KEGG   Caenorhabditis briggsae (nematode): CBG_09136
Entry
CBG_09136         CDS       T01054                                 
Symbol
Cbr-hmg-4
Name
(RefSeq) Protein CBR-HMG-4
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cbr03000]
    CBG_09136 (Cbr-hmg-4)
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_09136 (Cbr-hmg-4)
Transcription factors [BR:cbr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    CBG_09136 (Cbr-hmg-4)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     CBG_09136 (Cbr-hmg-4)
SSDB
Motif
Pfam: PH1_SSRP1-like SSrecog POB3_N Rttp106-like_middle HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 8584580
NCBI-ProteinID: XP_002642586
WormBase: CBG09136
LinkDB
Position
III:complement(11749854..11754960)
AA seq 695 aa
MEFPGVYLEDMGLLALGTLKLTDKSLSFKSEKGGRSVTVAGDDIDGLKWQKLGNKPGLRV
GVNDGNVHRFGGLQDADLERLQKFTDAHWSRPIEQSNLFIKGWSYGQAEVKGRNIEFSWE
DKPIFEIPCTNVSNVTANKNEAVLEFHQNDNAQIALMEMRFHMPVDAETEEDVDKVEEFK
KAVLAYAGLEAETEQPIVLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPIKSINRL
FLVPHKDGRSVFFVLSLNPPIRQGQTRYSYLIMDFPKDEEQELELSLTDEQLEESNGALK
RTMDGPIYKTVSVVFKAICNLKITEPGRFIGHSGTPAIQCTHRQNPGLLYPLEKGFLFIH
KPAMYLRYEDVSSCHLARSDGGTVTRTVDFEVDMKSGGPIIFNTMEKEENNKLFDYLSKK
NIKIRNPTRVDARAAESSDDEIDPYKAAVKAEGRKRDESDDDESTDEDYDLDKDLKDRKT
KEKDSSEGSASEPDDEYDSGSEQDSSGTGESEPDSEEDVPSKKRKSDPKEKREKKEKKEK
EGGKKGKKEKDPNAPKRAQSAYFHWFNANRLSLKEDGDSVADVAKKAGAKWKTLGAEDKK
EWEAKAEKDKTRYETEMKEYRKSGGGGSSSSKPTTSSKKSSGPSTSKAISKEYISDSDDS
DEEEKPKKKEKKAAPKEESEDEEEESEASDASDSD
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggaattccccggagtctatctagaagacatgggtcttctagcgctcggaacccttaag
ctcactgataaatcattgagctttaaatctgaaaaagggggaagatcggtgacggttgcc
ggcgacgatatcgatggtttgaagtggcaaaagctgggaaataagcctggactccgtgta
ggcgtcaacgatgggaatgtgcatcggtttggagggttacaagatgcggacctggaaaga
ctgcaaaaattcacggatgcccactggtcccgacccatcgaacaatccaatttattcatc
aaaggatggtcctacggtcaagcagaagtcaagggcagaaatatcgaattctcgtgggag
gacaagccgattttcgagattccctgcacaaatgtttctaatgtcaccgccaacaagaat
gaagccgttctagaattccatcaaaatgataatgctcaaatcgcgctgatggagatgagg
ttccatatgccagttgatgcagaaactgaagaagacgtggataaagtggaagaattcaaa
aaggcagtgctggcttacgctggtctggaggcggagactgagcaaccgattgtgctccta
acggatattttgtgtacgacgccacgtggaagatatgatatcaaggtgtacccgacgagt
attgcactgcatggaaagacttatgactacaagattcctattaaatcgatcaatcggttg
ttcttggtgcctcataaggatgggcggagtgtgttctttgtgctttcgttgaatccaccg
attcggcaggggcagactagatatagttatttgattatggatttcccgaaggatgaggag
caagagttggagttgtccctgactgacgaacaactggaagaaagcaatggggctctgaaa
cgcactatggacggtcccatctacaaaaccgtctccgttgttttcaaagcgatttgcaac
ctcaaaatcacggaacccggacgctttatcggtcattctggcaccccagccatccaatgt
acgcatcgccagaatccaggattactgtacccactggaaaaaggattcttgttcatccat
aagccagcaatgtaccttcgctatgaagacgttagctcgtgtcatctagcaaggtctgat
gggggtacagtaacccgaactgtggatttcgaagtggatatgaagtcaggaggacctatt
atcttcaatacaatggagaaggaggagaataacaagttgtttgattatttgagcaagaag
aatatcaaaattcggaatccgacgagggtggacgcgagggctgccgagtccagtgatgat
gaaattgacccttataaggcggcggttaaggcggaaggtcgcaaaagggatgaatctgac
gacgatgaatccactgacgaggactacgatcttgacaaggatctcaaggatcgtaagacc
aaggagaaggactcgtcagaaggatcagcgtcagagccagatgatgagtacgattcggga
tctgagcaggattctagtggaactggagaatccgaaccggattctgaggaagacgtgcca
tcgaaaaagcggaaatcagaccctaaggagaagagggagaagaaggagaagaaagagaaa
gagggaggaaagaagggaaagaaggagaaggatccgaatgcgccgaaacgagcccaatcg
gcgtacttccattggttcaatgcgaatcggttgtcgttgaaggaggatggagattcggtg
gccgacgtggcgaagaaagctggagccaagtggaagacgttgggagcggaggataagaag
gaatgggaagcgaaggcggaaaaagacaagactcgatatgagaccgaaatgaaggagtat
cggaagagcggaggcggtggatcctcctcctccaaaccaacgacgtcttctaagaagtca
tctggaccatcgacgtcgaaggccatctccaaggaatatatcagtgattctgatgattct
gacgaggaggagaagccgaagaagaaggagaagaaggcggcgccgaaggaggagtcggag
gatgaagaggaagaatcggaagcttctgatgcatcggattcggattaa

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