KEGG   Caenorhabditis briggsae (nematode): CBG_10067
Entry
CBG_10067         CDS       T01054                                 
Symbol
Cbr-clu-1
Name
(RefSeq) Protein CBR-CLU-1
  KO
K03255  protein TIF31
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:cbr03012]
    CBG_10067 (Cbr-clu-1)
Translation factors [BR:cbr03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    CBG_10067 (Cbr-clu-1)
SSDB
Motif
Pfam: CLU eIF3_p135 TPR_12 CLU_N GSKIP_dom TPR_10 TPR_NPHP3
Other DBs
NCBI-GeneID: 8583722
NCBI-ProteinID: XP_045094192
WormBase: CBG10067
LinkDB
Position
III:9530019..9534056
AA seq 1262 aa
MTSGSELKAEVDAPVVNGKDELVHEEDNNDSGHSSINTPDASEDKQTDKLVKVTIQPSCG
EAFDLHLSDNELVQELYQTLLDREATCHRTCFSLYLNGTAVDNYSEVRSVPGFIDGCTLN
VVDEPYTVRDARLHLRQVRELLRFGLVQDQHEPPCGNEAQSYLASIDLNPSEKKESKQSD
ILPPDYVLPGCKERSLAHLVVPQQKELIAVKDIAFSPFNPPPGPRKLRGDVLYIDVTTVE
NRVYHLTCCTRGFYVNNSQEQKFDPTISNANKTIYQSVIELLQNVSPGFKKVYPQILKRR
VEKSLVERLPTSYPVSTWVASPLKPDNYSSDSLRAIELIEPFRVGFEDHMPGLLRDWNEE
LQTTFEMPRKSLAERAVRDRSYYKIHADYVNAAAKGVQSILDGNILAINPGEDKKTHMYI
WNNIFFSLGFDVRDHYKELGGDAAAFAATSTDLQGVRAFATLEDPKLNTLGMAIFDYRGY
RVTAQSIIPGILEREQEQSVVYGSIDFGKTVVSDEKYHALLEDAAQQLKMLPHNVISVKD
GVEQELKLFTSYEAKGIVGNDGRKYVLDLLRSMPPDVHYLEDAEVSETAKDLGYPRKFPH
KLSALRRELVDQFCESRLVMFIQSTARKIRALITEAKEKNDEELIKQAAEAESELSLVFV
AVSEDREIETKNKIVQDAIKEACAEIHSIYEDRFVIKFNPDCFSPNVKHAPSENLERQRR
VVIDAAEYLLTNQIPEIVQSFKDCTVQPIDGNNLADILHSKGINIRYLGEIGKRVQDTNS
FARPLVLSDIVARSAKHVIRKINVQTPVDQLVVSTSHILNCLFSTVSEPSPVASHAHKKS
SKKNGKKKNSGVWATLTTASLWKSICEESAYYYGYHIDTETLDKFLEQHEIQKTALFRRV
VKIMGVQIVARDYQLDSSAKKVAAFTEDDIINFYPIIKHHQPFTVDAKKMIIRGQHAMSL
GASREAYECISEAINIMTAVYGVMHPDMPQCLRALARLGHVLGETPDALNHQHKATVMSE
RLIGLDSGNTIIEYNSLIHYLLICFQINLAHFAFGALLIPGSLRPLYRARYLMNLVFGEK
HPIMAQIDANIGTILFTIQEYDTALKYLQSADAISKAIGEPRKLKTGLISNLIARTHAAR
GDFRAALVAEKETSSIYTELYGKNHQRVKDSGEYLRTLTQQAVTFQKKMLNPDNNTNINE
LFQIQPPPISALFDILNIINGIMIIGIPGLSNLAALEKEQIGTAEESKATDVAAQLDNET
LD
NT seq 3789 nt   +upstreamnt  +downstreamnt
atgacttcgggttccgaattgaaagctgaggttgacgcaccagtcgtcaacggaaaagac
gaattggtccacgaagaagataacaacgattcgggtcattcgtctatcaacactccagat
gcctcagaagacaaacaaactgacaagctcgtgaaagtgacaattcaaccttcttgcggc
gaggctttcgatcttcatctcagtgacaatgaactagttcaagaactttatcaaacgttg
ctggatcgagaagccacttgtcatagaacttgtttttcgctctatttgaacgggactgct
gttgataactattcagaagttcggtctgttccgggttttatcgatggatgtactctcaat
gttgttgatgagccatacaccgttcgtgatgctcgacttcatctacgccaagttcgcgaa
cttctgagatttggccttgttcaggatcaacacgagcctccatgcggaaacgaagctcaa
tcttatctagcttctattgacttgaatccaagcgagaaaaaagagtcaaaacaatctgat
attcttcctccggattatgttctcccaggatgcaaagaacgctctcttgcccatctcgtc
gttccgcaacagaaggagcttatcgccgtgaaggatattgcattctctccattcaaccca
ccaccaggaccacggaagctgagaggagacgttctgtatatcgatgtgacaactgttgag
aaccgtgtctaccacctgacatgctgtactagaggattttatgtcaacaactcacaagaa
caaaaattcgatccaaccatttccaatgccaacaaaacgatctaccaaagtgtgattgaa
cttcttcaaaacgtcagtcccggatttaagaaagtatatccgcaaatcttgaaaagaaga
gtggagaagtctcttgttgagcgccttccaacaagttatccagtttctacatgggtcgct
agtccactgaagccggataactattccagtgattcgcttcgtgcgattgaactcatcgag
ccgttccgcgtaggatttgaggatcacatgcctggtctcctccgtgattggaatgaagaa
ctacagacaacttttgagatgcctcgcaagtctcttgccgagagagctgttcgcgatcgt
agctattacaagattcatgctgattacgtcaatgctgcagccaaaggtgttcaatcaatt
ctggatggaaatatattggcaatcaacccaggagaagacaagaaaacccatatgtacatt
tggaacaacattttcttcagtcttggattcgatgtgagagatcactacaaagaactagga
ggagatgcagctgcgttcgcagccacgtctactgatctacaaggagtccgtgcgttcgct
actctcgaagatccaaagttgaatacacttggtatggctattttcgactatagaggttat
cgtgttactgctcaatcaattattcctggaattcttgaacgcgaacaggaacaatcagtt
gtgtatggatcgattgatttcggaaaaactgttgtctcggatgaaaagtaccacgctttg
ctggaagacgctgctcagcaactgaagatgcttccacacaatgttattagtgttaaggac
ggagtggagcaagaattgaaactcttcactagctacgaagctaagggaattgttggaaac
gacggaagaaaatacgttttggatcttctccgctcaatgcctccagatgtccattacttg
gaagatgccgaagtttccgagactgcaaaggacctcggatatccacgcaagttcccacac
aaactttctgctcttcgtcgtgagttggtggatcaattctgcgagtctagacttgtgatg
ttcatacaatcaacggcaagaaagattcgtgctcttattactgaagcgaaggagaagaac
gatgaagaactgataaaacaagcagctgaagcagaaagtgagctttcactggttttcgtg
gctgttagcgaagatagggaaatcgaaactaagaataagattgtccaggacgccatcaag
gaggcgtgcgcggaaattcattccatctatgaagatcgcttcgtaatcaaattcaatcca
gattgtttctcgcctaatgtgaagcatgctccaagcgaaaacttggaacgtcaacgccga
gttgttattgatgccgccgagtaccttctcactaatcaaattcctgaaattgtacaaagc
ttcaaggattgcaccgtgcaaccaattgacggaaacaatctcgctgatattctgcactcg
aaaggaatcaatattcgttacctgggagaaatcgggaaacgcgttcaagatacgaactct
ttcgctcgtccactcgttctctcggacatcgttgcccgttcagcgaagcacgttattcgc
aagatcaatgttcaaactccagttgatcagttggttgttagtacttcgcacattctcaac
tgcctgttctctactgtttctgagccaagccctgtggcttcgcatgcgcataagaagagt
agcaagaagaacggtaagaagaagaattctggagtgtgggcaacgctgacaactgcatca
ttgtggaagagcatttgcgaggaatctgcgtattactatggatatcatattgatacggaa
actcttgacaagttcctcgagcaacatgagattcaaaaaactgctctcttccgtcgcgtt
gtcaagattatgggagttcaaatcgttgccagagattatcaactcgattcctcggcgaaa
aaagttgctgctttcactgaagacgacatcattaacttctatccaataataaaacaccac
caacctttcacagttgatgccaagaagatgataattcgtggacaacatgctatgtctctc
ggtgcatcccgtgaagcttatgaatgcatatcagaggctataaacatcatgactgctgtt
tacggtgttatgcatccagacatgcctcaatgtttgagagcgttggcaagactgggacat
gttcttggagagacacctgatgctctcaaccatcaacacaaagcaaccgttatgagtgaa
cgattgatcggtttagattccgggaacaccatcattgaatacaattccctcattcattat
cttttaatatgttttcagatcaatctggctcatttcgcgttcggtgcacttctcattcca
ggctctctccgtcctctttaccgcgctagatacctcatgaacctcgtcttcggagagaaa
caccctattatggctcaaattgatgccaacattggaacgattttgttcaccatccaagaa
tatgacacagcgctcaaataccttcaatcagctgacgccatcagcaaagctattggggaa
ccaagaaagctgaagaccggactgatctcgaatttgattgcaaggacacatgccgctcgt
ggtgatttccgtgctgctctcgttgcggagaaagagacgtccagcatttatactgagctg
tatggaaagaatcatcaaagagtaaaggattctggagagtacctccgtactctgacccaa
caagctgttacattccaaaagaaaatgcttaacccagacaataacacaaacataaacgag
ttgttccagatccaacctccaccaatcagtgcactttttgatattttgaatatcatcaac
gggataatgataatcggaattccaggactgtccaatttagcggcactggaaaaagaacaa
atcggaactgctgaagagagcaaagccactgatgtcgctgctcaactagacaatgaaacc
ttagactag

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