KEGG   Caenorhabditis briggsae (nematode): CBG_09806
Entry
CBG_09806         CDS       T01054                                 
Symbol
Cbr-chc-1
Name
(RefSeq) Protein CBR-CHC-1
  KO
K04646  clathrin heavy chain
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04142  Lysosome
cbr04144  Endocytosis
cbr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CBG_09806 (Cbr-chc-1)
   04142 Lysosome
    CBG_09806 (Cbr-chc-1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    CBG_09806 (Cbr-chc-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbr04131]
    CBG_09806 (Cbr-chc-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbr04147]
    CBG_09806 (Cbr-chc-1)
Membrane trafficking [BR:cbr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    CBG_09806 (Cbr-chc-1)
Exosome [BR:cbr04147]
 Exosomal proteins
  Proteins found in most exosomes
   CBG_09806 (Cbr-chc-1)
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_Vps41
Other DBs
NCBI-GeneID: 8583502
NCBI-ProteinID: XP_045094118
WormBase: CBG09806
LinkDB
Position
III:8607404..8613293
AA seq 1660 aa
MAALPIKFHEHLQLPNAGIRVPNITFSNVTMESDKNIVVREMVNTVKTFLNWRSTTTGKT
LQIFNIELKAKVKAHQNVEDVVYWKWISDKLIALVSDTAVYHWSIEGDAAPVKMFDRHQS
LAGTQIINYRADAESKWLVLIGISAKDSRVVGSMQLYSTERKVSQPIEGHAASFVRFKVD
GNQQPSNLFCFSVKTETGGKLHIIEVGTPATGNSPFQKKNVDVPYTADTAGDFPVSMQVS
TKQGIIYLVTKQGYVHLYDVESGLRIYSNRISTDTVFVTCEYTATGGIMGINRKGQVLSV
SIDEANLVPFVTNQLQNPDLALKLAVRCDLPGAEELFVRKFNLLFSNGQFGEAAKVAASA
PQGILRTPATIQKFQQCPSTGSGPSPLLQFFGILLDQGKLNKYETLELCRPVLAQGRKEL
ITKWLNEQKLECCEELGDLIKPHDVNTALSVYLRGNVPHKVVQSFAETGQFDKIVMYAKR
VGFQPDYLFQLRQILRNSNPDNGAKFAQLLVSESENGEPLADLSQRLFQIIDCFMEVQAV
QPCTSFLLEVLKGDKPEEGHLQTRLLEMNLLAAPAVADAILANKMFSHYDRAAIGQLCEK
AGLLQRALEHFTDLYDIKRTVVHTHLLKPDWLVGYFGSLSVEDSLECLKAMLTQNIRQNL
QVVVQIASKYHEQLGADKLIEMFETHKSYEGLFYFLGSIVNFSQDPEVHFKYIQAATRTG
QIKEVERICRESQCYDAERVKNFLKEAKLNDQLPLIIVCDRHNMVHDLVLYLYRNQLQKY
IEVFVQKVNAARLPIVVGALLDVDCSEDAIKQLIINTRGKFDIDELVEEVEKRNRLKLLN
HWLESRIQEGATDAATHNAMAKIYIDSNNNPERFLKENPYYDSKVVGKYCEKRDPHYAFL
SYERGQCDAELINVCNENSLFKNLARYLVKRRDFTLWEQVLNEENVYRRQLIDQVVQTAL
SETQDPEDISVTVKAFMAADLPNELIELLEKIVLDNSAFSEHRNLQNLLILTAMRADRTR
VMEYIQKLDNYDAPDIANIAITSELYEEAFAIFKKFDVNSSAINVLIENVNNLDRAYEFA
EKCNQSDVWASLAKAQLKQDLVKEAVDSFIKADDPGAYMEVVNKCSQTEHWEDLVRYLQM
ARKKSRESYIETELVYALAKTGRLTELEEFIAGPNHAQIGQIGDRCFDNGMFDAAKILFN
NVSNFAKLSVTLVRLGEYQGAVDAARKANSTKTWKQVCFSCVENGEFRLAQMCGLHIVVH
ADELEELINFYQDRGHFEELIALLEAALGLERAHMGMFTELAILYSKYKPEKMREHLELF
WSRVNIPKVLRAAEQAHLWSELVFLYDKYEEYDNAALTMMQHPTESWREQHFKEVIAKVA
NVELYYKAMQFYLDFKPLLLNDLLAVLSPRLDHSRTVLFFNKLKQIPLVKPYLRQVQNLN
NKAINEALNQLLIDEEDHAGLRSSIEAQDNFDNISLAQQLEKHPLVEFRRISAYLFKGNN
RWKQSIELCKKDKLYKDAMEYAAESRNGELAEELLSFFLDEKLYDCFAASLYHCYDLLHP
DVIMELAWKHKIMDYAMPYMIQVMRDYQTRLEKLERSEHERKEEKAEQQQNNKMTMEPQL
MLTYGAPAPQMGYPGAPAGYGGQPAYGQPGQPGFNAPGFM
NT seq 4983 nt   +upstreamnt  +downstreamnt
atggcggctctccctattaaatttcatgagcatctgcagctccccaatgctggaattcgg
gttcccaacatcacattctccaatgtcaccatggaatctgacaaaaacattgtcgttcgt
gaaatggtaaacacagttaaaaccttcctgaattggagatcaacaacaactggcaagact
cttcaaattttcaacattgaattgaaagcaaaagtgaaagcccaccagaatgtggaagat
gtagtttattggaaatggattagtgataagttgatcgctctcgtttccgacacagcagtc
tatcattggtcaatcgaaggagatgcagctccagttaagatgttcgacagacatcagtct
ttggccggtactcaaatcataaactaccgtgccgatgccgaaagcaaatggctcgttctt
attggtatctccgccaaagattcccgtgttgttggaagcatgcaattgtacagtacagaa
agaaaggtgtcgcagccaattgaaggtcatgccgccagtttcgtccgattcaaggttgac
ggaaatcaacaaccatccaacttgttctgcttctccgtgaaaacagaaaccggaggtaaa
cttcacatcattgaagtcggaacccccgccactggaaattcacctttccaaaagaagaat
gttgatgttccatacacagctgatactgcgggcgatttcccagtttctatgcaggtttca
accaagcaaggaatcatctacttggtgacgaagcagggttacgtccatctttacgatgtg
gaatctggattgcgcatctactcaaatcgtatctcgactgatacagttttcgtcacttgc
gagtacacagccactggaggaattatgggaatcaacagaaaaggacaagttctctcagtt
tcgattgatgaggctaacctggttcctttcgtcaccaaccaacttcaaaacccagatttg
gcgttgaagctagctgttcgatgtgaccttcctggtgcagaggagttgttcgtccgtaaa
ttcaatttgctgttcagcaacggtcaatttggtgaagctgctaaagttgccgcttccgca
cctcaaggaattctccgaactccagccactatccaaaaattccaacagtgcccatccacc
ggatctggtccttcgcctcttcttcaatttttcggtattcttctggatcaaggaaagctg
aacaagtacgaaaccttggagttgtgccgtcctgttttggctcaaggaagaaaagaactg
atcaccaagtggctcaatgagcagaagcttgaatgctgcgaagagttaggagatctcatc
aagccacacgatgtcaacactgctttatctgtctatctgcgcggaaatgtaccacacaaa
gttgttcaatccttcgctgagacaggacaatttgacaagattgtgatgtatgcaaagcgc
gtcggattccagccagactacttgttccaactccgacaaattcttcgcaactcgaatcca
gataacggagctaagttcgctcaacttcttgtttctgagagtgagaatggagagcctctc
gctgatttgtctcagcgattatttcagatcatcgactgcttcatggaagttcaagccgtt
cagccatgcacctccttcttgcttgaagttttgaaaggagacaagccagaggaaggacat
cttcaaacacgacttttggagatgaatcttcttgctgctccagctgttgctgatgctatt
ttggccaacaagatgttctctcattatgatcgtgccgctatcggtcaactctgcgagaag
gctggtcttctgcaaagggctctcgagcatttcactgacctttatgacatcaagagaact
gtcgttcatactcatttgctcaaaccagattggctcgttggatactttggaagtctctcc
gtagaagattcattggaatgcctaaaagccatgctcactcaaaacattcgccaaaacctt
caagtcgtcgttcaaatcgcttctaagtaccacgaacaacttggagctgataagctgatt
gagatgttcgagactcacaagtcatacgaaggtctcttctatttcctcgggtccatcgtc
aacttcagccaagatccagaggttcacttcaagtacatccaggctgccactcgtactgga
cagattaaagaagtcgagcgaatctgcagagaatctcaatgctacgatgcggaacgagtc
aagaacttcctcaaggaagctaagctcaacgatcaactcccactgatcattgtttgtgac
cgtcacaatatggtccatgacttggttctctacttgtacagaaaccaactacagaagtac
atcgaagtcttcgttcaaaaggtaaatgctgcccgactcccaattgttgtcggagctctt
cttgacgtcgactgcagcgaagatgccatcaagcagctcatcatcaacacccgaggaaag
ttcgatattgatgaactcgtcgaagaagttgagaaacgtaaccgactaaagctcttgaac
cattggcttgaatcgagaatccaggagggagctactgatgctgccactcacaatgccatg
gccaagatctacatcgactcgaacaacaaccccgaacgattcctgaaggagaatccgtac
tacgacagtaaggttgtcggaaaatactgcgagaagcgtgatccccactacgcattcctt
tcatacgaacgaggacagtgtgatgctgagcttattaatgtgtgcaacgaaaactctctg
ttcaagaacttggctagatatttggttaagagaagagatttcactctctgggaacaagtt
ctcaacgaggagaatgtctacagaagacagttgattgatcaagtcgttcaaactgctctg
tccgaaacccaagacccagaagacatttcggtgactgttaaagcttttatggctgccgat
ttgccgaacgagctcattgagcttttggagaagatcgttctcgataactctgcattctct
gagcaccgaaatcttcaaaatctgctcatcttgactgccatgagagctgacagaacccgt
gtcatggagtatattcaaaagctggataactatgatgctccagacatcgccaacatcgcc
attacttcagagctttacgaggaagcctttgctattttcaagaagtttgatgtcaactca
agtgccatcaatgttctcattgagaatgttaacaatttggacagagcttacgaattcgct
gagaagtgtaatcaatcagatgtgtgggcatcacttgccaaggctcaactcaaacaagat
cttgtgaaggaagctgttgattcattcatcaaggcagacgatccaggagcgtacatggag
gttgtcaacaaatgctctcaaacggaacactgggaagatcttgtccgctatcttcagatg
gctcgcaagaagagccgcgagtcatacatcgagaccgaattagtttatgccctcgcaaaa
accggacgtctcactgagttggaagagtttattgccggaccaaatcatgctcaaattggt
cagattggtgaccgttgttttgataacggaatgttcgacgctgctaagatcctcttcaac
aacgtttcgaactttgccaagctttctgttacacttgttcgtttgggagaataccaagga
gctgttgacgctgctcgcaaggccaatagcactaagacctggaaacaagtttgcttctcg
tgtgtggagaacggagagttccgtcttgctcaaatgtgtgggcttcatattgttgttcat
gctgatgagctcgaagaattgatcaatttctaccaagatcgtggacactttgaagaactc
attgctcttcttgaagctgccttgggactggaacgcgcccacatgggaatgttcaccgag
cttgctatcctctactcaaaatacaagccagagaagatgcgcgagcatttggaattgttc
tggagccgtgtcaacattccaaaggttctccgtgctgctgagcaagcccatctctggtct
gaattggtattcttgtatgataagtacgaggagtacgacaatgctgctttgaccatgatg
caacatccaacggaatcatggagagagcaacacttcaaggaagtcatcgccaaggtggcc
aatgtagagctctactacaaagctatgcaattctacttggacttcaagccacttctcctc
aatgatctccttgctgttctctccccaagattggatcattctcgcactgttctcttcttc
aacaagctcaagcaaattcctctcgtcaagccatacctcagacaagtccaaaacttgaac
aacaaggctatcaacgaagctttgaaccaattgctgattgacgaggaagaccatgccgga
cttcgttcttccattgaggctcaagacaatttcgacaacatctcccttgctcaacaactc
gagaaacacccacttgtcgagttcagaagaatttcagcttacttgttcaagggaaacaac
cggtggaagcaatccatcgagctttgcaagaaagacaagttgtacaaagatgctatggaa
tatgctgcagaatcgagaaatggagagcttgcggaagagcttctttccttcttcctcgat
gaaaaactttatgactgctttgccgcctcgctttatcattgctacgacctcctccaccct
gatgtcatcatggagctcgcctggaaacacaaaatcatggactacgccatgccatacatg
atccaagtgatgagagattatcagaccagactggagaaattggaacgttctgaacatgag
cgaaaagaggaaaaggctgagcagcaacagaacaataaaatgacgatggagccacagctt
atgcttacgtatggtgctcctgctccacagatgggctaccctggcgctccggctgggtac
ggaggacaacctgcttacggtcagcctggtcaaccaggatttaatgcccctggatttatg
taa

DBGET integrated database retrieval system