KEGG   Caenorhabditis briggsae (nematode): CBG_09538
Entry
CBG_09538         CDS       T01054                                 
Symbol
Cbr-cul-5
Name
(RefSeq) Protein CBR-CUL-5
  KO
K10612  cullin 5
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CBG_09538 (Cbr-cul-5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbr04121]
    CBG_09538 (Cbr-cul-5)
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_09538 (Cbr-cul-5)
Ubiquitin system [BR:cbr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     CBG_09538 (Cbr-cul-5)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     CBG_09538 (Cbr-cul-5)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 8579040
NCBI-ProteinID: XP_002637044
WormBase: CBG09538
UniProt: A0AAE9A4C6 A8X8V4
LinkDB
Position
V:complement(10833225..10836142)
AA seq 766 aa
MLFDDEWVKAEPIVNALLHQKTVTPAEWQDLFFYVYKITSWVDEGPKKIRDILTRDINAY
VLEASERIKTLQSGESLLNAYISEWNRFYRQSSILPLPFKKLDDSSKPRANVPEQGQDTI
RAVMLEKWNDIIFTKICDQLLAEALRLIKEERDGNIINSENVIGIRESFVTLNEKFPEPS
LTIYQKSFEKQFVEQTSIYYKKICGKLLNELGVLEYMVYADKKLDEEQQRAQKYLEMGSP
TASQHMESVVIALVENFEDIILAECAKLIAHRDVDRLQRLYRLIRRTRSGIETVLKCIDQ
HIRTEGLNDMRNNAESLATDPEKYVQQLLIMFDKFSALVREGFCDDARLLTARDKAFRAV
VNDSSIFKTEMMNKKSRMLSVESKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLGQVLL
VLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLRECGMPSDAVNKLSRMLQD
IELNKDMNTLFKKVLTGTNNNKSIADSINLKVLNGGAWGRGGSERIRFSLPRELEDFVPE
MEAFYKKHHNGRKLNWMHHWSSGTMVFGTASGGRFDLEITTFQMAVLFCFNERAHEKISL
ETLRLATELPDAELNRTLLSLVSYPKMRSQILLCDVASQNITARDFTDSTKFSINHNFHL
VKNGKSQQRGKVNLIGRLQLSLEANAEKEHESIVALREYRVQEGIVKILKTRKTITLAQM
TMELVEILKPLFIPNRRIIKEQIDWLIENRFMERRPDDINTFVYLA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgctgttcgacgatgagtgggtaaaagcggaaccaattgtgaacgcccttcttcatcaa
aaaacggtaactccagcggaatggcaagatctcttcttctatgtctacaaaatcacatca
tgggttgatgaaggcccgaaaaaaatacgagacattttaactcgagatataaacgcctat
gttcttgaagcaagtgaaagaatcaaaacattgcaatcaggcgagagtcttctcaatgcg
tacataagtgaatggaatcgattctaccgacaatctagtattttgccacttcctttcaaa
aagctggatgatagctccaaaccgcgagccaatgtgcccgaacaaggtcaagacactatc
cgagcagtgatgctcgaaaaatggaacgatatcatattcacaaaaatatgtgatcaactg
cttgcggaagctcttcgactgatcaaagaagaacgagatggaaacattattaattcggag
aatgtgatcggaattcgtgaaagcttcgttaccctgaacgaaaagttcccagagccgtct
ctgactatctaccaaaaatcgtttgagaagcagtttgttgaacaaacatcaatatattac
aagaagatttgtggaaaacttctcaatgaactcggtgtactcgaatatatggtttatgca
gacaaaaagctagacgaagaacagcaacgagcgcagaagtatctggaaatgggctcacca
actgcatctcaacatatggagtcggttgtaattgcattggtagaaaactttgaagacatc
attttggcagaatgtgcaaaactgattgctcatagagatgttgaccgtcttcaacgtctg
taccgcctgataagacgtacaagaagtggtattgaaactgttcttaagtgtatagatcag
cacattcgtactgaaggactcaatgacatgagaaacaatgctgaaagtcttgcaacggac
ccagagaaatacgttcaacaacttcttatcatgttcgacaagttctcagcattggttcga
gaaggattctgtgatgatgcacgtcttctgactgctcgtgacaaagcattccgtgcagtt
gtcaacgattcctcaatattcaaaaccgaaatgatgaacaagaaaagtcgcatgttgtca
gtagagtcgaaatgcgcagagttgcttgcaaattattgtgatcttcttttgagaaaaacg
cagttgagtaagaaactgacatcagaggagattgacgagaaactgggtcaagtgctcctc
gttttgaaatatgtggagaataaagacgtcttcatgagattccaccgcgcccatctttca
cgtcgtttgattctcgaaatgagtgctgaccaggaaaaagaagaaatgatggtcaccaaa
ttgagagaatgtggaatgccatctgatgctgtgaacaagctatctagaatgcttcaggat
attgaactgaataaggacatgaacacattattcaagaaggttctgactggcactaacaac
aacaaatcgatcgcagactccatcaatctcaaggtgctcaatggaggagcgtggggccgt
ggaggctcagagagaataagattctctctaccaagagaacttgaagatttcgttccagag
atggaagcgttctacaaaaagcatcacaatggtagaaagcttaactggatgcatcattgg
agtagtggaactatggttttcggcactgcaagcggcggtcgcttcgatctggaaattact
acattccaaatggctgttcttttctgtttcaatgagagagctcatgagaaaatttcactg
gaaactctccgattggcaacagaattgcctgatgctgaacttaatcgcactcttctgtct
ctggtctcgtacccaaaaatgcgttctcaaattcttctctgcgatgtcgcatcccaaaac
attaccgctcgagacttcactgattccaccaaattctccataaatcacaacttccacttg
gtcaaaaatggaaaatctcagcaacgtggaaaagtgaacctcatcggacgactacagtta
tccttagaagcgaacgccgagaaagagcacgaaagcatcgttgcgttgagagaatatcgt
gtgcaagaaggaattgtgaagattctcaagacaagaaagaccatcacattggctcaaatg
acgatggagttagtggagattctgaaaccattgttcattccgaaccgcagaattatcaaa
gagcaaattgattggctcattgaaaacaggttcatggaacgccgtcctgatgacatcaac
acttttgtctacctcgcctaa

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