Caenorhabditis briggsae (nematode): CBG_10002
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Entry
CBG_10002 CDS
T01054
Name
(RefSeq) Protein CBG10002
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_10002
Membrane trafficking [BR:
cbr04131
]
Protein recycling
Others
EARP complex
CBG_10002
Endosome - Golgi transport
Tethering complex
GARP complex
CBG_10002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
TF_AP-2
DUF2730
Syndetin_C
DUF4763
Filament
DUF7201
Vps54_N
Motif
Other DBs
NCBI-GeneID:
8583666
NCBI-ProteinID:
XP_002641672
WormBase:
CBG10002
UniProt:
A8XA53
LinkDB
All DBs
Position
III:9306565..9309187
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AA seq
768 aa
AA seq
DB search
MEEPNDLNLSDTVMSEIKGMCVTEYSKPNMSLIAQINELFPTEQSLTQLDSVIAAVEGEI
GELDNELAYLVETNANVSERGEEALKHAQKAMVELEKSIGSIRERTKSSDEIVREMTRDI
KQLDIAKRNLTASITTLHHLHILLTGVESLGAWVEKKDYSSIARQLPAILNVLQLFDAYK
ESEQIANLSEQLDKFKSSLTIQLARDLKNAFQTGQLSDRITDMCRVAAALEGNVKENFVK
WFIEQQLSEYCIIYADNEEGAWLDKVDDRYKWFVRKLTDFERAGLSNIFPNDWHMGRRLT
SEFCIVTRDILYRIMTRRRQDLDWKLLGHAIQHTKMFEALLTKRFPEKDGISFEKTIWSV
FDPFLDVFINAQEKTLNEFLDTCASKIRSGEEKPTRESSTHAVPFPSSADMFLLLKKVIT
ESSKLSSEPDALIRDVIGVVRVCLRGYATSCLIAFLPSLGSQQSGAANLFSLIREEVAYP
RLTPDQQFLVCCILATADWCAETSIQLQEKLAQRIPGVDITQETEAFYSITNQSLLVLVQ
DVESTCDAALQSISKVNWSSVDCVGDESPFIGAMRAHLRQAVPLVRDMLSDRRKYFAHFC
LKLATQLAHKFVGSLFRCRAISTHGAEQLLLDTHSLKTFLLSVPSIDSVINSKPPTAYVT
SVNAALTKAEMILKFGYGFSTVEQYIKLLPASDAAEMQNVLEMKGVKRQEHSSVLNTYRA
LPTVGSAASVSEAFNAVLSLAADGLSDQTVTSSIDKLKRFERLVKRQL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaccgaatgatttaaatctctccgataccgttatgagtgaaataaaaggcatg
tgcgtcacagaatatagtaaaccaaatatgagcttgattgcccaaattaacgaactcttc
ccaactgagcaatcacttactcaacttgattctgtaatagctgcagtagaaggcgagata
ggcgagttggacaatgagttggcttatctagtggagacgaatgccaatgttagtgaaaga
ggagaagaggctttaaaacatgcacaaaaagcgatggtagaactggaaaagagtataggc
agtatacgagaaagaacaaagtcatcagatgagatcgttcgagagatgacaagagacatc
aaacaactagacattgccaaacgaaacttgacggcttccataacaactttacatcatctt
catatcctattaactggagtggaatctctcggagcttgggtggagaagaaagattatagt
tctattgctagacagcttcctgctattctgaatgttcttcaattgtttgatgcatacaaa
gaatcagaacagatcgctaatctttccgaacaactagataaatttaaatctagtctaaca
attcaactggctagagatctgaagaatgcattccagactggacagctcagtgatcgaatt
actgatatgtgtagagtagcagctgcactggaaggaaacgtaaaagaaaactttgtcaaa
tggttcatcgaacaacagctcagtgaatactgtatcatttatgctgacaatgaagaagga
gcttggctggataaggttgacgacagatacaaatggttcgtgaggaaactgacggacttt
gagcgagcaggactatcgaatattttcccaaatgattggcatatgggaagacgactaaca
agcgagttttgtattgtaacaagagacattctctatagaataatgacaagaagaaggcag
gatctggattggaaattactaggacatgctattcaacacaccaaaatgttcgaagctctc
ctcacaaaacggttcccagaaaaagatgggatatcgtttgaaaaaacaatttggagtgtt
tttgaccccttccttgatgtgttcataaatgcccaagaaaaaacactcaacgaatttctg
gatacctgtgcaagcaaaatacgatcaggggaagaaaaaccaacccgggaatcgtctaca
catgctgtaccgtttccgtcctcagctgatatgttccttctcttgaaaaaggtaattacg
gaatcaagcaagttgagcagtgagccagatgctttgataagggatgtcatcggtgtagtt
cgggtgtgtcttcgtggctatgcaacatcatgtctgatcgcatttctgccatcactgggt
tcacaacaatctggagctgccaaccttttcagtctgatcagagaagaagtcgcctatcca
aggctgactcctgatcaacaatttcttgtttgctgcattctggcaacagcagattggtgt
gcagagacatcgattcagctacaggaaaagttggcacagaggataccaggcgttgatatc
actcaagaaaccgaagcattttattctatcactaatcaatctttattggttttagtacaa
gatgtagagtctacctgtgatgctgctctacaatcaattagtaaagtcaactggagttca
gtagactgtgttggtgacgagtctccttttattggagcaatgcgagctcatcttcgacaa
gctgttcctttagttcgtgacatgctatctgatcgtcgtaaatacttcgctcacttctgc
ctgaagctagctactcaactggctcacaagtttgttggatctttgttccgatgtcgtgcc
atcagtacccatggtgccgaacaactattacttgatactcattcattgaagacgttttta
ttgagtgtcccttctattgatagtgtcataaattcgaaaccaccaactgcctacgttaca
agtgtgaatgcagccttgaccaaagctgaaatgattctgaagtttggatacggttttagt
actgtggagcaatacatcaagttgctcccagcttctgatgcagctgaaatgcagaacgtt
cttgaaatgaaaggagtcaaaagacaagagcattcatcggttctcaacacctaccgagct
cttccaaccgttggaagtgcggcatctgtatctgaagcattcaatgctgtactttcattg
gctgccgatggactatcagatcaaactgtgacgtcttctatcgacaaactcaaacgattc
gaaagactagtcaaacgacaattgtga
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