaaggaaagacgtcgttctcgc
tctccgcgcgatcgtcgtggtcgtcaggctccatcatcacgtagtggacgagcttcatct
aatgatcgagatcgcgaacgtcaccgacgacgatcacgttcaagatcgagatcatcaagt
ggctcacggacacctccatacaaagctagatctagtcgacgccgttgcaaagacttcgaa
gagcgtggatattgcattcgtggggatcaatgtccgtactaccatggtcgtgaccctgta
gttgtcgatgaaaacgcactcagttctatggtcccaatcccttctgctcctcctaatttc
tctttaccaccacctggatacaacgcgatcaatccacctccacctggagttgtcgtgtct
gctggagaatacaatccagagacacctgcgttgacaaactacagtatgccaccaccacca
attccgggaactatcccgggaaccattcctggaggatggtctcagcagcttccggctgct
cctcaatacgtaccacaaccggtgacaaacttttcgcaaccaccaccttcaaccggcggt
gctgtacctattgttccgcaacaaccagggtctttccgtggaggaattcgtggaagaggt
gctccgagaggtcggggaagttttactcgtggaggtttcgctggcaatatcaacagagaa
aactgcactttacaagtggcgaagattccagctgaaatgaataacatcgctaagctgaac
gaacattttgctacctttggagtagttgacaacatacaagttcgatacaacggggaaatt
gatgcagcgctcgtaacatacgcatctaagcatgacgcttacaaggcatacaagtcacca
gctcccgttctcaacaaccggttcattaaagtgttttggcacaacccaggaggtgaagga
atcgacgctgcagcagccaaatcgaatgctccaacatcaccaccgaaaccaacggaacgg
cctaaaattgcaaccgtgcaagaatcgaaatttgtcaacgtagcagctctcaatcacagg
aaacagcttcaagaggctaaggagaaattgacaaacgagaagagcttgttatcggcactt
gtagaagctcagaatcaacacaacgtgattcttgataaatggttggccagacagaaagag
ctacttatcaaagcaagaacgtctcctgatgaggctgaaagaaaaaacgctactaagttg
gtcaagcatctgcataagaaagtcaaagcgtgcaaagaagaaatagattcgattcttttg
aaaatttctgaaaagtcaatgctcgtggatgaaatagttgcccaaatcgaatctttgaaa
agtccgaacaagtttgaagacccgagcaggaaaagaaaagcagcaagcgatggggaggaa
ccgcagaacaagttgaatagcatcgtcgtcgtcaaacacgtaaaggaagaattggttacc
gacttaatggctcatatggaaaaattcggagaagtttttgatcatagtgtgaaagccgaa
gatgatggtcttatgactgccgtctttccatttagaaagactgctgatgccctgacggtg
atggaagaaggaaaagtgctcaatggagtatcgctggatatggagttaaagaccgagaag
atcgaggaaatcccttcaacagatacaaacatgtcggctgaccagttgctcgcagccatc
ccgagcagtcttgagtcggacgaggacgatgatcttctaaatgactag
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