Caenorhabditis briggsae (nematode): CBG_09815
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Entry
CBG_09815 CDS
T01054
Symbol
Cbr-swsn-3
Name
(RefSeq) Protein CBR-SWSN-3
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CBG_09815 (Cbr-swsn-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_09815 (Cbr-swsn-3)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_09815 (Cbr-swsn-3)
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CBG_09815 (Cbr-swsn-3)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CBG_09815 (Cbr-swsn-3)
PBAF complex
CBG_09815 (Cbr-swsn-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Flagellin_C
FapA
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
8583510
NCBI-ProteinID:
XP_002641519
WormBase:
CBG09815
LinkDB
All DBs
Position
III:complement(8640191..8641118)
Genome browser
AA seq
252 aa
AA seq
DB search
MSSRGPKVPERPLQPYMRYSRKMWPKVRAENPDAQLWDIGKIVGKMWLETTDAEKSFFQH
EYEMEKADYDKQMKNFQGNGMSNYMMSKSRAKNNEKMSRSRMDPGGVVIQPVDEDDGGNE
MSTRRLAGVRFERNNRLISDLFSPSIVTDTRNIVPHHRMEMLKRQAASLGTHQSKLEEEL
TKLERAHDNRKRSIEKGSDDFQEQLKKVVSEKPVVDEEKFEQTVKEWEEKLAAAYEEYKK
NKTDSATHNGKP
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccgtggtcctaaagtaccagagagaccactacaaccgtacatgcgatacagt
cgtaagatgtggccaaaagttagagccgaaaatccggatgcgcagctttgggatatagga
aagattgttgggaagatgtggcttgaaaccaccgatgcggaaaaatcattctttcaacat
gaatacgaaatggagaaggcagattacgacaagcaaatgaagaactttcaaggcaatgga
atgtcgaattacatgatgagcaagagtcgagccaaaaacaacgaaaaaatgtcaagaagt
cgcatggaccccggaggtgttgtgattcaaccagtggacgaggacgacgggggaaatgaa
atgagtaccaggcgtttggccggagtgagatttgaacggaacaaccggcttattagtgat
cttttctctccaagtatcgtaactgataccagaaatattgttcctcatcatcgcatggaa
atgctgaaacgtcaagccgcttctctgggaacccaccagagcaagcttgaagaagaactg
acgaaactcgagagagctcacgacaatagaaaaagatctatcgagaagggaagcgacgat
tttcaagaacaactgaaaaaagtagtcagcgagaagccggttgtcgatgaggagaagttt
gagcagactgtcaaagaatgggaagagaaactggcggctgcctacgaagagtacaaaaag
aacaagacagactcggcgacacataacggtaagccgtga
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integrated database retrieval system