Caenorhabditis briggsae (nematode): CBG_10243
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Entry
CBG_10243 CDS
T01054
Name
(RefSeq) Protein CBG10243
KO
K21123
serine/arginine-rich splicing factor 9
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_10243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_10243
Spliceosome [BR:
cbr03041
]
Common components
Common spliceosomal components
SR proteins
CBG_10243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
8573975
NCBI-ProteinID:
XP_002631976
WormBase:
CBG10243
UniProt:
A0AAE8ZUX1
A8XAS1
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Position
X:complement(<20670925..>20672424)
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AA seq
387 aa
AA seq
DB search
MSQPKKSYSHIEGRIFLGNLPTDIDEDLLRDFFKTSGEIKYIDVKKGKAGRPGYGFMEFV
KLEDAEKAVKTRNGFPICDKFIRVEFSTSGGPRGPGGMVLREGEISEEYSVARGRGGPQL
RSVHRVYVDNCPPSTTWQDIKDLFRGKNDPTGIEVCFSAINPIQRRAFVEFRLKEDVAKA
IRLFHNKPYINYRNEESVLSIYEDPGNAALNKENNVPTIRISSENEKTSEKTGPNPDAIS
SEASPSSSTSGRSTSSSPAYSSDSDNDDTLAASPSKSQEIPEHRPTISSATSIPEAPEPL
PRSSKRSRTLSTPAVPTVLNQGPPKAKRPAPDHSGLSATTNESPNEESTPSNAAVPEETE
STDDEEYYEFSIPLDVFDEENLLFRFC
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaccgaaaaagtcttattcgcacatcgaaggtcggatctttcttggtaacctg
cctacagacatcgatgaagacttgctgagagatttcttcaaaaccagcggggaaatcaag
tatatcgatgtcaagaaggggaaagcgggccgtccaggatatgggttcatggagtttgtc
aaacttgaagatgccgaaaaagctgtaaagacgcgcaacggctttccaatctgtgataaa
tttattcgggttgagttctcgacaagtggtggaccacgtggtcctggtggcatggttctc
cgtgaaggagaaatcagtgaagaatacagtgttgcacgtggtcgtggaggtccgcagtta
agatccgttcatcgcgtttacgtcgacaattgcccaccgtctactacctggcaagatata
aaagatcttttccgtggaaaaaatgatcctactggcatagaagtctgtttctccgctatc
aatccaattcaacgaagagcttttgttgaatttcgtttgaaagaagatgtagccaaggca
atacgcctcttccacaacaagccttacataaactatcggaacgaggaaagcgtattatca
atttatgaagatccaggcaatgcagccttaaacaaagaaaacaacgttccaaccatcagg
atatcatcagaaaacgagaagacatcagaaaaaactggtccgaacccagatgcaatttct
tcggaagcaagtccatcgtcttctactagcgggcgttcaacatcttcatcaccagcgtac
tcttccgattccgataatgatgatactctagctgcatctccctcaaaatctcaagaaatt
ccggaacacagaccgactatttcatccgccacgtctataccggaagcaccggagccccta
ccgcgaagctcaaaacgttctcgaacgctatcgacacctgcagttccgactgtgctgaat
caaggacctccaaaagccaaaagacccgctccggaccattcaggcttatctgcaacaacc
aacgagtctccaaacgaagaatccacaccttcaaatgcagcagtacctgaggaaacagag
tcaacagatgatgaggagtattatgagttttccataccactagatgtgtttgatgaggaa
aacttgctgttcagattctgctag
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