Caenorhabditis briggsae (nematode): CBG_09806
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Entry
CBG_09806 CDS
T01054
Symbol
Cbr-chc-1
Name
(RefSeq) Protein CBR-CHC-1
KO
K04646
clathrin heavy chain
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04142
Lysosome
cbr04144
Endocytosis
cbr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CBG_09806 (Cbr-chc-1)
04142 Lysosome
CBG_09806 (Cbr-chc-1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
CBG_09806 (Cbr-chc-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_09806 (Cbr-chc-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_09806 (Cbr-chc-1)
Membrane trafficking [BR:
cbr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
CBG_09806 (Cbr-chc-1)
Exosome [BR:
cbr04147
]
Exosomal proteins
Proteins found in most exosomes
CBG_09806 (Cbr-chc-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
8583502
NCBI-ProteinID:
XP_045094118
WormBase:
CBG09806
LinkDB
All DBs
Position
III:8607404..8613293
Genome browser
AA seq
1660 aa
AA seq
DB search
MAALPIKFHEHLQLPNAGIRVPNITFSNVTMESDKNIVVREMVNTVKTFLNWRSTTTGKT
LQIFNIELKAKVKAHQNVEDVVYWKWISDKLIALVSDTAVYHWSIEGDAAPVKMFDRHQS
LAGTQIINYRADAESKWLVLIGISAKDSRVVGSMQLYSTERKVSQPIEGHAASFVRFKVD
GNQQPSNLFCFSVKTETGGKLHIIEVGTPATGNSPFQKKNVDVPYTADTAGDFPVSMQVS
TKQGIIYLVTKQGYVHLYDVESGLRIYSNRISTDTVFVTCEYTATGGIMGINRKGQVLSV
SIDEANLVPFVTNQLQNPDLALKLAVRCDLPGAEELFVRKFNLLFSNGQFGEAAKVAASA
PQGILRTPATIQKFQQCPSTGSGPSPLLQFFGILLDQGKLNKYETLELCRPVLAQGRKEL
ITKWLNEQKLECCEELGDLIKPHDVNTALSVYLRGNVPHKVVQSFAETGQFDKIVMYAKR
VGFQPDYLFQLRQILRNSNPDNGAKFAQLLVSESENGEPLADLSQRLFQIIDCFMEVQAV
QPCTSFLLEVLKGDKPEEGHLQTRLLEMNLLAAPAVADAILANKMFSHYDRAAIGQLCEK
AGLLQRALEHFTDLYDIKRTVVHTHLLKPDWLVGYFGSLSVEDSLECLKAMLTQNIRQNL
QVVVQIASKYHEQLGADKLIEMFETHKSYEGLFYFLGSIVNFSQDPEVHFKYIQAATRTG
QIKEVERICRESQCYDAERVKNFLKEAKLNDQLPLIIVCDRHNMVHDLVLYLYRNQLQKY
IEVFVQKVNAARLPIVVGALLDVDCSEDAIKQLIINTRGKFDIDELVEEVEKRNRLKLLN
HWLESRIQEGATDAATHNAMAKIYIDSNNNPERFLKENPYYDSKVVGKYCEKRDPHYAFL
SYERGQCDAELINVCNENSLFKNLARYLVKRRDFTLWEQVLNEENVYRRQLIDQVVQTAL
SETQDPEDISVTVKAFMAADLPNELIELLEKIVLDNSAFSEHRNLQNLLILTAMRADRTR
VMEYIQKLDNYDAPDIANIAITSELYEEAFAIFKKFDVNSSAINVLIENVNNLDRAYEFA
EKCNQSDVWASLAKAQLKQDLVKEAVDSFIKADDPGAYMEVVNKCSQTEHWEDLVRYLQM
ARKKSRESYIETELVYALAKTGRLTELEEFIAGPNHAQIGQIGDRCFDNGMFDAAKILFN
NVSNFAKLSVTLVRLGEYQGAVDAARKANSTKTWKQVCFSCVENGEFRLAQMCGLHIVVH
ADELEELINFYQDRGHFEELIALLEAALGLERAHMGMFTELAILYSKYKPEKMREHLELF
WSRVNIPKVLRAAEQAHLWSELVFLYDKYEEYDNAALTMMQHPTESWREQHFKEVIAKVA
NVELYYKAMQFYLDFKPLLLNDLLAVLSPRLDHSRTVLFFNKLKQIPLVKPYLRQVQNLN
NKAINEALNQLLIDEEDHAGLRSSIEAQDNFDNISLAQQLEKHPLVEFRRISAYLFKGNN
RWKQSIELCKKDKLYKDAMEYAAESRNGELAEELLSFFLDEKLYDCFAASLYHCYDLLHP
DVIMELAWKHKIMDYAMPYMIQVMRDYQTRLEKLERSEHERKEEKAEQQQNNKMTMEPQL
MLTYGAPAPQMGYPGAPAGYGGQPAYGQPGQPGFNAPGFM
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctccctattaaatttcatgagcatctgcagctccccaatgctggaattcgg
gttcccaacatcacattctccaatgtcaccatggaatctgacaaaaacattgtcgttcgt
gaaatggtaaacacagttaaaaccttcctgaattggagatcaacaacaactggcaagact
cttcaaattttcaacattgaattgaaagcaaaagtgaaagcccaccagaatgtggaagat
gtagtttattggaaatggattagtgataagttgatcgctctcgtttccgacacagcagtc
tatcattggtcaatcgaaggagatgcagctccagttaagatgttcgacagacatcagtct
ttggccggtactcaaatcataaactaccgtgccgatgccgaaagcaaatggctcgttctt
attggtatctccgccaaagattcccgtgttgttggaagcatgcaattgtacagtacagaa
agaaaggtgtcgcagccaattgaaggtcatgccgccagtttcgtccgattcaaggttgac
ggaaatcaacaaccatccaacttgttctgcttctccgtgaaaacagaaaccggaggtaaa
cttcacatcattgaagtcggaacccccgccactggaaattcacctttccaaaagaagaat
gttgatgttccatacacagctgatactgcgggcgatttcccagtttctatgcaggtttca
accaagcaaggaatcatctacttggtgacgaagcagggttacgtccatctttacgatgtg
gaatctggattgcgcatctactcaaatcgtatctcgactgatacagttttcgtcacttgc
gagtacacagccactggaggaattatgggaatcaacagaaaaggacaagttctctcagtt
tcgattgatgaggctaacctggttcctttcgtcaccaaccaacttcaaaacccagatttg
gcgttgaagctagctgttcgatgtgaccttcctggtgcagaggagttgttcgtccgtaaa
ttcaatttgctgttcagcaacggtcaatttggtgaagctgctaaagttgccgcttccgca
cctcaaggaattctccgaactccagccactatccaaaaattccaacagtgcccatccacc
ggatctggtccttcgcctcttcttcaatttttcggtattcttctggatcaaggaaagctg
aacaagtacgaaaccttggagttgtgccgtcctgttttggctcaaggaagaaaagaactg
atcaccaagtggctcaatgagcagaagcttgaatgctgcgaagagttaggagatctcatc
aagccacacgatgtcaacactgctttatctgtctatctgcgcggaaatgtaccacacaaa
gttgttcaatccttcgctgagacaggacaatttgacaagattgtgatgtatgcaaagcgc
gtcggattccagccagactacttgttccaactccgacaaattcttcgcaactcgaatcca
gataacggagctaagttcgctcaacttcttgtttctgagagtgagaatggagagcctctc
gctgatttgtctcagcgattatttcagatcatcgactgcttcatggaagttcaagccgtt
cagccatgcacctccttcttgcttgaagttttgaaaggagacaagccagaggaaggacat
cttcaaacacgacttttggagatgaatcttcttgctgctccagctgttgctgatgctatt
ttggccaacaagatgttctctcattatgatcgtgccgctatcggtcaactctgcgagaag
gctggtcttctgcaaagggctctcgagcatttcactgacctttatgacatcaagagaact
gtcgttcatactcatttgctcaaaccagattggctcgttggatactttggaagtctctcc
gtagaagattcattggaatgcctaaaagccatgctcactcaaaacattcgccaaaacctt
caagtcgtcgttcaaatcgcttctaagtaccacgaacaacttggagctgataagctgatt
gagatgttcgagactcacaagtcatacgaaggtctcttctatttcctcgggtccatcgtc
aacttcagccaagatccagaggttcacttcaagtacatccaggctgccactcgtactgga
cagattaaagaagtcgagcgaatctgcagagaatctcaatgctacgatgcggaacgagtc
aagaacttcctcaaggaagctaagctcaacgatcaactcccactgatcattgtttgtgac
cgtcacaatatggtccatgacttggttctctacttgtacagaaaccaactacagaagtac
atcgaagtcttcgttcaaaaggtaaatgctgcccgactcccaattgttgtcggagctctt
cttgacgtcgactgcagcgaagatgccatcaagcagctcatcatcaacacccgaggaaag
ttcgatattgatgaactcgtcgaagaagttgagaaacgtaaccgactaaagctcttgaac
cattggcttgaatcgagaatccaggagggagctactgatgctgccactcacaatgccatg
gccaagatctacatcgactcgaacaacaaccccgaacgattcctgaaggagaatccgtac
tacgacagtaaggttgtcggaaaatactgcgagaagcgtgatccccactacgcattcctt
tcatacgaacgaggacagtgtgatgctgagcttattaatgtgtgcaacgaaaactctctg
ttcaagaacttggctagatatttggttaagagaagagatttcactctctgggaacaagtt
ctcaacgaggagaatgtctacagaagacagttgattgatcaagtcgttcaaactgctctg
tccgaaacccaagacccagaagacatttcggtgactgttaaagcttttatggctgccgat
ttgccgaacgagctcattgagcttttggagaagatcgttctcgataactctgcattctct
gagcaccgaaatcttcaaaatctgctcatcttgactgccatgagagctgacagaacccgt
gtcatggagtatattcaaaagctggataactatgatgctccagacatcgccaacatcgcc
attacttcagagctttacgaggaagcctttgctattttcaagaagtttgatgtcaactca
agtgccatcaatgttctcattgagaatgttaacaatttggacagagcttacgaattcgct
gagaagtgtaatcaatcagatgtgtgggcatcacttgccaaggctcaactcaaacaagat
cttgtgaaggaagctgttgattcattcatcaaggcagacgatccaggagcgtacatggag
gttgtcaacaaatgctctcaaacggaacactgggaagatcttgtccgctatcttcagatg
gctcgcaagaagagccgcgagtcatacatcgagaccgaattagtttatgccctcgcaaaa
accggacgtctcactgagttggaagagtttattgccggaccaaatcatgctcaaattggt
cagattggtgaccgttgttttgataacggaatgttcgacgctgctaagatcctcttcaac
aacgtttcgaactttgccaagctttctgttacacttgttcgtttgggagaataccaagga
gctgttgacgctgctcgcaaggccaatagcactaagacctggaaacaagtttgcttctcg
tgtgtggagaacggagagttccgtcttgctcaaatgtgtgggcttcatattgttgttcat
gctgatgagctcgaagaattgatcaatttctaccaagatcgtggacactttgaagaactc
attgctcttcttgaagctgccttgggactggaacgcgcccacatgggaatgttcaccgag
cttgctatcctctactcaaaatacaagccagagaagatgcgcgagcatttggaattgttc
tggagccgtgtcaacattccaaaggttctccgtgctgctgagcaagcccatctctggtct
gaattggtattcttgtatgataagtacgaggagtacgacaatgctgctttgaccatgatg
caacatccaacggaatcatggagagagcaacacttcaaggaagtcatcgccaaggtggcc
aatgtagagctctactacaaagctatgcaattctacttggacttcaagccacttctcctc
aatgatctccttgctgttctctccccaagattggatcattctcgcactgttctcttcttc
aacaagctcaagcaaattcctctcgtcaagccatacctcagacaagtccaaaacttgaac
aacaaggctatcaacgaagctttgaaccaattgctgattgacgaggaagaccatgccgga
cttcgttcttccattgaggctcaagacaatttcgacaacatctcccttgctcaacaactc
gagaaacacccacttgtcgagttcagaagaatttcagcttacttgttcaagggaaacaac
cggtggaagcaatccatcgagctttgcaagaaagacaagttgtacaaagatgctatggaa
tatgctgcagaatcgagaaatggagagcttgcggaagagcttctttccttcttcctcgat
gaaaaactttatgactgctttgccgcctcgctttatcattgctacgacctcctccaccct
gatgtcatcatggagctcgcctggaaacacaaaatcatggactacgccatgccatacatg
atccaagtgatgagagattatcagaccagactggagaaattggaacgttctgaacatgag
cgaaaagaggaaaaggctgagcagcaacagaacaataaaatgacgatggagccacagctt
atgcttacgtatggtgctcctgctccacagatgggctaccctggcgctccggctgggtac
ggaggacaacctgcttacggtcagcctggtcaaccaggatttaatgcccctggatttatg
taa
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integrated database retrieval system