Caenorhabditis briggsae (nematode): CBG_09873
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Entry
CBG_09873 CDS
T01054
Symbol
Cbr-swsn-2.1
Name
(RefSeq) Protein CBR-SWSN-2.1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CBG_09873 (Cbr-swsn-2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_09873 (Cbr-swsn-2.1)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_09873 (Cbr-swsn-2.1)
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CBG_09873 (Cbr-swsn-2.1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CBG_09873 (Cbr-swsn-2.1)
PBAF complex
CBG_09873 (Cbr-swsn-2.1)
GBAF(ncBAF) complex
CBG_09873 (Cbr-swsn-2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
8583563
NCBI-ProteinID:
XP_045094136
WormBase:
CBG09873
LinkDB
All DBs
Position
III:8887081..8888982
Genome browser
AA seq
458 aa
AA seq
DB search
MQSQQRPPASQGSRYGHPGTPQQVRRQANAPLPGQTAQLQNNRGPQPPKKKKRYADKLIQ
PKVRELVPESQAYMDLLAFEQKLDSTITRKKIDVQEALKRPQKIKKRLRIYISHTFIAGK
EPEKEGDEASVPMWELRVEGRLLDDMLQQLQQQQQPGGAAAAASANPRAPPKRKFSSFFK
SLVIELDKDIYGPDNHLVEWHRTPQTNETDGFQVKRPGDRPVKCTILLLLDYQPMKFKLH
PRLAKVLGIAAETRPRIIEALWQYIKTHKLQDPQDRDTINNDLFLEQCFGVKKMRFMEIP
QRLHQLLQQPDPLILNHIIQRPEDGQDKTSACYDIDVELEDPVKQQMASFVHNQNNANDI
QVLDRKIYDLVDQINEMKLRRDFFLRFSNEPSGFIKKWVVSQNTDLKTLTESNGDGEADR
HANTYTTNDADEGVSRYMYQKVQQKRAELEQSLGIRNN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctcaacagcggccaccagcctcgcaagggtcgagatatggccatccgggaact
ccgcagcaagttcgtcgacaagccaatgctccgttaccaggacaaactgctcaattgcaa
aacaatcgtggtcctcaaccgccaaaaaagaagaaacgatacgccgataaattaattcaa
cctaaagtccgtgagttggttccggagtctcaagcttatatggacttgctagctttcgag
caaaagttggactcaacaatcacaagaaagaaaatagatgttcaagaagcgttgaagagg
ccgcagaaaataaagaaacgtctccgaatctacatttcgcataccttcattgccggaaaa
gagccggagaaagaaggcgatgaagcttcagttccaatgtgggagcttcgtgtcgaagga
cgtcttctagacgatatgttgcaacaacttcaacaacaacaacaacctggaggagcagct
gcggctgcgagtgctaacccaagagctccaccgaagcgaaagttcagttcattcttcaag
agcctggtaattgaactggataaagacatttatggtccggataatcatcttgtcgagtgg
catcgtactccacaaaccaacgaaactgatggattccaagtgaaacggccaggagatcgt
cctgtcaaatgcaccattcttcttcttcttgactaccaaccaatgaagttcaaacttcat
ccacgacttgcaaaagttctcggaatcgccgctgagactcgcccacgaatcattgaagct
ctctggcaatacatcaaaacgcacaagcttcaggatccacaagatcgggatactataaac
aatgatttgttcttggaacaatgcttcggtgtaaaaaagatgagattcatggaaatccca
caacgtcttcatcagcttctacaacaacctgatccactcatattgaatcatattattcaa
agaccggaagatggtcaagacaagacatctgcctgctatgacattgatgttgagctcgag
gatccggtgaaacagcaaatggcaagtttcgtgcacaatcaaaacaatgccaacgatatc
caagttctcgatcgaaaaatatatgatctggttgaccagatcaacgaaatgaaactccgt
cgtgacttcttccttcgattctcaaacgaacccagcggattcataaagaaatgggttgtc
agccagaacaccgacttaaaaactctgaccgaatcaaatggtgatggagaagccgatcgt
catgccaacacatacaccactaatgatgcggacgaaggagtttccagatacatgtaccaa
aaagttcaacaaaaacgagccgaattggagcaaagcttgggaatccggaacaattaa
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