Caenorhabditis briggsae (nematode): CBG_09948
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Entry
CBG_09948 CDS
T01054
Symbol
Cbr-cyld-1
Name
(RefSeq) Protein CBR-CYLD-1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbr01002
]
CBG_09948 (Cbr-cyld-1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_09948 (Cbr-cyld-1)
Enzymes [BR:
cbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
CBG_09948 (Cbr-cyld-1)
Peptidases and inhibitors [BR:
cbr01002
]
Cysteine peptidases
Family C67
CBG_09948 (Cbr-cyld-1)
Ubiquitin system [BR:
cbr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
CBG_09948 (Cbr-cyld-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
8583618
NCBI-ProteinID:
XP_045094155
WormBase:
CBG09948
LinkDB
All DBs
Position
III:<9135578..>9143833
Genome browser
AA seq
1175 aa
AA seq
DB search
MPGEFESVPELSAGSHQFRNLLDDFMGPTQLRNSFNDLNNHGFEFLGQSNTNSSSSSNVR
YTNSKNRESYLVSRFTKIIASSLLFQDQNIPVGNLLDGFDFIEKPSVPYKETLVDVSDSR
TKLDRDLNEEGLIVALLQRKINGLYFKKSHEEYEEPRVFEIPAGTMVREMADDDWKIPEL
NEWYSKNRLNRIQERIATPMEIQELDCNPRICSMVTRTDVMRISQDQAIHLLSVKPENRL
ELYHNIERFNFIVNLRVGNRVEVDVDDTMRRVPAKVSWIGERQQEPGIWYNVDFDTNASQ
WPSNSYSSHDRLNRHFDTNWNLDMSGSSSVAASNSRLYYSPNQMHMPMKGGGVSALYDNR
RLVHYNGAEESYRNSAYPKPPPSQERIIPVTRQQAEFERPSRAMRPPEPDYNTYSNHHHP
LPPAPPVAPRTSHSSSLNSYVGQPSRSKSVHTMQRNLYHRQHIAEQNEPVESDQLGFRVE
DQCIWNNNGVEERGIIKFIGFLKGHKTLYAGVEFKNQIGAGTGVFNKEQLFHSKDGHAGF
VELSTLESTSSTSSSSSSSAQHRRRLSSSRSQQMPAASGTSISVPVNVRHNINGKQASSE
SLSDPPPPPYAPPSPPRASSAAAAHQQPPPLPPKPIAHVEDYLIESYDIGSHVVVAHLGA
QRNGVVRWLGNEVDEQGERLVRSAIVQLDDDVPTAWRRSNEAITYCGSPVTGGVLVPVQA
LRHNRAASSSSGHSVPMSSNYPTSHNTINRRTEEFGSMDSGVEKHHCGPAKDIQQLVGRQ
KGIQGYCNSCYLDATLYAMFVQSTFFDFLLEKSIKGNEKASQFQKILAQEIVFPLRKVHY
VRADHVMKLRKLLAELMPHVTGLTNEEKDPEEILGFIFSEIFHAEPFIKLIGQNRAKDSQ
YLVPIVVDDWQGGAATSQHLLERHMRSAQVTFAKSPPVLIMQLPRYGQQKVFDKILPLET
IDITPFVAGAVPACTSCGACSEVYCPTCFLTRRVFYSEIIFCRKCFHHSHLLPEIQDHQS
RDLFPPAKPVKKPHSHKMVLSAVLCIETSHYVAYVRSSTNQWIFFDSMADREGLSDGFNV
PVARECGNMSDWLSLQGWNRLKDADETGQIKVIGVFFLFSQVIIDFFQAMFGKAALDPLV
GRLLSDSYICFYEDASATCPSSSSNLISTFKNMMN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtgaatttgaaagtgtaccggagctgtcagcgggctctcatcaatttcgcaat
ctgttggacgacttcatggggccaactcaactcagaaatagtttcaatgacctgaataat
cacggtttcgagtttctgggacaatccaatacaaattcaagttcaagttcaaatgttaga
tatacaaatagtaaaaaccgagaatcataccttgtgagtcgttttacaaagattattgct
tcaagcttactgttccaggatcaaaatataccggtcggaaatttgttagacggattcgat
ttcatagaaaagccttccgtgccttataaggaaactctagtggatgttagcgacagtagg
acaaagctagatcgagatctgaatgaagagggattaatagtggcacttcttcaaaggaaa
atcaatggtctttatttcaaaaagagccacgaggagtatgaagagccgagagtttttgaa
attccagctggaacaatggttcgagaaatggctgatgacgactggaagatacccgaactg
aacgaatggtactcgaaaaataggttgaatcgtatacaagaaagaatagctacaccaatg
gagattcaggaactcgattgtaatccaaggatatgttccatggtgacaaggacggatgtg
atgcgaataagtcaggatcaggcaatacatcttctgtctgtgaagcctgagaatcgactg
gaactataccacaatatcgaaagattcaattttattgttaacctgagagttggaaaccga
gtggaagttgatgtcgacgacacaatgcgcagagttccagcaaaagtctcatggatcgga
gagagacaacaagaaccgggaatatggtacaacgtcgacttcgacacgaacgcttctcag
tggccatcaaattcatactcatctcatgaccggttaaatcgacactttgacacaaattgg
aacttagacatgtctggatcgtcatcggtggcagcttcgaattcacgtctctattactct
cccaaccaaatgcacatgccgatgaaaggcggcggagtgtcagcactctacgataataga
cgactggtgcattataacggagcagaggaaagctaccgaaattctgcttatccaaaacca
ccaccctcacaggaaagaataattccggtgacgaggcaacaagcggaatttgaacgacct
agcagagcgatgagacctccggagccggactacaatacatattcaaatcatcatcaccca
cttccaccagcaccaccagtggcacctcgtacatctcactcctccagcttgaattcatac
gtaggacagcctagtcggagtaaaagtgttcacacaatgcaaagaaacttatatcataga
caacacatagcagagcaaaatgaacctgtggaaagtgatcagctgggtttccgagttgag
gatcaatgtatttggaacaataatggagtagaagaacgaggaataatcaagttcattgga
tttttgaaaggacacaaaacgctatatgctggtgttgaatttaaaaatcaaattggagca
ggaactggagttttcaacaaggaacaactattccattcaaaagacggacatgctggattc
gttgaactctcaacactcgagtcaacgtcttccacttcatcaagttcttcttcttctgca
caacatcgacgtcgtctttcttcttcgcggagtcaacagatgcctgctgcgtctgggaca
tcaatcagcgttccagtcaatgtgcggcacaacattaatgggaaacaagcttcgtcagaa
tctctttctgatccaccaccaccaccatacgccccaccatcgccgccacgagcttcttct
gcagctgctgctcatcagcaaccaccacctcttccaccaaagccgatcgcacacgtagaa
gattatctgattgaatcgtatgatattggcagtcatgtggtagtcgcacatctcggagct
caacgtaatggggttgttcggtggttggggaacgaagttgacgagcaaggagaacgattg
gttcgatcggcgatcgtccaactcgacgatgacgttcccactgcttggagaagaagtaac
gaagcaataacatattgtggaagtccggtgacaggaggagttctcgttccggtgcaagct
ttaagacacaacagagcagcatcttcatccagtggacattctgttccaatgtcttctaat
tatccaacaagtcacaatacaataaacagaagaacggaggaatttggaagtatggattct
ggggtagagaaacatcattgtgggccggcgaaagatattcaacaactggtcggaaggcaa
aaaggaattcagggatactgtaattcttgctacctggatgcgacattatatgcgatgttt
gtacaaagcactttcttcgatttcctcctcgaaaaatcaatcaaaggaaatgagaaagct
tcccagtttcagaaaattttggctcaagaaattgtattcccactgagaaaagtgcattat
gtgagagctgaccatgtgatgaagcttcgaaagctgctcgccgaacttatgccacatgtc
acaggattgacgaatgaagaaaaagacccagaagagatattgggattcattttctcagag
attttccatgcggagccattcatcaaactaattggacagaatcgtgcgaaggattctcaa
tatcttgttccgattgttgtggacgattggcaaggaggggctgcaacatcccagcatcta
cttgaaagacatatgcgttctgctcaagtaactttcgcaaaatcacctccagttctgata
atgcaacttccgagatatggacaacaaaaagtattcgataagattctacctcttgagacc
atcgatatcactccgtttgttgctggagctgttcctgcctgtacaagttgtggggcatgc
tcggaagtttattgtccaacgtgttttttgactagaagagtattctattcggaaatcatc
ttctgtcggaagtgtttccatcactctcatctcttgccagaaatccaagaccatcagagc
cgtgacctattcccaccagccaaaccagtcaagaagccacattcgcacaaaatggtccta
tcagcagtactttgcattgaaacatctcactatgttgcatacgtacgatcatctacaaat
caatggattttcttcgattcgatggctgatcgagaaggattatcggatggatttaatgtt
ccagttgccagagaatgtggaaatatgtcagattggttatctctacaaggatggaatcgg
ttgaaggatgcagatgaaacagggcagattaaggtgattggagttttttttctattttca
caagtaattatcgactttttccaggcaatgttcggaaaggcagcattggatccgctggtc
ggacgccttctctcggacagctacatatgtttctacgaagatgcttctgcaacctgtcca
tcctcatcttcgaatttgattagtacttttaagaatatgatgaattag
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