Caenorhabditis briggsae (nematode): CBG_10063
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Entry
CBG_10063 CDS
T01054
Name
(RefSeq) Protein CBG10063
KO
K12821
pre-mRNA-processing factor 40
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_10063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_10063
Spliceosome [BR:
cbr03041
]
Complex A
U1 snRNP components
U1 related factors
CBG_10063
Complex B
CBG_10063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
DTW
Motif
Other DBs
NCBI-GeneID:
8583720
NCBI-ProteinID:
XP_045094191
WormBase:
CBG10063
UniProt:
A8XAA7
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All DBs
Position
III:complement(9520784..9524284)
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AA seq
717 aa
AA seq
DB search
MIPNGFPFINPNLMAAANIQQQILLQQRVAMSGAGGIPQIPMIPMPAHSAVAAHAAAAAA
AVAAPTRPSPMLVPPGMGMEDSTASPAESEWSEHPHTDGRSYYYNKITKQSSWVKPDALK
TPQERAASAKQAQQSVWKEFEADGKPYYYNTITKKTQWVKPEGEIITSKYSLTIFFHKFY
VSEHEQQQKTTTTTTTSVTIDTNALAAAVQQKKAESDLDKAMKATLAAMPNVPLPSEKKE
DDTQVNDEVELKKRQSERFRDLLRDKYNDGKITTSCNWDQAVKWIQNDPRFRILNKVSEK
KQLFNAWKVQRGKEERDEKRLAIKKSKEDLEKFLQEHPKMKESLKYQKACEMFAKDPLWM
AVNDEDRKEIFKDCIGFVVRRDKERKEQCRTRNLAAFSHILQSMDQIIYNTTWAQAQRML
IENPQFAGDTNLQLMDKEDALSVFEEHIKQAEKEHDEEKEQEEKRLRRQHRKTREEYLLL
LAGLHKRGEITSMSLWSSLFPIISTDTRFEHMLLQPGSSPLDLFKFFVEDLKEQYIEDRR
LIKDIMTEKDLHIIATTDFKEFSEWIMSHPKGEKVDQGNMKLCYNSMVEKAENKAKDEEK
ELVRRKRRLESEFRNLLKAHNVDQSSEWAVIKPKLEQEKAYLALENDEEREDAFNHYKNG
TAGPYTLDVLEKKKKKKDKKKKSKRSDSRRSRKRSHSHTDSPRHSSDKRKRQESETD
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgataccaaatggttttccatttatcaatccgaatctcatggcagcagctaacattcag
cagcaaattcttttacagcagagagtagccatgtcaggagctggcggaattccacaaatt
cctatgatcccgatgccagctcatagtgccgtggctgcgcacgcagcggcagcagcagct
gctgttgcagctccaaccagaccgtctccaatgctagtccctccaggaatgggaatggaa
gattcgacagcgtcaccggctgaatcagagtggtcggaacatccacacaccgatggacga
agctattactacaacaaaataacaaagcagtcgtcttgggtgaaaccagatgctcttaaa
acaccccaggagagagccgcaagtgcgaaacaagcccagcaaagtgtttggaaagagttc
gaagccgatggaaaaccttactattacaacacaattactaagaaaacgcaatgggttaaa
ccagaaggagaaattatcacaagtaagtattctctaaccattttttttcacaaattttac
gtttcagaacacgagcaacagcagaaaacaacgactacgacaaccacctctgtcaccatt
gacaccaacgccctcgctgcggctgttcaacaaaaaaaagccgaatccgatttggacaaa
gccatgaaagctactttagctgctatgcctaatgttcctctaccatcggagaagaaggaa
gatgacacacaagttaacgatgaagtcgaattgaagaaaaggcaatcggaacggttccgt
gatttactacgagataaatacaacgatggaaaaatcactacaagctgcaattgggatcaa
gccgttaaatggattcagaatgatccacgtttccgaatcttgaacaaggtttcggaaaag
aagcaactgttcaacgcctggaaagttcagcgaggaaaagaagaacgagatgaaaaacgt
ttggcgatcaaaaaatcaaaagaagatttggaaaagtttttgcaagaacatccaaaaatg
aaggagagtttgaagtatcaaaaagcatgcgagatgtttgccaaggatccattgtggatg
gctgtgaatgatgaagataggaaagagattttcaaagattgcattggctttgttgttcga
cgcgacaaagagaggaaggaacaatgtcgtactcgcaatctagcggcattcagtcatatt
ctacaaagtatggaccagattatctataacacgacttgggcacaagctcaacggatgctc
attgaaaatccacaattcgccggagacacaaatcttcagttaatggataaggaagatgct
ctcagcgttttcgaggaacatataaagcaagccgagaaagagcacgacgaggagaaggaa
caggaagaaaaacgattgcgtcgacaacaccgaaagactcgcgaagaataccttttgctt
cttgctggtctacacaaaagaggagaaataacatcaatgtctctgtggtcgtccttgttc
cctatcatttctactgatactcgttttgaacacatgcttttacaacctggatcttcacca
ctggatcttttcaaattctttgtagaggatctcaaggagcaatacatagaagatcgtagg
ctgattaaggacattatgaccgaaaaagacctccacatcattgcgacaacagattttaag
gaattttctgagtggattatgagccatccaaaaggagagaaagtcgatcagggaaacatg
aagctctgttacaattcaatggtcgagaaggctgaaaacaaagcaaaagacgaggagaag
gagttggtgagaaggaagcgaagattggaaagtgaatttagaaaccttctcaaagctcac
aacgtggatcaatcttctgaatgggctgttatcaagccaaaattagagcaagagaaggct
tatctggccctggaaaatgacgaggagcgagaagatgctttcaatcattacaaaaatgga
acagctggaccttatactttggatgttttggagaagaaaaaaaagaagaaggataagaag
aagaagagtaaaagaagtgattctcggagatcaagaaagcgcagccattcccacactgat
tctcctcgtcactcatctgataaacgtaaaagacaagaatctgaaacagattaa
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