Caenorhabditis briggsae (nematode): CBG_09562
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Entry
CBG_09562 CDS
T01054
Name
(RefSeq) Protein CBG09562
KO
K13210
far upstream element-binding protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_09562
03041 Spliceosome [BR:
cbr03041
]
CBG_09562
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
CBG_09562
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CBG_09562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
FUBP_C
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
8579061
NCBI-ProteinID:
XP_045094014
WormBase:
CBG09562
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Position
V:10781217..10783421
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AA seq
568 aa
AA seq
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MTNGLPSKRLAEDPDLSLSNPFMGDNENVNEKYPIPESAVGIVIGRGGSEIQGIQAKAGC
RVQMSSDSDNSGVRQVTLEGTRANVEAAKVLINEVVARSQTPRPQYGFPRAQNTIDIAIP
PNRCGLIIGKAGETIRQLQEKSGCKMVLVQDSQTVGDQAKPLRITGDPQKIEIAKQLVAE
ILNSGPDGSGGGGHQVQHIGSGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQ
FKPDEDPNAPERCAIIMGTRDQIYRATERITELVRKSAQQQGGSMTGSAGAESSTFFMSV
PAAKCGLVIGKGGETIKQINSESGAHCELSRDATGNVEEKVFVIKGGKRQIEHAKHLIRI
KVGDIAPNTPFRDDSAMSIQPQFAAPAQGGFGAQQWNPAAATQIPGATQNPYQVAGGWQQ
NNVYAQQQAAAVAAAAAPYAAAGIVQAQPQVAAYQQPQVVQQQQPQAAAGTPVVDPVTGE
QDYSAQWMEYYKSIGALDKAEAVEAQMKKKKAEAAARAAAGSAALVQQMPMGMPMQQVAG
QPRAAQAYPAYSAAGTVAYQPQQYGQFQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacggactcccttccaaacgtctcgccgaggatcccgatttgagtctgagcaat
ccattcatgggtgacaatgaaaacgtcaatgagaagtatccgattccagaatcggctgtt
ggaatagtaattggaagaggaggctctgaaattcaaggaattcaggctaaggctggatgc
cgcgttcagatgtcttccgactcggataactccggtgtccgccaggtcactctcgaagga
acccgtgccaacgttgaggcagcaaaagtgctcattaatgaagttgttgctcgttcgcag
acaccacggccacaatatggatttccgagagcgcaaaacactatcgacatcgcaattcca
ccaaatcggtgtggattaattatcggaaaagcgggagagactatccgacagcttcaggag
aagagcggatgcaagatggttctcgttcaggatagtcaaactgttggtgatcaagccaaa
ccgctaagaattactggagatccgcaaaagattgaaattgcaaagcaactggttgctgag
attctgaacagcggcccagatggaagcggaggaggtggtcaccaggtgcaacatattggt
agtggtggagcatctgctcgtggagaagtcgttgttccgaggtcatcagttggaattatc
attggaaaacaaggagatacgatcaaacgtcttgcaatggagactggaactaaaattcag
ttcaagccagatgaagacccaaatgctccagaaagatgcgccatcattatgggaactcgc
gatcaaatctatcgtgcaactgaacgtataaccgagttggttagaaagagcgcccaacaa
caaggtggaagcatgactggatcggctggagcagaatcatcgactttcttcatgtccgtt
ccggctgccaaatgtggtcttgtcattggaaaaggaggagaaacaatcaaacagatcaat
tcggaaagtggtgctcattgtgagctgtcccgtgatgcaactggaaatgtagaagagaaa
gtgtttgtgatcaaaggaggaaagcggcagattgaacatgccaagcacttgatccgtatc
aaagtcggcgatattgctccaaacactccattccgcgatgactctgcaatgtcgattcag
ccacagtttgcagctccagctcaaggaggcttcggagcacaacaatggaatccagctgcc
gcaacacaaatcccaggagccactcagaacccgtaccaagttgctggaggatggcaacaa
aacaatgtatacgcccaacagcaagcagccgcggttgctgcggccgctgcaccatatgct
gctgctggaattgttcaggcccagcctcaagtggcagcctatcagcaaccacaggtggtt
caacagcaacaaccccaggctgccgctggcaccccagtcgtagaccctgtaaccggagaa
caagattactccgctcaatggatggagtattataagtccatcggagctcttgacaaagcc
gaagcagtagaagctcaaatgaagaagaagaaggctgaagccgcggcccgcgctgctgct
ggatcagctgcacttgttcagcagatgccaatgggtatgccaatgcaacaagtggctggt
cagccacgtgccgctcaagcttatccggcttactcggctgcaggaactgttgcctatcaa
ccacaacaatatggacagtttcaataa
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