Caenorhabditis briggsae (nematode): CBG_09171
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Entry
CBG_09171 CDS
T01054
Symbol
Cbr-clk-2
Name
(RefSeq) Protein CBR-CLK-2
KO
K11137
telomere length regulation protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03460
Fanconi anemia pathway
cbr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CBG_09171 (Cbr-clk-2)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
CBG_09171 (Cbr-clk-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbr03032
]
CBG_09171 (Cbr-clk-2)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_09171 (Cbr-clk-2)
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_09171 (Cbr-clk-2)
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CBG_09171 (Cbr-clk-2)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Chromatin remodeling factors
ASTRA complex
CBG_09171 (Cbr-clk-2)
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
CBG_09171 (Cbr-clk-2)
Check point factors
Triple T complex
CBG_09171 (Cbr-clk-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Telomere_reg-2
HAD_2
Motif
Other DBs
NCBI-GeneID:
8584605
NCBI-ProteinID:
XP_045093944
WormBase:
CBG09171
LinkDB
All DBs
Position
III:11956261..11963466
Genome browser
AA seq
895 aa
AA seq
DB search
MDLRYRLTNVTERAVLFQIAKDVVENPSKYHNAVREFVVSLDCFSKFLTDKEFYSILLPI
LDTQNPAESIIGISKSMATVTSPTSHANTFRDVMTVLQWLKYLVEKFMKSVIFDSLKVRQ
PDEDQYLLYQEFAKACINLPEKISNCEAKATTMEHIQFIQGVKDVLKATILDGIQQALIT
AHQQSSKTENLKIIAQLISAGRDMRINDKHHLLESLILWIGKIKEWDETWAKIMNILFLE
PTELGVQVHESLLTSVFSCAKTDATLQRCIEAERLEGVLRRVVLVKLPFQRILTPRNIKI
LVNFVHRTCEESAVELLQTAIQLWSDANYTRQASETQERHLVRIILYSIYLVQKSPSLAS
RIQWNDLFILSMDGIHYRNNLMPTHIQSALYLTDVLCKMAQSQMPEMAPPSQNGNSEEVK
SEGAWQEEMKAIMTDGWGEAKKTKYVAAAPEEESPEAHMEMEGEREDPVGNILMIPDDDS
ENEEASEDLVNDGVVEMEAPPRRRLHLFRPDPITGERPEPFLPYVPPPRPQLDSDDDEDF
PTYKVPEAEKNLTKLETGEEPRRKVERVVYIQDAFEKLLEKERYEIFEEALYSLKELIER
EAIGFADIAEKLFVRLINLQNLFGTKNFSETCDLCALLCIKHRPQIVPALVRLILSPGQG
LQKQNHLLHLIHRAADELGTLDPGSENSMLQQEFIFEAITMEGLTQATRRGPEEIGPGLA
TTAHESLLKRTRRFGTRQKPAIGSVNQLSRNAKYMFYPLLVIPRGDNAGLFTKDSDLLAY
IIMIASMVYVRCGVTEQTARMSTELIAYAAPHRFSENTKLRSASLAAYLNVLCTVPAGLL
REIFPQEIRQEWMDWAEGIQRFKDSTELEFTMAHQMESILKARAQQYEEISVLNL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcgctatcggctgacgaacgttaccgaacgggcggttttgtttcagattgcc
aaggatgtcgtagaaaacccatcgaaataccataacgcggtgcgagagtttgtggtgtcg
ttggactgttttagcaagtttttgacggataaagagttctacagtatcctccttcccatc
ctggacacccaaaaccctgcggaatcgataattggaatttcaaaaagcatggctacagta
acttcgcccacatctcatgctaacacatttcgagacgttatgacagtactccagtggctg
aaatatctagtggaaaaatttatgaaatcagtgatttttgatagtttaaaagttcgacaa
cccgatgaagaccaatacttgctctaccaggagttcgcaaaagcctgcatcaatttgccc
gagaaaatttcaaattgcgaggcgaaagcgacgacaatggagcatattcagttcattcag
ggtgtgaaggacgttttgaaggccacaatcctcgatggaatccaacaagctctcatcacc
gcccatcaacaatcatcgaaaaccgagaatctgaaaatcattgctcagcttatctcggcg
ggtcgtgatatgcgaatcaacgataagcaccatcttctcgaaagtcttattttatggata
gggaaaatcaaagaatgggacgaaacctgggcgaaaatcatgaatattctgtttttggag
cccaccgaactcggcgttcaagtccatgaatctctactgacttctgtattttcatgtgcc
aaaacagatgccacgttgcaaaggtgtatcgaagcagagagattagaaggcgttctgcga
agagtggtgctcgtaaaactgcctttccaacgaattctgacccctcgaaatatcaaaatt
ctggtgaatttcgttcatcgaacttgtgaagaatcggcagtggagcttttgcagactgct
atccagctgtggagcgacgccaactacacccgccaggcgtcggaaacccaggaacgacat
ctagttcggattattctctattcgatttatttggttcaaaaatccccctccctagcctcc
cgaatccaatggaacgacctgttcattctctcaatggacggcattcactaccgtaataat
ctcatgccgacgcatattcaaagtgcgctctatctgacagacgttctttgtaaaatggcg
cagagtcagatgccagaaatggctccgccctctcagaatggaaattctgaagaagtgaaa
agtgaaggggcgtggcaagaagagatgaaggcgattatgacggatggatggggagaagcg
aagaagaccaaatacgtggcagcagctccagaagaggagtcgcccgaggcgcatatggag
atggagggagagcgagaggacccggttggcaatattctgatgatcccagacgatgattcg
gagaatgaggaggcttctgaagacctggtaaacgacggtgttgtagaaatggaggctcct
ccacgccgtcgtctccacctcttccgcccggatcctatcaccggagagcgaccagaacca
ttcctcccttacgtccctcccccacgtccccagctagattcagatgacgatgaggacttt
cccacctacaaagtgccagaagcggaaaagaatctgacgaaattggaaactggagaagag
ccgagaagaaaagtggagagggttgtgtacattcaggatgcctttgagaaattattggag
aaagagagatatgagattttcgaggaggccttgtacagtttgaaggagcttatcgagcga
gaagcgattggatttgcggacattgctgagaaattgttcgtgcggttgatcaatttgcag
aatctcttcggcacgaaaaacttttcggaaacgtgcgatctatgtgccctattgtgcatc
aagcaccgcccacaaatcgttccggcgctggtccggctgattttgtctccgggacaggga
ctccagaagcaaaatcatctattgcatctgattcatcgagccgccgacgagctgggcact
ctggatccgggaagtgagaactcgatgcttcagcaggaattcatattcgaagcgattaca
atggagggcttgacacaagcgactcggcgaggtccagaagaaatagggcccggtttggca
actactgctcatgagagtttgctgaaaagaacgcggcgattcgggacacggcagaagcca
gcgatcggaagtgttaatcaattatcgaggaacgccaagtacatgttctacccgttgttg
gtgataccgagaggagacaatgcggggctttttaccaaagactctgatctgctcgcctac
atcattatgattgcctcaatggtctatgtccgttgcggtgtcaccgagcagaccgcccga
atgtctacagaactcatcgcctacgcggcaccccatcgattttcggaaaatacgaaactt
cgctctgccagcctagccgcctatcttaatgtgttgtgtacggtacctgctgggcttctc
cgagagatatttcctcaagaaatccgtcaagaatggatggattgggctgaggggattcag
agattcaaggattctacagaattggaattcaccatggcacatcaaatggagtcgattcta
aaggcacgcgcacaacaatacgaggagattagtgtcttgaatctgtga
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