Caenorhabditis briggsae (nematode): CBG_09607
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Entry
CBG_09607 CDS
T01054
Symbol
Cbr-pap-1
Name
(RefSeq) Protein CBR-PAP-1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CBG_09607 (Cbr-pap-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_09607 (Cbr-pap-1)
Enzymes [BR:
cbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CBG_09607 (Cbr-pap-1)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
CBG_09607 (Cbr-pap-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
8579103
NCBI-ProteinID:
XP_045094004
WormBase:
CBG09607
LinkDB
All DBs
Position
V:<10603134..>10605394
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AA seq
668 aa
AA seq
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MAASVTDRTPHLGVSQPISTLRPDQKDIVMTDQLIATLKKFNSYEPKEETEKRMEVLRSL
NRLVKEWVKKVTAIKIPSGEGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRTDF
FTSFKEMLRQDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQDLFDDQL
LRNLDQESVRSLNGCRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISW
AILVARACQLYPNASASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRK
KNSDRFHLMPIITPAFPEQNSTHNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFKE
VKFFSRYKHYIGMFFFLNCDHNLSAYLSSDHGYIHRRRGIELWRFLESRIRLLVQSLERN
QDILIAHNDTNKHRPSPNAKFDVRPENTRITIWFIGLEFAEHATNLDLTSEIQRFRTNVE
LQASGVKGIGPNSQVEIDMFYMKRTRLFSIIGAAALKKGRDWKPPKNPPPPMGQVPYRTT
VARTSSTNSVPTTPTTLVAPSTPLSEAMPSSEPDSTTNNGTPVSRKRLVQEATSTSETVT
TSTLEDVPPEKRTRDDTLEEPILEMVVEVANGVVEESREVELDKDNGHLNGSNGLEASEK
HMEVPQSV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcggtaacagacagaacgccgcatctgggtgtctcgcagcccatctcaaca
ttgaggccggatcaaaaggatatagttatgacggatcaattgattgcaactttgaaaaag
ttcaacagttatgaaccgaaagaggaaacggagaaaaggatggaagtacttcgcagtttg
aaccgtctcgtcaaagaatgggtgaagaaagtaaccgcaatcaagataccgagtggcgaa
ggagcgaatgctggtggtaaactgttcactttcggttcatatcgtctgggagtacacagt
tctggtgctgatatcgatacgctcgcagttgttccacgccacattgatcgcacagatttt
ttcacttccttcaaagaaatgctgcgccaagacccaaatgtgacggagttgcatggtgtt
gaagaggctttcgtgccagtaatgaagttaaaatactccggcgttgagcttgatattttg
ttcgcgcgactcgctcttaaagaagttccggacactcaagatcttttcgatgatcagctt
ctcagaaacttggatcaggaaagtgtcagatctctgaacggatgtcgcgtcgccgaactg
ttgctaaaacttgttccccgccagaaagaattttgcatagcgcttcgagccatcaaactc
tgggcaaagaatcacggaatttattcaaattcaatgggtttttttggaggtattagctgg
gctattcttgttgcccgagcttgccagttatatcctaatgcaagtgcatctcgaatcgtt
caccgaatgttcttcattttctccacatggacttggccacatccagttcttctaagcgca
ctagatcaagacagaaatgacattcccacgctttgtgatttgatttgggatcctcgtaag
aaaaactctgatagatttcacttgatgcccataatcactccggcctttccggaacagaat
tccacacacaacgttacacgatccacttgtcacatcatcagaaacgaaatttgtgaaggg
ttggaaatctgcaaagatatcacagagggaaaggctacgtgggaggacctattcaaggag
gtcaaattcttcagccggtacaagcattatattggtatgtttttttttctgaattgtgat
cacaatttatcagcttatttaagctctgatcatggctacatccacagaagaagaggaatt
gaactatggcggtttctcgagtctcgtattcgactcctcgtgcaaagtctcgagcgtaac
caagacattctcattgctcacaacgacaccaacaaacacagaccatcaccgaacgctaag
tttgatgtgagaccagaaaacaccagaattaccatttggttcatcggactcgaatttgct
gaacacgccacgaatcttgatttgacatctgagattcaacgattcagaacaaacgtggag
ttgcaagctagtggtgtgaagggcatcggaccaaactcccaagtagagattgacatgttc
tacatgaagaggaccagattgttcagtattatcggtgctgctgctctcaaaaaaggtcgt
gattggaaaccgccgaaaaatcccccaccaccgatgggccaagtgccttatagaacaact
gttgcgagaacttccagtactaattcggtcccaacgacgccaacgactctagttgctccg
agcacaccgctctctgaggcaatgccttcttccgagcctgattcaacaacgaataacgga
acccctgtgagccgcaaacgtcttgttcaagaagcaacatcgacttcggaaacagtgact
acttccaccttagaagatgttccaccagagaagagaacccgtgatgacactctcgaagag
ccaattcttgagatggtggtggaggtagcaaatggagtcgtcgaagagagtagagaagtc
gaattggacaaggataacggacacttgaatgggagcaatgggttggaggctagtgagaaa
catatggaggtgccacaaagtgtttga
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