Caenorhabditis briggsae (nematode): CBG_09527
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Entry
CBG_09527 CDS
T01054
Symbol
Cbr-hpo-22
Name
(RefSeq) Protein CBR-HPO-22
KO
K24741
WD repeat-containing protein 20
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cbr04990
]
CBG_09527 (Cbr-hpo-22)
Domain-containing proteins not elsewhere classified [BR:
cbr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
CBG_09527 (Cbr-hpo-22)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
8579030
NCBI-ProteinID:
XP_045094021
WormBase:
CBG09527
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Position
V:10871602..10874571
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AA seq
763 aa
AA seq
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MHQNSLGPATSGIGGNLNTAYPPSQNDCILLQHAQPGREEREIKKIFAIEDGVYQTVKHA
EISRPKPLSHYQVPPGLVAAANQMAGASSTVRVSFLDFSSRDVIQPDVAVECSSSYDPNK
QDENGSPMMRSQNEENEKSIICFNVGKELYMYAYRGTRTKTDLTRPIDKRVYKGTAPSCH
IFNQEKSSASTSQLLIGFTLGQLQIIDPLDKISATPSSKLYNEDRYIEKTAVTCLRFLPG
EPNIFLSSHVSGNLYVYDERISAISSSGNGSSQSPPWHVQTQVLSIDLIGYRMFFPVQGY
GYTTYSWKTKHPRNPTTRWQIGSGTIHQFNFSGPDTKMLATVSHDGFLRIFNYETQELMS
CMKSYFGGLLTLAWSPDAKLIATGGEDDLLTVYDVAEKKVVCRGQAHKSWISQVQFDPYV
VRRSKKDPESNGRSSMTALDDVSREMDTRCMPSTSTDPNFGYTKPTSTMSRNSLASASVT
QRADEIVYRIGSVGHDTFLCLWDITNEILNKGNHRRHRNSTIIATNAALDIDHLSGKLED
LPELSPGVGEPSTNSEQPLLDANRPAPPQEKPPKKKRFNRKAFGLSKFTSSGNASTSTSA
VGSRANPTNANASSVDIVARLGSPSCPGIRDVPIIEPLTCKKVSHDRLTVLEFRKDCVVT
ACQEGFICTWSRPSDRDDVKQDNLSSTAAATPESEQKPSVSATASFGYGSEISNGVTGSR
SSSNFSTHELQQLRSPNATSPSYRVGASTSAYHRPMYAWQNAN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagaacagtctaggaccggcgacgtctggaataggtggtaatctcaatactgcg
tatccaccttcacaaaacgattgtattcttctgcaacacgctcaaccgggacgagaagag
agagaaatcaaaaaaatattcgctatcgaagacggagtatatcaaacagtcaagcacgca
gaaatatcccgtcccaaacctctttcacactaccaagttccaccaggacttgtggcggcg
gctaatcagatggcaggcgcaagttcgaccgttcgtgtcagtttccttgatttttcatct
cgagatgttatccaacctgacgtagccgtggaatgctcctcctcttatgacccgaataaa
caagatgaaaacgggtctcctatgatgcgtagccaaaatgaggaaaacgagaagtctatt
atttgcttcaatgtcggcaaggaactctatatgtatgcgtacaggggtacgcggaccaag
acggatctgactcgaccaatcgacaaaagagtttacaaagggactgccccatcttgccac
atttttaatcaagaaaaatcatcagcatcaacaagccagttactcataggatttacactt
ggccaactacagatcatcgatcccctagacaaaatatctgctacaccttccagtaaacta
tataacgaagatcggtacattgagaaaacggcagtaacatgtcttcgcttccttcctggc
gaaccgaatattttcctgtcgtctcatgtatcaggaaacctgtacgtttacgatgagaga
atttccgctatctcaagctcagggaatggtagttcgcagtcaccaccgtggcatgttcag
acgcaggtattgtcgatagacctgatcggatatagaatgttttttcctgttcagggatat
ggttacactacttactcctggaaaacgaaacatccacgaaaccccaccacaaggtggcag
attggtagtggaacgattcaccagttcaatttttctggacccgacacgaaaatgttggca
actgtttctcacgatggatttcttcgaattttcaattatgagacacaagaattgatgtcc
tgtatgaaatcttattttggtggcctactaactcttgcatggagtccagatgcaaaattg
attgcaactggaggcgaggacgatcttttgaccgtatatgatgttgctgagaagaaagtt
gtctgtcgtggtcaggcacataaaagctggatcagtcaagttcaatttgatccttacgtt
gtgcgcagatcgaagaaagacccagaaagcaatggtagatcctctatgacagctttagat
gatgtctccagagaaatggatactcgttgtatgccatcaacgagtactgatccaaacttt
gggtacacaaaaccaacatcgacgatgtcgcgaaactcactggcttctgccagcgtgaca
caacgagctgatgaaatcgtctatcgaatcggaagtgtgggacacgatacattcctatgt
ttgtgggacatcacaaacgaaattctcaacaaaggtaatcatcgtcgtcatcgaaattcg
acaattattgcaacaaatgccgccttagatatcgatcacttgtccggaaagctcgaggat
ctacctgagctgtcacctggtgtcggagaaccaagcacaaactctgagcaaccactactc
gacgcgaatcgaccagccccaccacaagaaaagcccccaaagaagaagcgtttcaacaga
aaagcttttggactttcgaagttcacctcttctggaaacgcaagtacaagtaccagtgct
gtaggaagtagagctaatccaacaaatgccaacgcatccagtgttgacatagtcgcacgt
ttgggctctccttcttgtcctggaattagagacgtacccatcatagaaccacttacatgc
aagaaagtttctcatgatcgtttgacagtgcttgagttcagaaaggactgtgttgttact
gcgtgccaagaaggcttcatttgcacttggagccggccatctgaccgagacgacgtgaaa
caagataatctcagttcaacagcggctgcgacgccagaatcagaacagaaaccttctgtt
tcggccaccgcatcgtttggttatggatcagaaatatcgaacggtgttactggatctcgt
tcgtctagtaacttcagtacccatgagctacaacaactccgctcgccgaatgccacatct
ccttcatatcgagtgggcgccagtacttctgcttatcaccgtcccatgtatgcatggcaa
aacgccaactaa
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